RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 KRT10P13645 584 aa7.46□□□□□ -1.22
SRGAP1-206ENST00000543397 TKFCQ3LXA3 575 aa7.46□□□□□ -1.22
SRGAP1-206ENST00000543397 MB21D2Q8IYB1 491 aaPredicted RBP7.46□□□□□ -1.22
SRGAP1-206ENST00000543397 KRT222Q8N1A0 295 aa7.46□□□□□ -1.22
SRGAP1-206ENST00000543397 PPP2R3CQ969Q6 453 aa7.46□□□□□ -1.22
SRGAP1-206ENST00000543397 ZNF653Q96CK0 615 aa7.46□□□□□ -1.22
SRGAP1-206ENST00000543397 EPSTI1Q96J88 318 aa7.46□□□□□ -1.22
SRGAP1-206ENST00000543397 KIAA1586Q9HCI6 787 aa7.46□□□□□ -1.22
SRGAP1-206ENST00000543397 ADARB2Q9NS39 739 aaKnown RBP7.46□□□□□ -1.22
SRGAP1-206ENST00000543397 NYAP2Q9P242 653 aa7.46□□□□□ -1.22
SRGAP1-206ENST00000543397 PCDHA10Q9Y5I2 948 aa7.46□□□□□ -1.22
SRGAP1-206ENST00000543397 ESYT2A0FGR8 921 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 H7C0C1 242 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 TBC1D8O95759 1140 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 KRT15P19012 456 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 ARL4AP40617 200 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 ATP5OP48047 213 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 KCNJ6P48051 423 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 SESN3P58005 492 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 CUL4AQ13619 759 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 OR6B2Q6IFH4 312 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 GRAMD1CQ8IYS0 662 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 TDRD7Q8NHU6 1098 aaKnown RBP7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 MYO3AQ8NEV4 1616 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 KIDINS220Q9ULH0 1771 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 DYNC1LI2O43237 492 aaPredicted RBP7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 CTNND1O60716 968 aaKnown RBP7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 HUS1O60921 280 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 SLC25A27O95847 323 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 VPS41P49754 854 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 PAK2Q13177 524 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 ORC2Q13416 577 aaPredicted RBP7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 SETDB1Q15047 1291 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 DNAJC24Q6P3W2 148 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 INTS5Q6P9B9 1019 aaKnown RBP7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 GPRC5AQ8NFJ5 357 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 SAMD15Q9P1V8 674 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 SLC9A2Q9UBY0 812 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 ZNF148Q9UQR1 794 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 CPS1P31327 1500 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 H0YC42 278 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 BUB1O43683 1085 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 LARGE1O95461 756 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 RRM1P23921 792 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 EPHX2P34913 555 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 HDLBPQ00341 1268 aaKnown RBP7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 LRRC63Q05C16 580 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 BAATQ14032 418 aaPredicted RBP7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 CEP55Q53EZ4 464 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 FBXO33Q7Z6M2 555 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 CEP57Q86XR8 500 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 PALM2Q8IXS6 379 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 BEST2Q8NFU1 509 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 SGSM3Q96HU1 749 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 DYDC2Q96IM9 177 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 NUDT12Q9BQG2 462 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 SCAF8Q9UPN6 1271 aaKnown RBP7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 SAR1BQ9Y6B6 198 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 MST1RQ04912 1400 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 GOLGA8CPA6NN73 597 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 DPYSL4O14531 572 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 COBLO75128 1261 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 CIITAP33076 1130 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 PRPSAP1Q14558 356 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 MESDQ14696 234 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 KAZNQ674X7 775 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 TRIM68Q6AZZ1 485 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 INTS8Q75QN2 995 aaKnown RBP7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 KATNAL1Q9BW62 490 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 RABEP2Q9H5N1 569 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 CXorf56Q9H5V9 222 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 HAUS4Q9H6D7 363 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 PIDD1Q9HB75 910 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 MRPL47Q9HD33 250 aaKnown RBP7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 JPH1Q9HDC5 661 aaPredicted RBP7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 UBE2TQ9NPD8 197 aaPredicted RBP7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 LMCD1Q9NZU5 365 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 SMAPO00193 183 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 KRIT1O00522 736 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 ADCY8P40145 1251 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 STAT5BP51692 787 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 SBK1Q52WX2 424 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 TMEM260Q9NX78 707 aa7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 RABL2AQ9UBK7 228 aaPredicted RBP7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 IPO11Q9UI26 975 aaKnown RBP7.45□□□□□ -1.22
SRGAP1-206ENST00000543397 GGPS1O95749 300 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 USP11P51784 963 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 ZNF543Q08ER8 600 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 HDXQ7Z353 690 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 VPS52Q8N1B4 723 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 SKA2Q8WVK7 121 aaPredicted RBP7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 KRT12Q99456 494 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 LXNQ9BS40 222 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 CARD6Q9BX69 1037 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 VTI1BQ9UEU0 232 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 GDAQ9Y2T3 454 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 HYOU1Q9Y4L1 999 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 MAPK4P31152 587 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 SCN4BQ8IWT1 228 aa7.44□□□□□ -1.22
SRGAP1-206ENST00000543397 CCNYQ8ND76 341 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms