RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 UBIAD1Q9Y5Z9 338 aa10.83□□□□□ -0.68
SS18-205ENST00000542420 NPHP3-ACAD11A0A0J9YXS1 232 aa10.82□□□□□ -0.68
SS18-205ENST00000542420 RCCD1A6NED2 376 aa10.82□□□□□ -0.68
SS18-205ENST00000542420 WNT10BO00744 389 aa10.82□□□□□ -0.68
SS18-205ENST00000542420 HOXD13P35453 343 aa10.82□□□□□ -0.68
SS18-205ENST00000542420 CXCL9Q07325 125 aa10.82□□□□□ -0.68
SS18-205ENST00000542420 GLE1Q53GS7 698 aaKnown RBP10.82□□□□□ -0.68
SS18-205ENST00000542420 NELFCDQ8IXH7 590 aa10.82□□□□□ -0.68
SS18-205ENST00000542420 SPICE1Q8N0Z3 855 aa10.82□□□□□ -0.68
SS18-205ENST00000542420 DYDC2Q96IM9 177 aa10.82□□□□□ -0.68
SS18-205ENST00000542420 RUSC1Q9BVN2 902 aa10.82□□□□□ -0.68
SS18-205ENST00000542420 VEZTQ9HBM0 779 aa10.82□□□□□ -0.68
SS18-205ENST00000542420 DMAC2Q9NW81 257 aa10.82□□□□□ -0.68
SS18-205ENST00000542420 ZNF536O15090 1300 aa10.82□□□□□ -0.68
SS18-205ENST00000542420 ZMYM2Q9UBW7 1377 aa10.82□□□□□ -0.68
SS18-205ENST00000542420 GRID2IPA4D2P6 1211 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 PMM2O15305 246 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 P4HA2O15460 535 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 PPP1R37O75864 691 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 P4HBP07237 508 aaKnown RBP10.81□□□□□ -0.68
SS18-205ENST00000542420 TNFRSF8P28908 595 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 PSEN1P49768 467 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 OAZ1P54368 228 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 SNAP25P60880 206 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 NAB2Q15742 525 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 EXOC3L4Q17RC7 722 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 KLHDC7AQ5VTJ3 777 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 HS2ST1Q7LGA3 356 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 JDP2Q8WYK2 163 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 HVCN1Q96D96 273 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 IWS1Q96ST2 819 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 TMEM39BQ9GZU3 492 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 TSPYL1Q9H0U9 437 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 TAOK3Q9H2K8 898 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 TMEM206Q9H813 350 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 SLC38A10Q9HBR0 1119 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 JADE2Q9NQC1 790 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 TRIM10Q9UDY6 481 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 CCPG1Q9ULG6 757 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 L1RE1Q9UN81 338 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 PCDHGC5Q9Y5F6 944 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 A0A0A6YYK5 440 aaPredicted RBP10.81□□□□□ -0.68
SS18-205ENST00000542420 IPO5O00410 1097 aaKnown RBP10.81□□□□□ -0.68
SS18-205ENST00000542420 NKRFO15226 690 aaKnown RBP eCLIP10.81□□□□□ -0.68
SS18-205ENST00000542420 MAFGO15525 162 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 GCNT3O95395 438 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 CCDC172P0C7W6 258 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 MYBP10242 640 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 FERP16591 822 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 ABCD1P33897 745 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 CASP5P51878 434 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 POLR2FP61218 127 aaKnown RBP10.81□□□□□ -0.68
SS18-205ENST00000542420 DCAF15Q66K64 600 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 CCDC174Q6PII3 467 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 ZNF720Q7Z2F6 126 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 VPS36Q86VN1 386 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 SMCR8Q8TEV9 937 aaPredicted RBP10.81□□□□□ -0.68
SS18-205ENST00000542420 CLEC4DQ8WXI8 215 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 FIZ1Q96SL8 496 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 UNC45AQ9H3U1 944 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 ZSWIM4Q9H7M6 989 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 TBC1D7Q9P0N9 293 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 NENFQ9UMX5 172 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 USP20Q9Y2K6 914 aa10.81□□□□□ -0.68
SS18-205ENST00000542420 COL11A1P12107 1806 aaPredicted RBP10.81□□□□□ -0.68
SS18-205ENST00000542420 TLR2O60603 784 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 N4BP1O75113 896 aaKnown RBP10.8□□□□□ -0.68
SS18-205ENST00000542420 SCP2P22307 547 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 SFNP31947 248 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 JAK3P52333 1124 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 NPEPPSP55786 919 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 JAM2P57087 298 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 KLHL30Q0D2K2 578 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 RASA3Q14644 834 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 TDRD12Q587J7 1177 aaKnown RBP10.8□□□□□ -0.68
SS18-205ENST00000542420 SLC35C1Q96A29 364 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 C12orf42Q96LP6 360 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 TEPSINQ96N21 525 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 SENP7Q9BQF6 1050 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 ZHX3Q9H4I2 956 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 AS3MTQ9HBK9 375 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 ARHGEF35A5YM69 484 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 TGFB1I1O43294 461 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 DKC1O60832 514 aaKnown RBP eCLIP10.8□□□□□ -0.68
SS18-205ENST00000542420 AKAP3O75969 853 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 PRPF6O94906 941 aaKnown RBP10.8□□□□□ -0.68
SS18-205ENST00000542420 PLEKP08567 350 aaPredicted RBP10.8□□□□□ -0.68
SS18-205ENST00000542420 UCHL3P15374 230 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 PON1P27169 355 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 CYP27A1Q02318 531 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 TKFCQ3LXA3 575 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 DALRD3Q5D0E6 543 aaKnown RBP10.8□□□□□ -0.68
SS18-205ENST00000542420 SMYD5Q6GMV2 418 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 TPH2Q8IWU9 490 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 MYCT1Q8N699 235 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 CYP2W1Q8TAV3 490 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 KCNN1Q92952 543 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 EEF2KMTQ96G04 330 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 RGL1Q9NZL6 768 aa10.8□□□□□ -0.68
SS18-205ENST00000542420 LARSQ9P2J5 1176 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms