RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 TTC12Q9H892 705 aaPredicted RBP10.95□□□□□ -0.66
YBX3-212ENST00000542002 AGO3Q9H9G7 860 aaKnown RBP10.95□□□□□ -0.66
YBX3-212ENST00000542002 NRBP2Q9NSY0 501 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 TCEAL9Q9UHQ7 104 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 PCDHA12Q9UN75 941 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 SMC3Q9UQE7 1217 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 YBX2Q9Y2T7 364 aaKnown RBP10.95□□□□□ -0.66
YBX3-212ENST00000542002 PCDHB6Q9Y5E3 794 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 CDY2AQ9Y6F7 541 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 SLC4A7Q9Y6M7 1214 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 SCN5AQ14524 2016 aa10.95□□□□□ -0.66
YBX3-212ENST00000542002 TRIP12Q14669 1992 aaPredicted RBP10.95□□□□□ -0.66
YBX3-212ENST00000542002 DDX11L8A8MPP1 907 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 MARCH6O60337 910 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 BAG4O95429 457 aaKnown RBP10.94□□□□□ -0.66
YBX3-212ENST00000542002 PARNO95453 639 aaKnown RBP10.94□□□□□ -0.66
YBX3-212ENST00000542002 GHRP10912 638 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 ATP2A2P16615 1042 aaKnown RBP10.94□□□□□ -0.66
YBX3-212ENST00000542002 QARSP47897 775 aaKnown RBP10.94□□□□□ -0.66
YBX3-212ENST00000542002 NPEPPSP55786 919 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 WDR5P61964 334 aaKnown RBP10.94□□□□□ -0.66
YBX3-212ENST00000542002 PSMC5P62195 406 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 MRPS6P82932 125 aaKnown RBP10.94□□□□□ -0.66
YBX3-212ENST00000542002 CTTNQ14247 550 aaKnown RBP10.94□□□□□ -0.66
YBX3-212ENST00000542002 IL17AQ16552 155 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 FBXO47Q5MNV8 452 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 TTC38Q5R3I4 469 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 LARP1BQ659C4 914 aaKnown RBP10.94□□□□□ -0.66
YBX3-212ENST00000542002 PLA2G4FQ68DD2 849 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 NCAPH2Q6IBW4 605 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 EFCAB12Q6NXP0 572 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 CNKSR3Q6P9H4 555 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 RTN4RL1Q86UN2 441 aaPredicted RBP10.94□□□□□ -0.66
YBX3-212ENST00000542002 LRRC71Q8N4P6 559 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 DEFB123Q8N688 67 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 METTL13Q8N6R0 699 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 TMEM40Q8WWA1 233 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 TNPO1Q92973 898 aaKnown RBP10.94□□□□□ -0.66
YBX3-212ENST00000542002 FAM161BQ96MY7 647 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 SEMA6BQ9H3T3 888 aa10.94□□□□□ -0.66
YBX3-212ENST00000542002 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.94□□□□□ -0.66
YBX3-212ENST00000542002 COL1A2P08123 1366 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 TET1Q8NFU7 2136 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 ABHD14A-ACY1A0A1B0GW23 586 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.93□□□□□ -0.66
YBX3-212ENST00000542002 POTEMA6NI47 508 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 GPR32O75388 356 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 ARHGEF15O94989 841 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 SLC34A2O95436 690 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 VTNP04004 478 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 P4HBP07237 508 aaKnown RBP10.93□□□□□ -0.66
YBX3-212ENST00000542002 SPATA31C1P0DKV0 1188 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 ACTN1P12814 892 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 DNAJB2P25686 324 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 TECP42680 631 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 CLCN3P51790 818 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 CYP4A11Q02928 519 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 IKBKEQ14164 716 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 XKR3Q5GH77 459 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 MCTP1Q6DN14 999 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 TPH2Q8IWU9 490 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 NME8Q8N427 588 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 SNX21Q969T3 373 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 FAM167AQ96KS9 214 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 PPP1R16BQ96T49 567 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 EIF2AK1Q9BQI3 630 aaKnown RBP10.93□□□□□ -0.66
YBX3-212ENST00000542002 CELF4Q9BZC1 486 aaKnown RBP10.93□□□□□ -0.66
YBX3-212ENST00000542002 ADAMTS10Q9H324 1103 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 MTMR10Q9NXD2 777 aa10.93□□□□□ -0.66
YBX3-212ENST00000542002 CHD9Q3L8U1 2897 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 IGKV6-21A0A0C4DH24 114 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 K7ELQ4 463 aaPredicted RBP10.92□□□□□ -0.66
YBX3-212ENST00000542002 ENPP3O14638 875 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 BAIAP3O94812 1187 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 CD52P31358 61 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 TRAPPC10P48553 1259 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 PTGDRQ13258 359 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 GNL2Q13823 731 aaKnown RBP10.92□□□□□ -0.66
YBX3-212ENST00000542002 ECM1Q16610 540 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 KIZQ2M2Z5 673 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 TMEM266Q2M3C6 531 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 MTERF2Q49AM1 385 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 IER5Q5VY09 327 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 SPRED2Q7Z698 418 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 RSPH3Q86UC2 560 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 HERC6Q8IVU3 1022 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 C4orf19Q8IY42 314 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 PHOSPHO2Q8TCD6 241 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 SEPT8Q92599 483 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 TIFAQ96CG3 184 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 ZNF668Q96K58 619 aaPredicted RBP10.92□□□□□ -0.66
YBX3-212ENST00000542002 GUCD1Q96NT3 240 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 LXNQ9BS40 222 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 IFIH1Q9BYX4 1025 aaKnown RBP10.92□□□□□ -0.66
YBX3-212ENST00000542002 NKX2-4Q9H2Z4 354 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 TMX1Q9H3N1 280 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 SUGCTQ9HAC7 445 aa10.92□□□□□ -0.66
YBX3-212ENST00000542002 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.92□□□□□ -0.66
YBX3-212ENST00000542002 SEPT9Q9UHD8 586 aaPredicted RBP10.92□□□□□ -0.66
YBX3-212ENST00000542002 NOC2LQ9Y3T9 749 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms