RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 MAGEB2O15479 319 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 DHX15O43143 795 aaKnown RBP16.95■□□□□ 0.3
ITM2C-208ENST00000541852 PRPF3O43395 683 aaKnown RBP16.95■□□□□ 0.3
ITM2C-208ENST00000541852 PSAPP07602 524 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 LTBRP36941 435 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 CRYBB1P53674 252 aaPredicted RBP16.95■□□□□ 0.3
ITM2C-208ENST00000541852 UBE3AQ05086 875 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 TMEM62Q0P6H9 643 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 HYAL1Q12794 435 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 SMAD2Q15796 467 aaKnown RBP16.95■□□□□ 0.3
ITM2C-208ENST00000541852 CSPP1Q1MSJ5 1256 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 JAKMIP3Q5VZ66 844 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 SLC24A5Q71RS6 500 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 CKAP2LQ8IYA6 745 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 REXO1Q8N1G1 1221 aaKnown RBP16.95■□□□□ 0.3
ITM2C-208ENST00000541852 SPPL3Q8TCT6 385 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 TRAPPC12Q8WVT3 735 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 CRYGNQ8WXF5 182 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 KHSRPQ92945 711 aaKnown RBP eCLIP16.95■□□□□ 0.3
ITM2C-208ENST00000541852 KCNB2Q92953 911 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 TCEANC2Q96MN5 208 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 RGS18Q9NS28 235 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 TMEM260Q9NX78 707 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 PCDHA10Q9Y5I2 948 aa16.95■□□□□ 0.3
ITM2C-208ENST00000541852 MAFBQ9Y5Q3 323 aaPredicted RBP16.95■□□□□ 0.3
ITM2C-208ENST00000541852 MRPL42Q9Y6G3 142 aaKnown RBP16.95■□□□□ 0.3
ITM2C-208ENST00000541852 IGLV3-22A0A075B6J6 115 aa16.94■□□□□ 0.3
ITM2C-208ENST00000541852 DENND3A2RUS2 1198 aa16.94■□□□□ 0.3
ITM2C-208ENST00000541852 FAM86B1E9PN63 330 aa16.94■□□□□ 0.3
ITM2C-208ENST00000541852 DCXO43602 365 aa16.94■□□□□ 0.3
ITM2C-208ENST00000541852 CCNE2O96020 404 aa16.94■□□□□ 0.3
ITM2C-208ENST00000541852 FAM86B2P0C5J1 330 aa16.94■□□□□ 0.3
ITM2C-208ENST00000541852 PSMA5P28066 241 aa16.94■□□□□ 0.3
ITM2C-208ENST00000541852 TMOD1P28289 359 aa16.94■□□□□ 0.3
ITM2C-208ENST00000541852 ZP2Q05996 745 aa16.94■□□□□ 0.3
ITM2C-208ENST00000541852 ADAM15Q13444 863 aa16.94■□□□□ 0.3
ITM2C-208ENST00000541852 PDE12Q6L8Q7 609 aaKnown RBP16.94■□□□□ 0.3
ITM2C-208ENST00000541852 BLOC1S2Q6QNY1 142 aa16.94■□□□□ 0.3
ITM2C-208ENST00000541852 LINC01599Q8WXQ3 324 aa16.94■□□□□ 0.3
ITM2C-208ENST00000541852 FAM167AQ96KS9 214 aa16.94■□□□□ 0.3
ITM2C-208ENST00000541852 ERVK-5Q9HDB9 667 aa16.94■□□□□ 0.3
ITM2C-208ENST00000541852 ALG13Q9NP73 1137 aaKnown RBP16.94■□□□□ 0.3
ITM2C-208ENST00000541852 DDX39AO00148 427 aaKnown RBP16.93■□□□□ 0.3
ITM2C-208ENST00000541852 CIITAP33076 1130 aa16.93■□□□□ 0.3
ITM2C-208ENST00000541852 USP11P51784 963 aa16.93■□□□□ 0.3
ITM2C-208ENST00000541852 SMAD4Q13485 552 aaKnown RBP16.93■□□□□ 0.3
ITM2C-208ENST00000541852 Q6ZUG5 572 aa16.93■□□□□ 0.3
ITM2C-208ENST00000541852 CCDC60Q8IWA6 550 aaPredicted RBP16.93■□□□□ 0.3
ITM2C-208ENST00000541852 KLHL23Q8NBE8 558 aa16.93■□□□□ 0.3
ITM2C-208ENST00000541852 CCDC148Q8NFR7 591 aa16.93■□□□□ 0.3
ITM2C-208ENST00000541852 ZBTB10Q96DT7 871 aa16.93■□□□□ 0.3
ITM2C-208ENST00000541852 ADAM2Q99965 735 aa16.93■□□□□ 0.3
ITM2C-208ENST00000541852 TMX1Q9H3N1 280 aa16.93■□□□□ 0.3
ITM2C-208ENST00000541852 IGFLR1Q9H665 355 aa16.93■□□□□ 0.3
ITM2C-208ENST00000541852 ELAC1Q9H777 363 aaKnown RBP16.93■□□□□ 0.3
ITM2C-208ENST00000541852 C11orf16Q9NQ32 467 aa16.93■□□□□ 0.3
ITM2C-208ENST00000541852 NRBP2Q9NSY0 501 aa16.93■□□□□ 0.3
ITM2C-208ENST00000541852 CD207Q9UJ71 328 aa16.93■□□□□ 0.3
ITM2C-208ENST00000541852 ST3GAL5Q9UNP4 418 aa16.93■□□□□ 0.3
ITM2C-208ENST00000541852 GINS2Q9Y248 185 aa16.93■□□□□ 0.3
ITM2C-208ENST00000541852 MYH9P35579 1960 aaKnown RBP16.93■□□□□ 0.3
ITM2C-208ENST00000541852 LOXHD1Q8IVV2 1947 aa16.92■□□□□ 0.3
ITM2C-208ENST00000541852 MBTPS2O43462 519 aa16.92■□□□□ 0.3
ITM2C-208ENST00000541852 ITGB1P05556 798 aa16.92■□□□□ 0.3
ITM2C-208ENST00000541852 FAM189BP81408 668 aa16.92■□□□□ 0.3
ITM2C-208ENST00000541852 CDC42EP1Q00587 391 aa16.92■□□□□ 0.3
ITM2C-208ENST00000541852 SPOUT1Q5T280 376 aaKnown RBP16.92■□□□□ 0.3
ITM2C-208ENST00000541852 EFHBQ8N7U6 833 aa16.92■□□□□ 0.3
ITM2C-208ENST00000541852 POF1BQ8WVV4 589 aa16.92■□□□□ 0.3
ITM2C-208ENST00000541852 RNF26Q9BY78 433 aaPredicted RBP16.92■□□□□ 0.3
ITM2C-208ENST00000541852 C22orf23Q9BZE7 217 aa16.92■□□□□ 0.3
ITM2C-208ENST00000541852 KCNH6Q9H252 994 aa16.92■□□□□ 0.3
ITM2C-208ENST00000541852 ATP6V0A4Q9HBG4 840 aa16.92■□□□□ 0.3
ITM2C-208ENST00000541852 NOC2LQ9Y3T9 749 aaKnown RBP16.92■□□□□ 0.3
ITM2C-208ENST00000541852 EVPLQ92817 2033 aa16.92■□□□□ 0.3
ITM2C-208ENST00000541852 HOXA2O43364 376 aa16.91■□□□□ 0.3
ITM2C-208ENST00000541852 REC8O95072 547 aa16.91■□□□□ 0.3
ITM2C-208ENST00000541852 EYA4O95677 639 aa16.91■□□□□ 0.3
ITM2C-208ENST00000541852 HSPA4P34932 840 aa16.91■□□□□ 0.3
ITM2C-208ENST00000541852 NDUFV1P49821 464 aa16.91■□□□□ 0.3
ITM2C-208ENST00000541852 APOBRQ0VD83 1088 aa16.91■□□□□ 0.3
ITM2C-208ENST00000541852 CAMK1Q14012 370 aa16.91■□□□□ 0.3
ITM2C-208ENST00000541852 TMEM266Q2M3C6 531 aa16.91■□□□□ 0.3
ITM2C-208ENST00000541852 PAN2Q504Q3 1202 aaKnown RBP16.91■□□□□ 0.3
ITM2C-208ENST00000541852 METTL13Q8N6R0 699 aa16.91■□□□□ 0.3
ITM2C-208ENST00000541852 BRF1Q92994 677 aa16.91■□□□□ 0.3
ITM2C-208ENST00000541852 JAKMIP1Q96N16 626 aaKnown RBP16.91■□□□□ 0.3
ITM2C-208ENST00000541852 AGXT2Q9BYV1 514 aa16.91■□□□□ 0.3
ITM2C-208ENST00000541852 SH3GLB2Q9NR46 395 aa16.91■□□□□ 0.3
ITM2C-208ENST00000541852 TMEM161AQ9NX61 479 aa16.91■□□□□ 0.3
ITM2C-208ENST00000541852 PUF60Q9UHX1 559 aaKnown RBP16.91■□□□□ 0.3
ITM2C-208ENST00000541852 SAMM50Q9Y512 469 aa16.91■□□□□ 0.3
ITM2C-208ENST00000541852 NID2Q14112 1375 aa16.9■□□□□ 0.3
ITM2C-208ENST00000541852 FAM86C2PA6NEL3 165 aa16.9■□□□□ 0.3
ITM2C-208ENST00000541852 WDR64B1ANS9 1081 aa16.9■□□□□ 0.3
ITM2C-208ENST00000541852 ZBTB42B2RXF5 422 aa16.9■□□□□ 0.3
ITM2C-208ENST00000541852 C9IYK1 514 aa16.9■□□□□ 0.3
ITM2C-208ENST00000541852 RBAK-RBAKDNI3L0D1 243 aa16.9■□□□□ 0.3
ITM2C-208ENST00000541852 EPB41L2O43491 1005 aaKnown RBP16.9■□□□□ 0.3
ITM2C-208ENST00000541852 C22orf31O95567 290 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms