RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 ADCY2Q08462 1091 aa11.5□□□□□ -0.57
GABRB3-204ENST00000541819 RBBP7Q16576 425 aa11.5□□□□□ -0.57
GABRB3-204ENST00000541819 DALRD3Q5D0E6 543 aaKnown RBP11.5□□□□□ -0.57
GABRB3-204ENST00000541819 RPAINQ86UA6 219 aa11.5□□□□□ -0.57
GABRB3-204ENST00000541819 CASS4Q9NQ75 786 aa11.5□□□□□ -0.57
GABRB3-204ENST00000541819 ASNSD1Q9NWL6 643 aa11.5□□□□□ -0.57
GABRB3-204ENST00000541819 SELENONQ9NZV5 590 aa11.5□□□□□ -0.57
GABRB3-204ENST00000541819 TRIM33Q9UPN9 1127 aa11.5□□□□□ -0.57
GABRB3-204ENST00000541819 PEG3Q9GZU2 1588 aa11.5□□□□□ -0.57
GABRB3-204ENST00000541819 LMNAP02545 664 aaKnown RBP11.5□□□□□ -0.57
GABRB3-204ENST00000541819 KRT8P05787 483 aa11.5□□□□□ -0.57
GABRB3-204ENST00000541819 VCPP55072 806 aaKnown RBP11.5□□□□□ -0.57
GABRB3-204ENST00000541819 MED21Q13503 144 aa11.5□□□□□ -0.57
GABRB3-204ENST00000541819 LRRC24Q50LG9 513 aa11.5□□□□□ -0.57
GABRB3-204ENST00000541819 WDR75Q8IWA0 830 aaKnown RBP11.5□□□□□ -0.57
GABRB3-204ENST00000541819 TBC1D19Q8N5T2 526 aa11.5□□□□□ -0.57
GABRB3-204ENST00000541819 EGFL8Q99944 293 aa11.5□□□□□ -0.57
GABRB3-204ENST00000541819 KAT6BQ8WYB5 2073 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 A0A1W2PQ27 194 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 A0A1W2PQ64 194 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 A0A1W2PQD8 194 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 HUS1O60921 280 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 PLA2G4BP0C869 781 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 CRKLP46109 303 aaKnown RBP11.49□□□□□ -0.57
GABRB3-204ENST00000541819 ARL4CP56559 192 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 COPS2P61201 443 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 C6orf118Q5T5N4 469 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 NUDCD3Q8IVD9 361 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 SYT2Q8N9I0 419 aaPredicted RBP11.49□□□□□ -0.57
GABRB3-204ENST00000541819 RASGRP4Q8TDF6 673 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 MYCBPQ99417 103 aaPredicted RBP11.49□□□□□ -0.57
GABRB3-204ENST00000541819 ACTR5Q9H9F9 607 aaPredicted RBP11.49□□□□□ -0.57
GABRB3-204ENST00000541819 SARS2Q9NP81 518 aaKnown RBP11.49□□□□□ -0.57
GABRB3-204ENST00000541819 NGRNQ9NPE2 291 aaKnown RBP11.49□□□□□ -0.57
GABRB3-204ENST00000541819 WARS2Q9UGM6 360 aaKnown RBP11.49□□□□□ -0.57
GABRB3-204ENST00000541819 DIS3Q9Y2L1 958 aaKnown RBP11.49□□□□□ -0.57
GABRB3-204ENST00000541819 YEATS2Q9ULM3 1422 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 PI4K2BG5E9Z4 385 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 DCTN3O75935 186 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 CIAO1O76071 339 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 GRIN1Q05586 938 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 ACCSLQ4AC99 568 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 ZNF772Q68DY9 489 aaPredicted RBP11.49□□□□□ -0.57
GABRB3-204ENST00000541819 RRM2BQ7LG56 351 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 BEST2Q8NFU1 509 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 ZFYVE19Q96K21 471 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 TRIM54Q9BYV2 358 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 SYTL2Q9HCH5 934 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 RWDD2AQ9UIY3 292 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 APOBEC2Q9Y235 224 aaKnown RBP11.49□□□□□ -0.57
GABRB3-204ENST00000541819 KIAA0232Q92628 1395 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 AARSP49588 968 aaKnown RBP eCLIP11.49□□□□□ -0.57
GABRB3-204ENST00000541819 TMPRSS15P98073 1019 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 TRIM60Q495X7 471 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 PPP4R3CPQ6ZMV5 832 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 ARHGEF25Q86VW2 580 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 GREM2Q9H772 168 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 GPBP1L1Q9HC44 474 aaPredicted RBP11.49□□□□□ -0.57
GABRB3-204ENST00000541819 RAPGEF6Q8TEU7 1601 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 BBOX1O75936 387 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 PHKA2P46019 1235 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 PPP6R3Q5H9R7 873 aaPredicted RBP11.49□□□□□ -0.57
GABRB3-204ENST00000541819 GRAMD4Q6IC98 578 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 TOGARAM2Q6ZUX3 1019 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 EFHBQ8N7U6 833 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 THOC2Q8NI27 1593 aaKnown RBP11.49□□□□□ -0.57
GABRB3-204ENST00000541819 RBM41Q96IZ5 413 aaKnown RBP11.49□□□□□ -0.57
GABRB3-204ENST00000541819 SP110Q9HB58 689 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 ATP6V0A4Q9HBG4 840 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 PI4KBQ9UBF8 816 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 SERPINB13Q9UIV8 391 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 CLCA2Q9UQC9 943 aa11.49□□□□□ -0.57
GABRB3-204ENST00000541819 PHKA1P46020 1223 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 SH3TC2Q8TF17 1288 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 GCOM2Q9BZD3 368 aaPredicted RBP11.48□□□□□ -0.57
GABRB3-204ENST00000541819 KDM4CQ9H3R0 1056 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 GOLGA8IPA6NC78 632 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 GOLGA8JA6NMD2 632 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 ZSCAN9O15535 394 aaPredicted RBP11.48□□□□□ -0.57
GABRB3-204ENST00000541819 KRT4P19013 534 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 HOXD10P28358 340 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 RAD51Q06609 339 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 CIAPIN1Q6FI81 312 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 RASSF3Q86WH2 238 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 SYNDIG1Q9H7V2 258 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 QTRT2Q9H974 415 aaKnown RBP11.48□□□□□ -0.57
GABRB3-204ENST00000541819 ZSCAN32Q9NX65 697 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 ABCC10Q5T3U5 1492 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 KRT38O76015 456 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 PDE8BO95263 885 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 SCRN1Q12765 414 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 E2F5Q15329 346 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 C16orf87Q6PH81 154 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 RHOT2Q8IXI1 618 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 TTC13Q8NBP0 860 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 EXOC4Q96A65 974 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 FMO2Q99518 471 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 NHEJ1Q9H9Q4 299 aaPredicted RBP11.48□□□□□ -0.57
GABRB3-204ENST00000541819 SEL1LQ9UBV2 794 aa11.48□□□□□ -0.57
GABRB3-204ENST00000541819 PCDHA13Q9Y5I0 950 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms