RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 ADAM33Q9BZ11 813 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 TSGA10Q9BZW7 698 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 KCTD10Q9H3F6 313 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 ROBO3Q96MS0 1386 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 AFPP02771 609 aaKnown RBP16.42■□□□□ 0.22
VARS2-211ENST00000541562 VPS41P49754 854 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 CCDC25Q86WR0 208 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 FAM178BQ8IXR5 827 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 GLG1Q92896 1179 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 CEP72Q9P209 647 aa16.42■□□□□ 0.22
VARS2-211ENST00000541562 ARAP2Q8WZ64 1704 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 DAPK3O43293 454 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 ATP8B1O43520 1251 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 TMOD1P28289 359 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 NNTQ13423 1086 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 RNF187Q5TA31 235 aaPredicted RBP16.41■□□□□ 0.22
VARS2-211ENST00000541562 FAM186BQ8IYM0 893 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 SAAL1Q96ER3 474 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 FAM184BQ9ULE4 1060 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 CCDC88AQ3V6T2 1871 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 KRIT1O00522 736 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 BUB1BO60566 1050 aaPredicted RBP16.41■□□□□ 0.22
VARS2-211ENST00000541562 SLCO1A2P46721 670 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 NPEPPSP55786 919 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 GRIPAP1Q4V328 841 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 TTMPQ5BVD1 217 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 PPP4R3AQ6IN85 833 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 IQCEQ6IPM2 695 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 SLC20A1Q8WUM9 679 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 FEZ2Q9UHY8 353 aaPredicted RBP16.41■□□□□ 0.22
VARS2-211ENST00000541562 OPLAHO14841 1288 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 TTI1O43156 1089 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 EPB41P11171 864 aaKnown RBP16.41■□□□□ 0.22
VARS2-211ENST00000541562 PLA2G4FQ68DD2 849 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 ERMNQ8TAM6 284 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 GOLGA5Q8TBA6 731 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 WDR11Q9BZH6 1224 aa16.41■□□□□ 0.22
VARS2-211ENST00000541562 FOXO6A8MYZ6 492 aa16.4■□□□□ 0.22
VARS2-211ENST00000541562 H0YIN7 160 aa16.4■□□□□ 0.22
VARS2-211ENST00000541562 HARSP12081 509 aaKnown RBP16.4■□□□□ 0.22
VARS2-211ENST00000541562 SLC18A3Q16572 532 aa16.4■□□□□ 0.22
VARS2-211ENST00000541562 LLGL2Q6P1M3 1020 aa16.4■□□□□ 0.22
VARS2-211ENST00000541562 WDR93Q6P2C0 686 aa16.4■□□□□ 0.22
VARS2-211ENST00000541562 IL31RAQ8NI17 732 aa16.4■□□□□ 0.22
VARS2-211ENST00000541562 SPIRE2Q8WWL2 714 aa16.4■□□□□ 0.22
VARS2-211ENST00000541562 ZNF577Q9BSK1 485 aa16.4■□□□□ 0.22
VARS2-211ENST00000541562 TCEAL9Q9UHQ7 104 aa16.4■□□□□ 0.22
VARS2-211ENST00000541562 SCN7AQ01118 1682 aa16.4■□□□□ 0.22
VARS2-211ENST00000541562 SNHG28P0DPA3 235 aa16.4■□□□□ 0.22
VARS2-211ENST00000541562 TCP1P17987 556 aaKnown RBP16.4■□□□□ 0.22
VARS2-211ENST00000541562 ZCWPW2Q504Y3 356 aa16.4■□□□□ 0.22
VARS2-211ENST00000541562 RINT1Q6NUQ1 792 aa16.4■□□□□ 0.22
VARS2-211ENST00000541562 TELO2Q9Y4R8 837 aa16.4■□□□□ 0.22
VARS2-211ENST00000541562 IGSF9BQ9UPX0 1349 aa16.4■□□□□ 0.22
VARS2-211ENST00000541562 CCDC169A6NNP5 214 aa16.39■□□□□ 0.22
VARS2-211ENST00000541562 EVI5O60447 810 aa16.39■□□□□ 0.22
VARS2-211ENST00000541562 NF2P35240 595 aa16.39■□□□□ 0.22
VARS2-211ENST00000541562 CLK2P49760 499 aaKnown RBP16.39■□□□□ 0.22
VARS2-211ENST00000541562 DRAP1Q14919 205 aaPredicted RBP16.39■□□□□ 0.22
VARS2-211ENST00000541562 TAB3Q8N5C8 712 aaPredicted RBP16.39■□□□□ 0.22
VARS2-211ENST00000541562 NEUROG2Q9H2A3 272 aa16.39■□□□□ 0.22
VARS2-211ENST00000541562 MAGEF1Q9HAY2 307 aa16.39■□□□□ 0.22
VARS2-211ENST00000541562 DNAJC12Q9UKB3 198 aa16.39■□□□□ 0.22
VARS2-211ENST00000541562 BRCA2P51587 3418 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 UBAP2Q5T6F2 1119 aaKnown RBP16.39■□□□□ 0.21
VARS2-211ENST00000541562 METTL13Q8N6R0 699 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 FAM163AQ96GL9 167 aaPredicted RBP16.39■□□□□ 0.21
VARS2-211ENST00000541562 CAPS2Q9BXY5 557 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 RAVER2Q9HCJ3 691 aaKnown RBP16.39■□□□□ 0.21
VARS2-211ENST00000541562 CWC15Q9P013 229 aaKnown RBP16.39■□□□□ 0.21
VARS2-211ENST00000541562 MYH7BA7E2Y1 1941 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 MYH1P12882 1939 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 DDX60LQ5H9U9 1706 aaKnown RBP16.39■□□□□ 0.21
VARS2-211ENST00000541562 IGKV6D-41A0A0C4DH26 115 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 ESYT2A0FGR8 921 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 K7ENM7 598 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 NFIBO00712 420 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 FGGP02679 453 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 NPR1P16066 1061 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 STAT2P52630 851 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 GALCP54803 685 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 MTM1Q13496 603 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 TRIP13Q15645 432 aaPredicted RBP16.39■□□□□ 0.21
VARS2-211ENST00000541562 ARHGEF26Q96DR7 871 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 CRAMP1Q96RY5 1269 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 UBE2TQ9NPD8 197 aaPredicted RBP16.39■□□□□ 0.21
VARS2-211ENST00000541562 PCDHA2Q9Y5H9 948 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 LAMB2P55268 1798 aa16.39■□□□□ 0.21
VARS2-211ENST00000541562 TESPA1A2RU30 521 aaPredicted RBP16.38■□□□□ 0.21
VARS2-211ENST00000541562 MESDQ14696 234 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 DLK2Q6UY11 383 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 LARGE2Q8N3Y3 721 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 SLC30A5Q8TAD4 765 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 ETNPPLQ8TBG4 499 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 LENG9Q96B70 501 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 NAGPAQ9UK23 515 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 PLAAQ9Y263 795 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 ATF5Q9Y2D1 282 aaPredicted RBP16.38■□□□□ 0.21
VARS2-211ENST00000541562 ATP8A1Q9Y2Q0 1164 aa16.38■□□□□ 0.21
VARS2-211ENST00000541562 DLATP10515 647 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms