RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 DNAJC21Q5F1R6 531 aaKnown RBP10.45□□□□□ -0.74
CNOT4-212ENST00000541284 GJB7Q6PEY0 223 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 RASGEF1CQ8N431 466 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 ACTRT1Q8TDG2 376 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 PAGR1Q9BTK6 254 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 RUSC1Q9BVN2 902 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 LRRC4CQ9HCJ2 640 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 UTRNP46939 3433 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 CNTNAP1P78357 1384 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 FAM196BA6NMK8 535 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 OPA1O60313 960 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 ZEB2O60315 1214 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 EEF2P13639 858 aaKnown RBP10.45□□□□□ -0.74
CNOT4-212ENST00000541284 SCNN1DP51172 638 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 EIF1ADQ8N9N8 165 aaKnown RBP10.45□□□□□ -0.74
CNOT4-212ENST00000541284 TPCN2Q8NHX9 752 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 LNX1Q8TBB1 728 aaPredicted RBP10.45□□□□□ -0.74
CNOT4-212ENST00000541284 SEC14L1Q92503 715 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 EML1O00423 815 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 CIITAP33076 1130 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 PAK2Q13177 524 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 ITGB3BPQ13352 177 aaPredicted RBP10.45□□□□□ -0.74
CNOT4-212ENST00000541284 GOLGA6L1Q8N7Z2 621 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 MASTLQ96GX5 879 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 ISCUQ9H1K1 167 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 RABEP2Q9H5N1 569 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 FAM198AQ9UFP1 575 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 PCDHA1Q9Y5I3 950 aa10.45□□□□□ -0.74
CNOT4-212ENST00000541284 IGLV3-22A0A075B6J6 115 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 DDTLA6NHG4 134 aaPredicted RBP10.44□□□□□ -0.74
CNOT4-212ENST00000541284 PDXKO00764 312 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 RIMBP2O15034 1052 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 SREBF1P36956 1147 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 DNA2P51530 1060 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 GUCY2FP51841 1108 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 SNAP25P60880 206 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 KCTD16Q68DU8 428 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 EFCAB13Q8IY85 973 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 METTL13Q8N6R0 699 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 CYP2W1Q8TAV3 490 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 NAP1L4Q99733 375 aaKnown RBP10.44□□□□□ -0.74
CNOT4-212ENST00000541284 ZSWIM8A7E2V4 1837 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 IGSF9BQ9UPX0 1349 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 C6orf229H3BNL8 230 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 TBX3O15119 743 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 MSH4O15457 936 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 HSF2BPO75031 334 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 AFPP02771 609 aaKnown RBP10.44□□□□□ -0.74
CNOT4-212ENST00000541284 FLT3P36888 993 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 RNASE9P60153 205 aaKnown RBP10.44□□□□□ -0.74
CNOT4-212ENST00000541284 PABPC4Q13310 644 aaKnown RBP eCLIP10.44□□□□□ -0.74
CNOT4-212ENST00000541284 PROCA1Q8NCQ7 364 aaPredicted RBP10.44□□□□□ -0.74
CNOT4-212ENST00000541284 BCAS4Q8TDM0 211 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 DCAF4Q8WV16 495 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 KCNQ5Q9NR82 932 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 NYAP2Q9P242 653 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 SYNPO2Q9UMS6 1093 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 FAM169AQ9Y6X4 670 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 ATXN2Q99700 1313 aaKnown RBP10.44□□□□□ -0.74
CNOT4-212ENST00000541284 YDJCA8MPS7 323 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 CETN3O15182 167 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 ITGA4P13612 1032 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 AP3B2Q13367 1082 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 C10orf76Q5T2E6 689 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 DCAF12L1Q5VU92 463 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 TADA2BQ86TJ2 420 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 SLFN12Q8IYM2 578 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 WHAMMQ8TF30 809 aa10.44□□□□□ -0.74
CNOT4-212ENST00000541284 TAF1DQ9H5J8 278 aaPredicted RBP10.44□□□□□ -0.74
CNOT4-212ENST00000541284 FRMPD4Q14CM0 1322 aa10.43□□□□□ -0.74
CNOT4-212ENST00000541284 RRP1BQ14684 758 aaKnown RBP10.43□□□□□ -0.74
CNOT4-212ENST00000541284 ENOX2Q16206 610 aaKnown RBP10.43□□□□□ -0.74
CNOT4-212ENST00000541284 NT5DC3Q86UY8 548 aa10.43□□□□□ -0.74
CNOT4-212ENST00000541284 DDX42Q86XP3 938 aaKnown RBP eCLIP10.43□□□□□ -0.74
CNOT4-212ENST00000541284 IFT81Q8WYA0 676 aa10.43□□□□□ -0.74
CNOT4-212ENST00000541284 HES6Q96HZ4 224 aa10.43□□□□□ -0.74
CNOT4-212ENST00000541284 SGIP1Q9BQI5 828 aa10.43□□□□□ -0.74
CNOT4-212ENST00000541284 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.43□□□□□ -0.74
CNOT4-212ENST00000541284 TMBIM4Q9HC24 238 aa10.43□□□□□ -0.74
CNOT4-212ENST00000541284 BMP2KQ9NSY1 1161 aaPredicted RBP10.43□□□□□ -0.74
CNOT4-212ENST00000541284 A0A0A6YYK5 440 aaPredicted RBP10.43□□□□□ -0.74
CNOT4-212ENST00000541284 SLC16A3O15427 465 aaKnown RBP10.43□□□□□ -0.74
CNOT4-212ENST00000541284 NR3C1P04150 777 aa10.43□□□□□ -0.74
CNOT4-212ENST00000541284 LSP1P33241 339 aa10.43□□□□□ -0.74
CNOT4-212ENST00000541284 HSD17B3P37058 310 aa10.43□□□□□ -0.74
CNOT4-212ENST00000541284 FNTAP49354 379 aa10.43□□□□□ -0.74
CNOT4-212ENST00000541284 PRR16Q569H4 304 aa10.43□□□□□ -0.74
CNOT4-212ENST00000541284 POTEAQ6S8J7 498 aa10.43□□□□□ -0.74
CNOT4-212ENST00000541284 SLC30A10Q6XR72 485 aa10.43□□□□□ -0.74
CNOT4-212ENST00000541284 TXLNGYQ9BZA5 131 aa10.43□□□□□ -0.74
CNOT4-212ENST00000541284 TYW1Q9NV66 732 aaKnown RBP10.43□□□□□ -0.74
CNOT4-212ENST00000541284 ARMCX3Q9UH62 379 aaPredicted RBP10.43□□□□□ -0.74
CNOT4-212ENST00000541284 NR2E1Q9Y466 385 aa10.43□□□□□ -0.74
CNOT4-212ENST00000541284 NCANO14594 1321 aa10.43□□□□□ -0.74
CNOT4-212ENST00000541284 KCNK3O14649 394 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 ATP1A2P50993 1020 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 CACNB3P54284 484 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 GUCY1A3Q02108 690 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 EXOC3L4Q17RC7 722 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 ALKBH5Q6P6C2 394 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms