RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 STBD1O95210 358 aa20.98■□□□□ 0.95
VPS33A-205ENST00000541169 SPATA31C1P0DKV0 1188 aa20.98■□□□□ 0.95
VPS33A-205ENST00000541169 DDIT3P35638 169 aa20.98■□□□□ 0.95
VPS33A-205ENST00000541169 CCT6AP40227 531 aaKnown RBP20.98■□□□□ 0.95
VPS33A-205ENST00000541169 PPIGQ13427 754 aaKnown RBP eCLIP20.98■□□□□ 0.95
VPS33A-205ENST00000541169 PKP1Q13835 747 aa20.98■□□□□ 0.95
VPS33A-205ENST00000541169 CTTNQ14247 550 aaKnown RBP20.98■□□□□ 0.95
VPS33A-205ENST00000541169 STK38Q15208 465 aa20.98■□□□□ 0.95
VPS33A-205ENST00000541169 ANO5Q75V66 913 aa20.98■□□□□ 0.95
VPS33A-205ENST00000541169 RPUSD2Q8IZ73 545 aaKnown RBP20.98■□□□□ 0.95
VPS33A-205ENST00000541169 KRI1Q8N9T8 703 aaKnown RBP20.98■□□□□ 0.95
VPS33A-205ENST00000541169 SNX29Q8TEQ0 813 aa20.98■□□□□ 0.95
VPS33A-205ENST00000541169 SLC7A3Q8WY07 619 aa20.98■□□□□ 0.95
VPS33A-205ENST00000541169 CYP26B1Q9NR63 512 aa20.98■□□□□ 0.95
VPS33A-205ENST00000541169 DBR1Q9UK59 544 aaKnown RBP20.98■□□□□ 0.95
VPS33A-205ENST00000541169 ZMYND8Q9ULU4 1186 aaPredicted RBP20.98■□□□□ 0.95
VPS33A-205ENST00000541169 SPTLC2O15270 562 aa20.97■□□□□ 0.95
VPS33A-205ENST00000541169 C22orf31O95567 290 aa20.97■□□□□ 0.95
VPS33A-205ENST00000541169 CKBP12277 381 aa20.97■□□□□ 0.95
VPS33A-205ENST00000541169 SYN1P17600 705 aa20.97■□□□□ 0.95
VPS33A-205ENST00000541169 TXLNAP40222 546 aa20.97■□□□□ 0.95
VPS33A-205ENST00000541169 THPOP40225 353 aa20.97■□□□□ 0.95
VPS33A-205ENST00000541169 UBA7P41226 1012 aa20.97■□□□□ 0.95
VPS33A-205ENST00000541169 KRT85P78386 507 aa20.97■□□□□ 0.95
VPS33A-205ENST00000541169 ZNF200P98182 395 aaPredicted RBP20.97■□□□□ 0.95
VPS33A-205ENST00000541169 FPGSQ05932 587 aa20.97■□□□□ 0.95
VPS33A-205ENST00000541169 HIC1Q14526 733 aa20.97■□□□□ 0.95
VPS33A-205ENST00000541169 IL17AQ16552 155 aa20.97■□□□□ 0.95
VPS33A-205ENST00000541169 FAM173BQ6P4H8 233 aa20.97■□□□□ 0.95
VPS33A-205ENST00000541169 LINC00301Q8NCQ3 95 aa20.97■□□□□ 0.95
VPS33A-205ENST00000541169 CEP170P1Q96L14 293 aa20.97■□□□□ 0.95
VPS33A-205ENST00000541169 LOXHD1Q8IVV2 1947 aa20.97■□□□□ 0.95
VPS33A-205ENST00000541169 TRIP12Q14669 1992 aaPredicted RBP20.97■□□□□ 0.95
VPS33A-205ENST00000541169 LTBP2Q14767 1821 aa20.97■□□□□ 0.95
VPS33A-205ENST00000541169 BMP8BP34820 402 aa20.96■□□□□ 0.95
VPS33A-205ENST00000541169 TRIM71Q2Q1W2 868 aaKnown RBP20.96■□□□□ 0.95
VPS33A-205ENST00000541169 FAM26DQ5JW98 314 aa20.96■□□□□ 0.95
VPS33A-205ENST00000541169 HYIQ5T013 277 aa20.96■□□□□ 0.95
VPS33A-205ENST00000541169 LRRC8DQ7L1W4 858 aa20.96■□□□□ 0.95
VPS33A-205ENST00000541169 ZNF579Q8NAF0 562 aaKnown RBP20.96■□□□□ 0.95
VPS33A-205ENST00000541169 DHX38Q92620 1227 aaKnown RBP20.96■□□□□ 0.95
VPS33A-205ENST00000541169 CALML4Q96GE6 196 aa20.96■□□□□ 0.95
VPS33A-205ENST00000541169 CDK5RAP3Q96JB5 506 aa20.96■□□□□ 0.95
VPS33A-205ENST00000541169 MAP7D2Q96T17 732 aa20.96■□□□□ 0.95
VPS33A-205ENST00000541169 PPP1R12CQ9BZL4 782 aa20.96■□□□□ 0.95
VPS33A-205ENST00000541169 SCAND2PQ9GZW5 306 aaPredicted RBP20.96■□□□□ 0.95
VPS33A-205ENST00000541169 SQORQ9Y6N5 450 aa20.96■□□□□ 0.95
VPS33A-205ENST00000541169 RSPH10B2B2RC85 870 aa20.95■□□□□ 0.94
VPS33A-205ENST00000541169 MAFO75444 373 aaPredicted RBP20.95■□□□□ 0.94
VPS33A-205ENST00000541169 MED24O75448 989 aa20.95■□□□□ 0.94
VPS33A-205ENST00000541169 DGAT1O75907 488 aa20.95■□□□□ 0.94
VPS33A-205ENST00000541169 IQCF3P0C7M6 154 aa20.95■□□□□ 0.94
VPS33A-205ENST00000541169 RSPH10BP0C881 870 aa20.95■□□□□ 0.94
VPS33A-205ENST00000541169 CEBPZQ03701 1054 aaKnown RBP20.95■□□□□ 0.94
VPS33A-205ENST00000541169 MTERF2Q49AM1 385 aa20.95■□□□□ 0.94
VPS33A-205ENST00000541169 XKR9Q5GH70 373 aa20.95■□□□□ 0.94
VPS33A-205ENST00000541169 FOXD4L5Q5VV16 416 aaPredicted RBP20.95■□□□□ 0.94
VPS33A-205ENST00000541169 EFCAB12Q6NXP0 572 aa20.95■□□□□ 0.94
VPS33A-205ENST00000541169 TRMT1LQ7Z2T5 733 aaKnown RBP20.95■□□□□ 0.94
VPS33A-205ENST00000541169 USP38Q8NB14 1042 aa20.95■□□□□ 0.94
VPS33A-205ENST00000541169 PPP1R13LQ8WUF5 828 aa20.95■□□□□ 0.94
VPS33A-205ENST00000541169 TCP11Q8WWU5 503 aa20.95■□□□□ 0.94
VPS33A-205ENST00000541169 FOXD4L4Q8WXT5 416 aaPredicted RBP20.95■□□□□ 0.94
VPS33A-205ENST00000541169 BADQ92934 168 aa20.95■□□□□ 0.94
VPS33A-205ENST00000541169 WRAP73Q9P2S5 460 aaPredicted RBP20.95■□□□□ 0.94
VPS33A-205ENST00000541169 FBXO2Q9UK22 296 aaPredicted RBP20.95■□□□□ 0.94
VPS33A-205ENST00000541169 DNM3Q9UQ16 869 aa20.95■□□□□ 0.94
VPS33A-205ENST00000541169 ZDHHC9Q9Y397 364 aa20.95■□□□□ 0.94
VPS33A-205ENST00000541169 TNRC18O15417 2968 aaPredicted RBP20.95■□□□□ 0.94
VPS33A-205ENST00000541169 IGKV6-21A0A0C4DH24 114 aa20.94■□□□□ 0.94
VPS33A-205ENST00000541169 CYP2C18P33260 490 aa20.94■□□□□ 0.94
VPS33A-205ENST00000541169 POLGP54098 1239 aaPredicted RBP20.94■□□□□ 0.94
VPS33A-205ENST00000541169 METTL13Q8N6R0 699 aa20.94■□□□□ 0.94
VPS33A-205ENST00000541169 TRAPPC12Q8WVT3 735 aa20.94■□□□□ 0.94
VPS33A-205ENST00000541169 CEP89Q96ST8 783 aa20.94■□□□□ 0.94
VPS33A-205ENST00000541169 GDF15Q99988 308 aa20.94■□□□□ 0.94
VPS33A-205ENST00000541169 CCSER1Q9C0I3 900 aa20.94■□□□□ 0.94
VPS33A-205ENST00000541169 DHX33Q9H6R0 707 aaKnown RBP20.94■□□□□ 0.94
VPS33A-205ENST00000541169 TFIP11Q9UBB9 837 aaKnown RBP20.94■□□□□ 0.94
VPS33A-205ENST00000541169 CCDC39Q9UFE4 941 aa20.94■□□□□ 0.94
VPS33A-205ENST00000541169 TANC1Q9C0D5 1861 aa20.94■□□□□ 0.94
VPS33A-205ENST00000541169 A0A1W2PPC1 479 aa20.93■□□□□ 0.94
VPS33A-205ENST00000541169 MARCKSP29966 332 aaPredicted RBP20.93■□□□□ 0.94
VPS33A-205ENST00000541169 MAGEA10P43363 369 aaPredicted RBP20.93■□□□□ 0.94
VPS33A-205ENST00000541169 RARRES1P49788 294 aa20.93■□□□□ 0.94
VPS33A-205ENST00000541169 ODR4Q5SWX8 454 aa20.93■□□□□ 0.94
VPS33A-205ENST00000541169 ZNF618Q5T7W0 954 aa20.93■□□□□ 0.94
VPS33A-205ENST00000541169 RUFY4Q6ZNE9 571 aa20.93■□□□□ 0.94
VPS33A-205ENST00000541169 CABP7Q86V35 215 aa20.93■□□□□ 0.94
VPS33A-205ENST00000541169 KIAA0319LQ8IZA0 1049 aa20.93■□□□□ 0.94
VPS33A-205ENST00000541169 MCPH1Q8NEM0 835 aa20.93■□□□□ 0.94
VPS33A-205ENST00000541169 DNAJB3Q8WWF6 145 aa20.93■□□□□ 0.94
VPS33A-205ENST00000541169 FTOQ9C0B1 505 aaKnown RBP eCLIP20.93■□□□□ 0.94
VPS33A-205ENST00000541169 IL23AQ9NPF7 189 aa20.93■□□□□ 0.94
VPS33A-205ENST00000541169 RCOR1Q9UKL0 485 aa20.93■□□□□ 0.94
VPS33A-205ENST00000541169 KIAA1024Q9UPX6 916 aa20.93■□□□□ 0.94
VPS33A-205ENST00000541169 ASAP2O43150 1006 aa20.92■□□□□ 0.94
VPS33A-205ENST00000541169 CUTAO60888 179 aa20.92■□□□□ 0.94
VPS33A-205ENST00000541169 ITGB8P26012 769 aa20.92■□□□□ 0.94
VPS33A-205ENST00000541169 MRPS6P82932 125 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms