RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 KRTAP9-7A8MTY7 169 aa8.72□□□□□ -1.01
YBX3-210ENST00000540975 MYCLP1P12525 358 aaPredicted RBP8.72□□□□□ -1.01
YBX3-210ENST00000540975 PTX3P26022 381 aaPredicted RBP8.72□□□□□ -1.01
YBX3-210ENST00000540975 CD83Q01151 205 aa8.72□□□□□ -1.01
YBX3-210ENST00000540975 SKOR2Q2VWA4 1001 aaPredicted RBP8.72□□□□□ -1.01
YBX3-210ENST00000540975 KANK2Q63ZY3 851 aa8.72□□□□□ -1.01
YBX3-210ENST00000540975 CALML6Q8TD86 181 aa8.72□□□□□ -1.01
YBX3-210ENST00000540975 C16orf92Q96LL3 132 aa8.72□□□□□ -1.01
YBX3-210ENST00000540975 ELF4Q99607 663 aaPredicted RBP8.72□□□□□ -1.01
YBX3-210ENST00000540975 H2AFY2Q9P0M6 372 aaPredicted RBP8.72□□□□□ -1.01
YBX3-210ENST00000540975 SPO11Q9Y5K1 396 aa8.72□□□□□ -1.01
YBX3-210ENST00000540975 GSG1L2A8MUP6 293 aa8.71□□□□□ -1.02
YBX3-210ENST00000540975 GAS7O60861 476 aa8.71□□□□□ -1.02
YBX3-210ENST00000540975 CUTAO60888 179 aa8.71□□□□□ -1.02
YBX3-210ENST00000540975 CSF2RBP32927 897 aa8.71□□□□□ -1.02
YBX3-210ENST00000540975 ALDH6A1Q02252 535 aaKnown RBP8.71□□□□□ -1.02
YBX3-210ENST00000540975 TBC1D10BQ4KMP7 808 aaPredicted RBP8.71□□□□□ -1.02
YBX3-210ENST00000540975 REXO1L1PQ8IX06 675 aa8.71□□□□□ -1.02
YBX3-210ENST00000540975 SYN1P17600 705 aa8.7□□□□□ -1.02
YBX3-210ENST00000540975 ADCY8P40145 1251 aa8.7□□□□□ -1.02
YBX3-210ENST00000540975 SCNN1BP51168 640 aa8.7□□□□□ -1.02
YBX3-210ENST00000540975 PPP2CBP62714 309 aa8.7□□□□□ -1.02
YBX3-210ENST00000540975 PPP2CAP67775 309 aa8.7□□□□□ -1.02
YBX3-210ENST00000540975 SURF1Q15526 300 aa8.7□□□□□ -1.02
YBX3-210ENST00000540975 SEPT7Q16181 437 aaKnown RBP8.7□□□□□ -1.02
YBX3-210ENST00000540975 CHTF18Q8WVB6 975 aa8.7□□□□□ -1.02
YBX3-210ENST00000540975 E2F7Q96AV8 911 aa8.7□□□□□ -1.02
YBX3-210ENST00000540975 CARD11Q9BXL7 1154 aa8.7□□□□□ -1.02
YBX3-210ENST00000540975 ZDHHC5Q9C0B5 715 aa8.7□□□□□ -1.02
YBX3-210ENST00000540975 FBXO10Q9UK96 956 aa8.7□□□□□ -1.02
YBX3-210ENST00000540975 PLATP00750 562 aa8.69□□□□□ -1.02
YBX3-210ENST00000540975 MOGSQ13724 837 aa8.69□□□□□ -1.02
YBX3-210ENST00000540975 EIF4HQ15056 248 aaKnown RBP8.69□□□□□ -1.02
YBX3-210ENST00000540975 GPR155Q7Z3F1 870 aa8.69□□□□□ -1.02
YBX3-210ENST00000540975 PLEKHH3Q7Z736 793 aa8.69□□□□□ -1.02
YBX3-210ENST00000540975 FOXB1Q99853 325 aa8.69□□□□□ -1.02
YBX3-210ENST00000540975 THG1LQ9NWX6 298 aaKnown RBP8.69□□□□□ -1.02
YBX3-210ENST00000540975 CDC42EP3Q9UKI2 254 aa8.69□□□□□ -1.02
YBX3-210ENST00000540975 LAMTOR5O43504 91 aa8.68□□□□□ -1.02
YBX3-210ENST00000540975 PDE8AO60658 829 aa8.68□□□□□ -1.02
YBX3-210ENST00000540975 ZNF888P0CJ79 500 aaPredicted RBP8.68□□□□□ -1.02
YBX3-210ENST00000540975 APEX1P27695 318 aaKnown RBP8.68□□□□□ -1.02
YBX3-210ENST00000540975 SLC6A3Q01959 620 aa8.68□□□□□ -1.02
YBX3-210ENST00000540975 PLP2Q04941 152 aa8.68□□□□□ -1.02
YBX3-210ENST00000540975 USP10Q14694 798 aaKnown RBP8.68□□□□□ -1.02
YBX3-210ENST00000540975 EPHA7Q15375 998 aa8.68□□□□□ -1.02
YBX3-210ENST00000540975 TAF7LQ5H9L4 462 aa8.68□□□□□ -1.02
YBX3-210ENST00000540975 ARHGEF18Q6ZSZ5 1173 aa8.68□□□□□ -1.02
YBX3-210ENST00000540975 NME9Q86XW9 330 aa8.68□□□□□ -1.02
YBX3-210ENST00000540975 SMC1BQ8NDV3 1235 aa8.68□□□□□ -1.02
YBX3-210ENST00000540975 LEO1Q8WVC0 666 aaPredicted RBP8.68□□□□□ -1.02
YBX3-210ENST00000540975 MAML3Q96JK9 1138 aa8.68□□□□□ -1.02
YBX3-210ENST00000540975 RBM15Q96T37 977 aaKnown RBP eCLIP8.68□□□□□ -1.02
YBX3-210ENST00000540975 BDH2Q9BUT1 245 aa8.68□□□□□ -1.02
YBX3-210ENST00000540975 SLKQ9H2G2 1235 aaPredicted RBP8.68□□□□□ -1.02
YBX3-210ENST00000540975 TOMM22Q9NS69 142 aa8.68□□□□□ -1.02
YBX3-210ENST00000540975 MAPRE3Q9UPY8 281 aa8.68□□□□□ -1.02
YBX3-210ENST00000540975 PTPN22Q9Y2R2 807 aa8.68□□□□□ -1.02
YBX3-210ENST00000540975 ZNF536O15090 1300 aa8.68□□□□□ -1.02
YBX3-210ENST00000540975 A0A0G2JNJ9 132 aa8.67□□□□□ -1.02
YBX3-210ENST00000540975 PRLP01236 227 aa8.67□□□□□ -1.02
YBX3-210ENST00000540975 ETV4P43268 484 aa8.67□□□□□ -1.02
YBX3-210ENST00000540975 KCNQ1P51787 676 aa8.67□□□□□ -1.02
YBX3-210ENST00000540975 TTC38Q5R3I4 469 aa8.67□□□□□ -1.02
YBX3-210ENST00000540975 ERICH6BQ5W0A0 696 aa8.67□□□□□ -1.02
YBX3-210ENST00000540975 OTOP2Q7RTS6 562 aa8.67□□□□□ -1.02
YBX3-210ENST00000540975 RALYLQ86SE5 291 aaKnown RBP8.67□□□□□ -1.02
YBX3-210ENST00000540975 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.67□□□□□ -1.02
YBX3-210ENST00000540975 Q9UFV3 132 aa8.67□□□□□ -1.02
YBX3-210ENST00000540975 UBA6A0AVT1 1052 aaPredicted RBP8.66□□□□□ -1.02
YBX3-210ENST00000540975 ITGB3P05106 788 aa8.66□□□□□ -1.02
YBX3-210ENST00000540975 CELA3BP08861 270 aa8.66□□□□□ -1.02
YBX3-210ENST00000540975 RGS3P49796 1198 aa8.66□□□□□ -1.02
YBX3-210ENST00000540975 KPNA1P52294 538 aaPredicted RBP8.66□□□□□ -1.02
YBX3-210ENST00000540975 ROM1Q03395 351 aa8.66□□□□□ -1.02
YBX3-210ENST00000540975 ADCY1Q08828 1119 aa8.66□□□□□ -1.02
YBX3-210ENST00000540975 SART3Q15020 963 aaKnown RBP8.66□□□□□ -1.02
YBX3-210ENST00000540975 TMEM200BQ69YZ2 307 aa8.66□□□□□ -1.02
YBX3-210ENST00000540975 GRAMD4Q6IC98 578 aa8.66□□□□□ -1.02
YBX3-210ENST00000540975 ESRP1Q6NXG1 681 aaKnown RBP8.66□□□□□ -1.02
YBX3-210ENST00000540975 IFNL2Q8IZJ0 200 aa8.66□□□□□ -1.02
YBX3-210ENST00000540975 EFHBQ8N7U6 833 aa8.66□□□□□ -1.02
YBX3-210ENST00000540975 OR2W6PQ8NHA6 318 aa8.66□□□□□ -1.02
YBX3-210ENST00000540975 GPR101Q96P66 508 aaPredicted RBP8.66□□□□□ -1.02
YBX3-210ENST00000540975 PPP4R1LQ9P1A2 415 aa8.66□□□□□ -1.02
YBX3-210ENST00000540975 TGM5O43548 720 aa8.65□□□□□ -1.02
YBX3-210ENST00000540975 MAFO75444 373 aaPredicted RBP8.65□□□□□ -1.02
YBX3-210ENST00000540975 CLSTN1O94985 981 aa8.65□□□□□ -1.02
YBX3-210ENST00000540975 EPHB4P54760 987 aa8.65□□□□□ -1.02
YBX3-210ENST00000540975 SMAD3P84022 425 aaKnown RBP8.65□□□□□ -1.02
YBX3-210ENST00000540975 LCE1DQ5T752 114 aa8.65□□□□□ -1.02
YBX3-210ENST00000540975 TRIM68Q6AZZ1 485 aa8.65□□□□□ -1.02
YBX3-210ENST00000540975 SLFN12LQ6IEE8 588 aa8.65□□□□□ -1.02
YBX3-210ENST00000540975 LARP4Q71RC2 724 aaKnown RBP eCLIP8.65□□□□□ -1.02
YBX3-210ENST00000540975 PASD1Q8IV76 773 aa8.65□□□□□ -1.02
YBX3-210ENST00000540975 SCYL1Q96KG9 808 aa8.65□□□□□ -1.02
YBX3-210ENST00000540975 TUBGCP5Q96RT8 1024 aa8.65□□□□□ -1.02
YBX3-210ENST00000540975 PTPN18Q99952 460 aa8.65□□□□□ -1.02
YBX3-210ENST00000540975 SSBP3Q9BWW4 388 aaPredicted RBP8.65□□□□□ -1.02
YBX3-210ENST00000540975 SLC4A7Q9Y6M7 1214 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms