RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 CNKSR1Q969H4 720 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 KRT12Q99456 494 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 LBHD1Q9BQE6 289 aaPredicted RBP5.69□□□□□ -1.5
PROM1-220ENST00000540805 OSBPL7Q9BZF2 842 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 ATP6V0A4Q9HBG4 840 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 CNTNAP5Q8WYK1 1306 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 ADAMTS3O15072 1205 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 CAPN15O75808 1086 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 PRDX5P30044 214 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 TUBP50607 506 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 RAB27AP51159 221 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 IRX1P78414 480 aaPredicted RBP5.69□□□□□ -1.5
PROM1-220ENST00000540805 HLTFQ14527 1009 aaKnown RBP eCLIP5.69□□□□□ -1.5
PROM1-220ENST00000540805 TMTC3Q6ZXV5 915 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 DEFB132Q7Z7B7 95 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 RNF10Q8N5U6 811 aaKnown RBP5.69□□□□□ -1.5
PROM1-220ENST00000540805 ANKRD13CQ8N6S4 541 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 P3H4Q92791 437 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 ZSCAN10Q96SZ4 725 aaPredicted RBP5.69□□□□□ -1.5
PROM1-220ENST00000540805 PLCB1Q9NQ66 1216 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 MYH1P12882 1939 aa5.69□□□□□ -1.5
PROM1-220ENST00000540805 CYP2D7A0A087X1C5 515 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 A8MUI8 341 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 FAM13AO94988 1023 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 ADRA2BP18089 450 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 CALML3P27482 149 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 GNA11P29992 359 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 SCTRP47872 440 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 RASSF7Q02833 373 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 PDE4DQ08499 809 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 Q3C1V9 767 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 NAALADL2Q58DX5 795 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 ANKRD40Q6AI12 368 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 DTHD1Q6ZMT9 781 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 RUFY4Q6ZNE9 571 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 MIGA2Q7L4E1 593 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 LRRC47Q8N1G4 583 aaKnown RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 ARL10Q8N8L6 244 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 ENAHQ8N8S7 591 aaPredicted RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 KCNV2Q8TDN2 545 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.68□□□□□ -1.5
PROM1-220ENST00000540805 PRCCQ92733 491 aaPredicted RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 GLG1Q92896 1179 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 DCPSQ96C86 337 aaKnown RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 LRRC45Q96CN5 670 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 MTMR8Q96EF0 704 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 SEC16BQ96JE7 1060 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 OCEL1Q9H607 264 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 LRRC4CQ9HCJ2 640 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 FAM207AQ9NSI2 230 aaPredicted RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 ROBO3Q96MS0 1386 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 SLX4Q8IY92 1834 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 LRRC53A6NM62 1247 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 TRAPPC3O43617 180 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 DDAH1O94760 285 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 FGFR1OPO95684 399 aaKnown RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 SCG2P13521 617 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 TMOD1P28289 359 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 HOXA10P31260 410 aaPredicted RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 CACNB3P54284 484 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 BIRC3Q13489 604 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 CDC37Q16543 378 aaPredicted RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 NBPF9Q3BBW0 867 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 BZW1Q7L1Q6 419 aaKnown RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 RRAGAQ7L523 313 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 HS2ST1Q7LGA3 356 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 TCP11Q8WWU5 503 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 RSRC1Q96IZ7 334 aaKnown RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 TAF1DQ9H5J8 278 aaPredicted RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 MAGEF1Q9HAY2 307 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 GOPCQ9HD26 462 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 SALL4Q9UJQ4 1053 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 C5orf60A6NFR6 353 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 RAD51CO43502 376 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 SNUPNO95149 360 aaKnown RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 KRT13P13646 458 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 CTNNA1P35221 906 aaKnown RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 PPP2R2AP63151 447 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 XRCC4Q13426 336 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 GRAPQ13588 217 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 SLC35G1Q2M3R5 365 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 LACTB2Q53H82 288 aaPredicted RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 BRDTQ58F21 947 aaPredicted RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 CDCA2Q69YH5 1023 aaPredicted RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 EEPD1Q7L9B9 569 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 GRAPLQ8TC17 118 aaPredicted RBP5.68□□□□□ -1.5
PROM1-220ENST00000540805 HVCN1Q96D96 273 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 ZNF570Q96NI8 536 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.68□□□□□ -1.5
PROM1-220ENST00000540805 KBTBD4Q9NVX7 518 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 SLC12A6Q9UHW9 1150 aa5.68□□□□□ -1.5
PROM1-220ENST00000540805 SSU72P8A0A1W2PR75 194 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 TESPA1A2RU30 521 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 PP2D1A8MPX8 630 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 DNAJC8O75937 253 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 GHRP10912 638 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 HSD17B3P37058 310 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 GPSM2P81274 684 aa5.67□□□□□ -1.5
PROM1-220ENST00000540805 GFPT1Q06210 699 aaPredicted RBP5.67□□□□□ -1.5
PROM1-220ENST00000540805 VWA3BQ502W6 1294 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms