RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 EFCC1Q9HA90 598 aa10.56□□□□□ -0.72
PAAF1-209ENST00000540659 JPH1Q9HDC5 661 aaPredicted RBP10.56□□□□□ -0.72
PAAF1-209ENST00000540659 GABBR1Q9UBS5 961 aa10.56□□□□□ -0.72
PAAF1-209ENST00000540659 SLC9A2Q9UBY0 812 aa10.56□□□□□ -0.72
PAAF1-209ENST00000540659 COL4A3BPQ9Y5P4 624 aa10.56□□□□□ -0.72
PAAF1-209ENST00000540659 NFASCO94856 1347 aa10.56□□□□□ -0.72
PAAF1-209ENST00000540659 BACH1O14867 736 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 EIF3JO75822 258 aaKnown RBP10.55□□□□□ -0.72
PAAF1-209ENST00000540659 ECM2O94769 699 aaPredicted RBP10.55□□□□□ -0.72
PAAF1-209ENST00000540659 FGFR1OPO95684 399 aaKnown RBP10.55□□□□□ -0.72
PAAF1-209ENST00000540659 PSAPP07602 524 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 SKILP12757 684 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 GAP43P17677 238 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 RARRES1P49788 294 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 ACTR2P61160 394 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 SP2Q02086 613 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 TBX2Q13207 712 aaPredicted RBP10.55□□□□□ -0.72
PAAF1-209ENST00000540659 NOLC1Q14978 699 aaKnown RBP eCLIP10.55□□□□□ -0.72
PAAF1-209ENST00000540659 CCDC40Q4G0X9 1142 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 XKR9Q5GH70 373 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 COL13A1Q5TAT6 717 aaPredicted RBP10.55□□□□□ -0.72
PAAF1-209ENST00000540659 SWSAP1Q6NVH7 229 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 CYFIP1Q7L576 1253 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 PPFIBP1Q86W92 1011 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 KSR1Q8IVT5 923 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 FAM133AQ8N9E0 248 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 KIAA1524Q8TCG1 905 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 PTPN18Q99952 460 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 TUBGCP2Q9BSJ2 902 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 NOC4LQ9BVI4 516 aaKnown RBP10.55□□□□□ -0.72
PAAF1-209ENST00000540659 PORCNQ9H237 461 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 PRDM10Q9NQV6 1147 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 PCDHA10Q9Y5I2 948 aa10.55□□□□□ -0.72
PAAF1-209ENST00000540659 NKRFO15226 690 aaKnown RBP eCLIP10.54□□□□□ -0.72
PAAF1-209ENST00000540659 NRDCO43847 1150 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 CALUO43852 315 aaPredicted RBP10.54□□□□□ -0.72
PAAF1-209ENST00000540659 TBC1D8O95759 1140 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 PBX1P40424 430 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 NPEPPSP55786 919 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 RBL2Q08999 1139 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 ZC2HC1CQ53FD0 456 aaPredicted RBP10.54□□□□□ -0.72
PAAF1-209ENST00000540659 DNTTIP2Q5QJE6 756 aaKnown RBP10.54□□□□□ -0.72
PAAF1-209ENST00000540659 CEP135Q66GS9 1140 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 MIS18BP1Q6P0N0 1132 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 EPM2AIP1Q7L775 607 aaPredicted RBP10.54□□□□□ -0.72
PAAF1-209ENST00000540659 ANKRD23Q86SG2 305 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 C4orf19Q8IY42 314 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 SMAP1Q8IYB5 467 aaPredicted RBP10.54□□□□□ -0.72
PAAF1-209ENST00000540659 GPRC5AQ8NFJ5 357 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 RDM1Q8NG50 284 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 PCMTD1Q96MG8 357 aaPredicted RBP10.54□□□□□ -0.72
PAAF1-209ENST00000540659 SENP7Q9BQF6 1050 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 MROH8Q9H579 483 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 PARVGQ9HBI0 331 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 SLC5A4Q9NY91 659 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 SEPT9Q9UHD8 586 aaPredicted RBP10.54□□□□□ -0.72
PAAF1-209ENST00000540659 DBR1Q9UK59 544 aaKnown RBP10.54□□□□□ -0.72
PAAF1-209ENST00000540659 ODF2LQ9ULJ1 636 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 ZSWIM8A7E2V4 1837 aa10.54□□□□□ -0.72
PAAF1-209ENST00000540659 LRRC10BA6NIK2 292 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 LGALS16A8MUM7 142 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 AKR1B15C9JRZ8 316 aaPredicted RBP10.53□□□□□ -0.72
PAAF1-209ENST00000540659 K7ENM7 598 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 CLIC2O15247 247 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 STRNO43815 780 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 DKC1O60832 514 aaKnown RBP eCLIP10.53□□□□□ -0.72
PAAF1-209ENST00000540659 LYPLA2O95372 231 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 ALDH1A1P00352 501 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 TPM1P09493 284 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 SUPT20HL2P0C7V6 817 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 UBA1P22314 1058 aaKnown RBP10.53□□□□□ -0.72
PAAF1-209ENST00000540659 EDNRBP24530 442 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 GUCY2CP25092 1073 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 CASP14P31944 242 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 ICAM3P32942 547 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 LY6KQ17RY6 165 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 KNOP1Q1ED39 458 aaKnown RBP10.53□□□□□ -0.72
PAAF1-209ENST00000540659 ZCWPW2Q504Y3 356 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 ODR4Q5SWX8 454 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 FAM102BQ5T8I3 360 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 ABHD15Q6UXT9 468 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 LRRC55Q6ZSA7 311 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 CCDC60Q8IWA6 550 aaPredicted RBP10.53□□□□□ -0.72
PAAF1-209ENST00000540659 FBXO16Q8IX29 292 aaPredicted RBP10.53□□□□□ -0.72
PAAF1-209ENST00000540659 FAM178BQ8IXR5 827 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 SHCBP1Q8NEM2 672 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 ZNF507Q8TCN5 953 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 FGD4Q96M96 766 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 PARK7Q99497 189 aaKnown RBP10.53□□□□□ -0.72
PAAF1-209ENST00000540659 CFHR5Q9BXR6 569 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 IKZF4Q9H2S9 585 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 KCTD10Q9H3F6 313 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 ZNF302Q9NR11 478 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 KCND2Q9NZV8 630 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.53□□□□□ -0.72
PAAF1-209ENST00000540659 ITIH6Q6UXX5 1313 aa10.53□□□□□ -0.72
PAAF1-209ENST00000540659 MCM3APO60318 1980 aa10.52□□□□□ -0.72
PAAF1-209ENST00000540659 MYH9P35579 1960 aaKnown RBP10.52□□□□□ -0.72
PAAF1-209ENST00000540659 HTTP42858 3142 aa10.52□□□□□ -0.72
PAAF1-209ENST00000540659 GGPS1O95749 300 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms