RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 KNSTRNQ9Y448 316 aa4.91□□□□□ -1.62
TSG101-205ENST00000540555 FASNP49327 2511 aaKnown RBP4.91□□□□□ -1.62
TSG101-205ENST00000540555 UTYO14607 1347 aa4.91□□□□□ -1.62
TSG101-205ENST00000540555 MAST4O15021 2626 aa4.9□□□□□ -1.62
TSG101-205ENST00000540555 ARAP2Q8WZ64 1704 aa4.9□□□□□ -1.62
TSG101-205ENST00000540555 GRXCR1A8MXD5 290 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 WDR64B1ANS9 1081 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 SLITRK5O94991 958 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 CLTBP09497 229 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 ATF4P18848 351 aaPredicted RBP4.9□□□□□ -1.63
TSG101-205ENST00000540555 CYP2B6P20813 491 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 MCM4P33991 863 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 ID4P47928 161 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 RBM5P52756 815 aaKnown RBP eCLIP4.9□□□□□ -1.63
TSG101-205ENST00000540555 CTSWP56202 376 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 TLE2Q04725 743 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 COL9A2Q14055 689 aaPredicted RBP4.9□□□□□ -1.63
TSG101-205ENST00000540555 PKN1Q16512 942 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 TMEM240Q5SV17 173 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 SLFN12Q8IYM2 578 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 FBXL6Q8N531 539 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 MFSD2AQ8NA29 543 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 ARRDC4Q8NCT1 418 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 TTLL11Q8NHH1 800 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 RIN3Q8TB24 985 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 SPATA32Q96LK8 384 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 DPH2Q9BQC3 489 aaPredicted RBP4.9□□□□□ -1.63
TSG101-205ENST00000540555 ANTXR1Q9H6X2 564 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 CAPN10Q9HC96 672 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 MSRAQ9UJ68 235 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 EFR3BQ9Y2G0 817 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 YBX2Q9Y2T7 364 aaKnown RBP4.9□□□□□ -1.63
TSG101-205ENST00000540555 ASH1LQ9NR48 2969 aaKnown RBP4.9□□□□□ -1.63
TSG101-205ENST00000540555 ZNF521Q96K83 1311 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 ECM29Q5VYK3 1845 aa4.9□□□□□ -1.63
TSG101-205ENST00000540555 FRYLO94915 3013 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 LRRC37A2A6NM11 1700 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 GPR179Q6PRD1 2367 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.89□□□□□ -1.63
TSG101-205ENST00000540555 MED19A0JLT2 244 aaPredicted RBP4.89□□□□□ -1.63
TSG101-205ENST00000540555 EOMESO95936 686 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 HOXC6P09630 235 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 FAM87AP0C7U9 286 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 SLC5A1P13866 664 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 AIMP1Q12904 312 aaKnown RBP4.89□□□□□ -1.63
TSG101-205ENST00000540555 CCL14Q16627 93 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 LEXMQ3ZCV2 418 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 APOBEC3HQ6NTF7 200 aaKnown RBP4.89□□□□□ -1.63
TSG101-205ENST00000540555 CCDC174Q6PII3 467 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 ZNF765Q7L2R6 523 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 ANKRD33Q7Z3H0 272 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 SCYL3Q8IZE3 742 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 TOP6BLQ8N6T0 577 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 SLC43A3Q8NBI5 491 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 CCDC191Q8NCU4 936 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 PPP1R13LQ8WUF5 828 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 FAM151AQ8WW52 585 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 SEC16BQ96JE7 1060 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 ZDHHC15Q96MV8 337 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 TOX2Q96NM4 488 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 APBA2Q99767 749 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 IRF2BPLQ9H1B7 796 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 NKX2-4Q9H2Z4 354 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 SLC28A3Q9HAS3 691 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 PPT2Q9UMR5 302 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 MGAMO43451 1857 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 FLNBO75369 2602 aaKnown RBP4.89□□□□□ -1.63
TSG101-205ENST00000540555 USP24Q9UPU5 2620 aa4.89□□□□□ -1.63
TSG101-205ENST00000540555 MEIS3P2A8K0S8 358 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 TIMP1P01033 207 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 RAG1P15918 1043 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 EIF2S2P20042 333 aaKnown RBP4.88□□□□□ -1.63
TSG101-205ENST00000540555 MAPK4P31152 587 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 RGS2P41220 211 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 ACAP1Q15027 740 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 TREML2Q5T2D2 321 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 CDCP2Q5VXM1 449 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 MFSD5Q6N075 450 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 PSRC1Q6PGN9 363 aaPredicted RBP4.88□□□□□ -1.63
TSG101-205ENST00000540555 CCDC129Q6ZRS4 1044 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 MIGA2Q7L4E1 593 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 ZNF804AQ7Z570 1209 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 RBBP8NLQ8NC74 664 aaPredicted RBP4.88□□□□□ -1.63
TSG101-205ENST00000540555 FAM13CQ8NE31 585 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 ATG4CQ96DT6 458 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 HEXIM2Q96MH2 286 aaKnown RBP4.88□□□□□ -1.63
TSG101-205ENST00000540555 GREM2Q9H772 168 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 CNNM2Q9H8M5 875 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 GMIPQ9P107 970 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 KLHL3Q9UH77 587 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 TBX21Q9UL17 535 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 PCDHA11Q9Y5I1 949 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 ZHX2Q9Y6X8 837 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 U3KQE9 123 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 FAM186AA6NE01 2351 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 SPEGQ15772 3267 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 BPTFQ12830 3046 aa4.88□□□□□ -1.63
TSG101-205ENST00000540555 TCF20Q9UGU0 1960 aaKnown RBP4.87□□□□□ -1.63
TSG101-205ENST00000540555 PRR23AA6NEV1 266 aa4.87□□□□□ -1.63
TSG101-205ENST00000540555 KBTBD13C9JR72 458 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms