RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 AMACRQ9UHK6 382 aa14.94□□□□□ -0.02
BNIP3-202ENST00000540159 NAGPAQ9UK23 515 aa14.94□□□□□ -0.02
BNIP3-202ENST00000540159 TMEM110-MUSTN1A8MSY1 372 aa14.93□□□□□ -0.02
BNIP3-202ENST00000540159 NNTQ13423 1086 aa14.93□□□□□ -0.02
BNIP3-202ENST00000540159 SLFN12Q8IYM2 578 aa14.93□□□□□ -0.02
BNIP3-202ENST00000540159 RASSF4Q9H2L5 321 aa14.93□□□□□ -0.02
BNIP3-202ENST00000540159 VEZTQ9HBM0 779 aa14.93□□□□□ -0.02
BNIP3-202ENST00000540159 PRR12Q9ULL5 1215 aa14.93□□□□□ -0.02
BNIP3-202ENST00000540159 ARFGEF1Q9Y6D6 1849 aa14.93□□□□□ -0.02
BNIP3-202ENST00000540159 RPA1P27694 616 aa14.93□□□□□ -0.02
BNIP3-202ENST00000540159 USP11P51784 963 aa14.93□□□□□ -0.02
BNIP3-202ENST00000540159 SEMA3FQ13275 785 aa14.93□□□□□ -0.02
BNIP3-202ENST00000540159 MEI1Q5TIA1 1274 aa14.93□□□□□ -0.02
BNIP3-202ENST00000540159 LRCH2Q5VUJ6 765 aa14.93□□□□□ -0.02
BNIP3-202ENST00000540159 PALB2Q86YC2 1186 aa14.93□□□□□ -0.02
BNIP3-202ENST00000540159 SYT2Q8N9I0 419 aaPredicted RBP14.93□□□□□ -0.02
BNIP3-202ENST00000540159 FAM84AQ96KN4 292 aa14.93□□□□□ -0.02
BNIP3-202ENST00000540159 GLIS2Q9BZE0 524 aaPredicted RBP14.93□□□□□ -0.02
BNIP3-202ENST00000540159 ACP6Q9NPH0 428 aa14.93□□□□□ -0.02
BNIP3-202ENST00000540159 IVLP07476 585 aa14.92□□□□□ -0.02
BNIP3-202ENST00000540159 EPB41P11171 864 aaKnown RBP14.92□□□□□ -0.02
BNIP3-202ENST00000540159 FLT3P36888 993 aa14.92□□□□□ -0.02
BNIP3-202ENST00000540159 ZNF746Q6NUN9 644 aaPredicted RBP14.92□□□□□ -0.02
BNIP3-202ENST00000540159 RINT1Q6NUQ1 792 aa14.92□□□□□ -0.02
BNIP3-202ENST00000540159 AADACL2Q6P093 401 aa14.92□□□□□ -0.02
BNIP3-202ENST00000540159 IFT20Q8IY31 132 aa14.92□□□□□ -0.02
BNIP3-202ENST00000540159 SLC35C1Q96A29 364 aa14.92□□□□□ -0.02
BNIP3-202ENST00000540159 LUC7LQ9NQ29 371 aaKnown RBP14.92□□□□□ -0.02
BNIP3-202ENST00000540159 ZBTB12Q9Y330 459 aaPredicted RBP14.92□□□□□ -0.02
BNIP3-202ENST00000540159 RAD17O75943 681 aa14.92□□□□□ -0.02
BNIP3-202ENST00000540159 NT5C2P49902 561 aa14.92□□□□□ -0.02
BNIP3-202ENST00000540159 CEP85LQ5SZL2 805 aa14.92□□□□□ -0.02
BNIP3-202ENST00000540159 RBM26Q5T8P6 1007 aaKnown RBP14.92□□□□□ -0.02
BNIP3-202ENST00000540159 HHIPL2Q6UWX4 724 aa14.92□□□□□ -0.02
BNIP3-202ENST00000540159 PEX26Q7Z412 305 aa14.92□□□□□ -0.02
BNIP3-202ENST00000540159 ZSWIM2Q8NEG5 633 aa14.92□□□□□ -0.02
BNIP3-202ENST00000540159 CCDC17Q96LX7 622 aa14.92□□□□□ -0.02
BNIP3-202ENST00000540159 INPP4AQ96PE3 977 aaPredicted RBP14.92□□□□□ -0.02
BNIP3-202ENST00000540159 TAS2R14Q9NYV8 317 aa14.92□□□□□ -0.02
BNIP3-202ENST00000540159 NR2E1Q9Y466 385 aa14.92□□□□□ -0.02
BNIP3-202ENST00000540159 ZNF233A6NK53 670 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 LIG3P49916 1009 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 ERVK-9P63128 1117 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 CBWD6Q4V339 395 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 CBWD3Q5JTY5 395 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 CBWD5Q5RIA9 395 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 METTL13Q8N6R0 699 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 HOOK2Q96ED9 719 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 ABCB11O95342 1321 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 TGFB1I1O43294 461 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 SORBS3O60504 671 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 GNA14O95837 355 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 NPR1P16066 1061 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 SEC24CP53992 1094 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 HYIQ5T013 277 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 FAM186BQ8IYM0 893 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 RNF10Q8N5U6 811 aaKnown RBP14.91□□□□□ -0.02
BNIP3-202ENST00000540159 NEUROG2Q9H2A3 272 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 LTBP4Q8N2S1 1624 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 IGSF9BQ9UPX0 1349 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 DDX3XO00571 662 aaKnown RBP eCLIP14.91□□□□□ -0.025e-21■■■■□ 24
BNIP3-202ENST00000540159 EVI5O60447 810 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 ARP10275 920 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 ODR4Q5SWX8 454 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 GBP6Q6ZN66 633 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 SYCP3Q8IZU3 236 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 CPXCR1Q8N123 301 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 USP38Q8NB14 1042 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 UHMK1Q8TAS1 419 aaKnown RBP14.91□□□□□ -0.02
BNIP3-202ENST00000540159 ZDHHC15Q96MV8 337 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 LRRC4CQ9HCJ2 640 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 AIPL1Q9NZN9 384 aa14.91□□□□□ -0.02
BNIP3-202ENST00000540159 SMIM23A6NLE4 172 aa14.9□□□□□ -0.02
BNIP3-202ENST00000540159 KRIT1O00522 736 aa14.9□□□□□ -0.02
BNIP3-202ENST00000540159 CALUO43852 315 aaPredicted RBP14.9□□□□□ -0.02
BNIP3-202ENST00000540159 KIF4AO95239 1232 aa14.9□□□□□ -0.02
BNIP3-202ENST00000540159 TMEM179Q6ZVK1 233 aa14.9□□□□□ -0.02
BNIP3-202ENST00000540159 IQCDQ96DY2 449 aa14.9□□□□□ -0.02
BNIP3-202ENST00000540159 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.9□□□□□ -0.02
BNIP3-202ENST00000540159 VAV3Q9UKW4 847 aa14.9□□□□□ -0.02
BNIP3-202ENST00000540159 NOC2LQ9Y3T9 749 aaKnown RBP14.9□□□□□ -0.02
BNIP3-202ENST00000540159 GAS7O60861 476 aa14.9□□□□□ -0.02
BNIP3-202ENST00000540159 PRLRP16471 622 aa14.9□□□□□ -0.02
BNIP3-202ENST00000540159 EPHA7Q15375 998 aa14.9□□□□□ -0.02
BNIP3-202ENST00000540159 DACT2Q5SW24 774 aa14.9□□□□□ -0.02
BNIP3-202ENST00000540159 DCAF4Q8WV16 495 aa14.9□□□□□ -0.02
BNIP3-202ENST00000540159 UBLCP1Q8WVY7 318 aaPredicted RBP14.9□□□□□ -0.02
BNIP3-202ENST00000540159 RNPC3Q96LT9 517 aaKnown RBP14.9□□□□□ -0.02
BNIP3-202ENST00000540159 TRIM51Q9BSJ1 452 aa14.9□□□□□ -0.02
BNIP3-202ENST00000540159 TMOD4Q9NZQ9 345 aa14.9□□□□□ -0.02
BNIP3-202ENST00000540159 NYAP2Q9P242 653 aa14.9□□□□□ -0.02
BNIP3-202ENST00000540159 PLAAQ9Y263 795 aa14.9□□□□□ -0.02
BNIP3-202ENST00000540159 PCDHGC5Q9Y5F6 944 aa14.9□□□□□ -0.02
BNIP3-202ENST00000540159 NHSQ6T4R5 1651 aa14.89□□□□□ -0.03
BNIP3-202ENST00000540159 RBAK-RBAKDNI3L0D1 243 aa14.89□□□□□ -0.03
BNIP3-202ENST00000540159 TTI1O43156 1089 aa14.89□□□□□ -0.03
BNIP3-202ENST00000540159 SART1O43290 800 aaKnown RBP14.89□□□□□ -0.03
BNIP3-202ENST00000540159 DAPK3O43293 454 aa14.89□□□□□ -0.03
BNIP3-202ENST00000540159 PPFIA4O75335 1185 aa14.89□□□□□ -0.03
BNIP3-202ENST00000540159 SLITRK3O94933 977 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms