RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 WASF1Q92558 559 aa8.35□□□□□ -1.07
NECAP1-204ENST00000540083 GOLGA1Q92805 767 aa8.35□□□□□ -1.07
NECAP1-204ENST00000540083 ATG4CQ96DT6 458 aa8.35□□□□□ -1.07
NECAP1-204ENST00000540083 PPP1R13BQ96KQ4 1090 aa8.35□□□□□ -1.07
NECAP1-204ENST00000540083 CALR3Q96L12 384 aaKnown RBP8.35□□□□□ -1.07
NECAP1-204ENST00000540083 NUP88Q99567 741 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-204ENST00000540083 AMNQ9BXJ7 453 aa8.35□□□□□ -1.07
NECAP1-204ENST00000540083 LRRC2Q9BYS8 371 aa8.35□□□□□ -1.07
NECAP1-204ENST00000540083 UPF3BQ9BZI7 483 aaKnown RBP8.35□□□□□ -1.07
NECAP1-204ENST00000540083 SCAND2PQ9GZW5 306 aaPredicted RBP8.35□□□□□ -1.07
NECAP1-204ENST00000540083 RANBP17Q9H2T7 1088 aaKnown RBP8.35□□□□□ -1.07
NECAP1-204ENST00000540083 RIOX1Q9H6W3 641 aa8.35□□□□□ -1.07
NECAP1-204ENST00000540083 RBPJLQ9UBG7 517 aa8.35□□□□□ -1.07
NECAP1-204ENST00000540083 MAD2L2Q9UI95 211 aa8.35□□□□□ -1.07
NECAP1-204ENST00000540083 GGA2Q9UJY4 613 aa8.35□□□□□ -1.07
NECAP1-204ENST00000540083 RAB21Q9UL25 225 aa8.35□□□□□ -1.07
NECAP1-204ENST00000540083 MRPL11Q9Y3B7 192 aaKnown RBP8.35□□□□□ -1.07
NECAP1-204ENST00000540083 ABCB11O95342 1321 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 FRMPD2Q68DX3 1309 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-204ENST00000540083 PNMA6FA0A0J9YX94 578 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 SRRM3A6NNA2 597 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-204ENST00000540083 ZBTB5O15062 677 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 ZSCAN12O43309 604 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 STX6O43752 255 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 ZEB2O60315 1214 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 SASH3O75995 380 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 FCER1AP12319 257 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 PDIA3P30101 505 aaKnown RBP8.34□□□□□ -1.07
NECAP1-204ENST00000540083 ARHGAP25P42331 645 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 MAGEA8P43361 318 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 PSMC4P43686 418 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 KRT85P78386 507 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 KCTD2Q14681 263 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 LONRF2Q1L5Z9 754 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 FILIP1LQ4L180 1135 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 KIAA1755Q5JYT7 1200 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 WDR78Q5VTH9 848 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 SNRNP48Q6IEG0 339 aaKnown RBP8.34□□□□□ -1.07
NECAP1-204ENST00000540083 PLEKHH3Q7Z736 793 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 NCAPG2Q86XI2 1143 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 FBXO11Q86XK2 927 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 ADGRF4Q8IZF3 695 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 CPXCR1Q8N123 301 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 MSANTD4Q8NCY6 345 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 CCDC26Q8TAB7 109 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 ZNF296Q8WUU4 475 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-204ENST00000540083 IRF7Q92985 503 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 POM121Q96HA1 1249 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 SUDS3Q9H7L9 328 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-204ENST00000540083 FBXO28Q9NVF7 368 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 CPSF2Q9P2I0 782 aaKnown RBP8.34□□□□□ -1.07
NECAP1-204ENST00000540083 CCPG1Q9ULG6 757 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 NID2Q14112 1375 aa8.34□□□□□ -1.07
NECAP1-204ENST00000540083 PFASO15067 1338 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 ADGRA2Q96PE1 1338 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 A0A1W2PRU2 124 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 SLC15A5A6NIM6 579 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 FOXN1O15353 648 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 GOLGA8HP0CJ92 632 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 HSPA8P11142 646 aaKnown RBP8.33□□□□□ -1.08
NECAP1-204ENST00000540083 PDCP20941 246 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 SOX11P35716 441 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 SLC16A2P36021 539 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 TXLNAP40222 546 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 ZNF165P49910 485 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 LBX1P52954 281 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 AK2P54819 239 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 PTSQ03393 145 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 SSRP1Q08945 709 aaKnown RBP8.33□□□□□ -1.08
NECAP1-204ENST00000540083 DGKZQ13574 1117 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 TMEM132BQ14DG7 1078 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 CDC37Q16543 378 aaPredicted RBP8.33□□□□□ -1.08
NECAP1-204ENST00000540083 STX1AQ16623 288 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 SLC5A9Q2M3M2 681 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 ISM2Q6H9L7 571 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 LRRC31Q6UY01 552 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 TMTC3Q6ZXV5 915 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 MAB21L3Q8N8X9 362 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 CUL5Q93034 780 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 TCEANC2Q96MN5 208 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 BPIFA3Q9BQP9 254 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 RNF26Q9BY78 433 aaPredicted RBP8.33□□□□□ -1.08
NECAP1-204ENST00000540083 UBA5Q9GZZ9 404 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 TNMDQ9H2S6 317 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 ACAD9Q9H845 621 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 VAT1LQ9HCJ6 419 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 ADD3Q9UEY8 706 aaKnown RBP8.33□□□□□ -1.08
NECAP1-204ENST00000540083 ZNF214Q9UL59 606 aaPredicted RBP8.33□□□□□ -1.08
NECAP1-204ENST00000540083 MYO6Q9UM54 1294 aa8.33□□□□□ -1.08
NECAP1-204ENST00000540083 DIS3Q9Y2L1 958 aaKnown RBP8.33□□□□□ -1.08
NECAP1-204ENST00000540083 EBAG9O00559 213 aa8.32□□□□□ -1.08
NECAP1-204ENST00000540083 LIN7AO14910 233 aaPredicted RBP8.32□□□□□ -1.08
NECAP1-204ENST00000540083 WIPF1O43516 503 aa8.32□□□□□ -1.08
NECAP1-204ENST00000540083 PFKFB2O60825 505 aa8.32□□□□□ -1.08
NECAP1-204ENST00000540083 PPFIA3O75145 1194 aa8.32□□□□□ -1.08
NECAP1-204ENST00000540083 RTN2O75298 545 aa8.32□□□□□ -1.08
NECAP1-204ENST00000540083 SNUPNO95149 360 aaKnown RBP8.32□□□□□ -1.08
NECAP1-204ENST00000540083 DEXIO95424 95 aa8.32□□□□□ -1.08
NECAP1-204ENST00000540083 XRCC5P13010 732 aaKnown RBP8.32□□□□□ -1.08
NECAP1-204ENST00000540083 ALAS1P13196 640 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms