RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 CHMP6Q96FZ7 201 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 UTP11Q9Y3A2 253 aaKnown RBP15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 IRS2Q9Y4H2 1338 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 SPDYE3A6NKU9 549 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 USP17L15C9J2P7 530 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 USP17L13C9JLJ4 530 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 USP17L11C9JVI0 530 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 USP17L18D6R9N7 530 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 USP17L22D6RA61 530 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 USP17L17D6RBQ6 530 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 USP17L19D6RCP7 530 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 USP17L20D6RJB6 530 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 BUB1BO60566 1050 aaPredicted RBP15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 GNA14O95837 355 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 GALCP54803 685 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 USP17L24Q0WX57 530 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 PPP1R7Q15435 360 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 ERMARDQ5T6L9 678 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 USP17L6PQ6QN14 398 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 RASGEF1CQ8N431 466 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 EIF1ADQ8N9N8 165 aaKnown RBP15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 FMO2Q99518 471 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 SIX2Q9NPC8 291 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 ARMCX3Q9UH62 379 aaPredicted RBP15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 BAIAP2L1Q9UHR4 511 aa15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 DDX60LQ5H9U9 1706 aaKnown RBP15.16■□□□□ 0.02
SCNN1A-215ENST00000540037 H2AFZP0C0S5 128 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 SLCO1A2P46721 670 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 MKRN4PQ13434 485 aaPredicted RBP15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 MTMR3Q13615 1198 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 NBPF9Q3BBW0 867 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 H2AFVQ71UI9 128 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 GLYCTKQ8IVS8 523 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 TEX11Q8IYF3 940 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 MARCH10Q8NA82 808 aaPredicted RBP15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 LNX1Q8TBB1 728 aaPredicted RBP15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 LRRC27Q9C0I9 530 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 ADAM7Q9H2U9 754 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 RSPH10B2B2RC85 870 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 AFPP02771 609 aaKnown RBP15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 MMEP08473 750 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 RSPH10BP0C881 870 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 PLTPP55058 493 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 ELF3P78545 371 aaPredicted RBP15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 XRCC4Q13426 336 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 FAM133BQ5BKY9 247 aaKnown RBP15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 SLFN11Q7Z7L1 901 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 RNF25Q96BH1 459 aaPredicted RBP15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 TLCD1Q96CP7 247 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 ANKRD2Q9GZV1 360 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 SNX24Q9Y343 169 aa15.15■□□□□ 0.02
SCNN1A-215ENST00000540037 CCDC188H7C350 402 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 C21orf2O43822 256 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 FLOT1O75955 427 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 TRIM37O94972 964 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 IFNAR2P48551 515 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 PABPC4Q13310 644 aaKnown RBP eCLIP15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 LACTB2Q53H82 288 aaPredicted RBP15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 NBPF5PQ86XG9 351 aaPredicted RBP15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 TEX2Q8IWB9 1127 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 LRRC34Q8IZ02 419 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 ADGRF4Q8IZF3 695 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 CCDC26Q8TAB7 109 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 TCP11Q8WWU5 503 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 HES6Q96HZ4 224 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 ZNF317Q96PQ6 595 aaPredicted RBP15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 JMJD4Q9H9V9 463 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 RTCBQ9Y3I0 505 aaKnown RBP15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 ROBO1Q9Y6N7 1651 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 PPIP5K2O43314 1243 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 EPHA7Q15375 998 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 CLEC4GQ6UXB4 293 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 SFR1Q86XK3 245 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 OLIG1Q8TAK6 271 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 SLC35G2Q8TBE7 412 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 FAM129AQ9BZQ8 928 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 AZI2Q9H6S1 392 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 TMOD4Q9NZQ9 345 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 GCNT4Q9P109 453 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 SUCLA2Q9P2R7 463 aaPredicted RBP15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 CHORDC1Q9UHD1 332 aaPredicted RBP15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 NAV1Q8NEY1 1877 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 SFI1A8K8P3 1242 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 XRCC5P13010 732 aaKnown RBP15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 POLD1P28340 1107 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 TM4SF1P30408 202 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 ORC2Q13416 577 aaPredicted RBP15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 CCDC38Q502W7 563 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 MSL1Q68DK7 614 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 PALB2Q86YC2 1186 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 FBXO25Q8TCJ0 367 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 SEC14L1Q92503 715 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 PRMT1Q99873 361 aaKnown RBP15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 ELAC2Q9BQ52 826 aaKnown RBP15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 TXLNGYQ9BZA5 131 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 SLITRK6Q9H5Y7 841 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 VEZTQ9HBM0 779 aa15.14■□□□□ 0.01
SCNN1A-215ENST00000540037 TAS2R14Q9NYV8 317 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms