RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 PSMC5P62195 406 aa20.56■□□□□ 0.88
SNRPA1-203ENST00000540017 MKRN4PQ13434 485 aaPredicted RBP20.56■□□□□ 0.88
SNRPA1-203ENST00000540017 LPIN1Q14693 890 aa20.56■□□□□ 0.88
SNRPA1-203ENST00000540017 EPHA7Q15375 998 aa20.56■□□□□ 0.88
SNRPA1-203ENST00000540017 TTC38Q5R3I4 469 aa20.56■□□□□ 0.88
SNRPA1-203ENST00000540017 DEFB123Q8N688 67 aa20.56■□□□□ 0.88
SNRPA1-203ENST00000540017 NIFKQ9BYG3 293 aaKnown RBP20.56■□□□□ 0.88
SNRPA1-203ENST00000540017 PTPRSQ13332 1948 aa20.56■□□□□ 0.88
SNRPA1-203ENST00000540017 DDX11L8A8MPP1 907 aa20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 P4HBP07237 508 aaKnown RBP20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 QARSP47897 775 aaKnown RBP20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 DEFB103AP81534 67 aa20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 XKR3Q5GH77 459 aa20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 FBXO47Q5MNV8 452 aa20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 LARP1BQ659C4 914 aaKnown RBP20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 MCTP1Q6DN14 999 aa20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 ANO5Q75V66 913 aa20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 TMCO2Q7Z6W1 182 aaPredicted RBP20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 LINC01465Q8N7H1 131 aa20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 C4orf32Q8N8J7 132 aa20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 DYDC2Q96IM9 177 aa20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 TTYH1Q9H313 450 aaPredicted RBP20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 CDHR5Q9HBB8 845 aa20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 SEPT9Q9UHD8 586 aaPredicted RBP20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 CEP131Q9UPN4 1083 aa20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 YBX2Q9Y2T7 364 aaKnown RBP20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 GBF1Q92538 1859 aa20.55■□□□□ 0.88
SNRPA1-203ENST00000540017 ABHD14A-ACY1A0A1B0GW23 586 aa20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 MYOGP15173 224 aa20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 TRAPPC10P48553 1259 aa20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 CLCN3P51790 818 aa20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 IKBKEQ14164 716 aa20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 CTTNQ14247 550 aaKnown RBP20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 MTERF2Q49AM1 385 aa20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 IER5Q5VY09 327 aa20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.54■□□□□ 0.887e-6■□□□□ 8.4
SNRPA1-203ENST00000540017 NME8Q8N427 588 aa20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 LRRC71Q8N4P6 559 aa20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 METTL13Q8N6R0 699 aa20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 FAM161BQ96MY7 647 aa20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 LXNQ9BS40 222 aa20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 CELF4Q9BZC1 486 aaKnown RBP20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 AGO3Q9H9G7 860 aaKnown RBP20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 PCDHB6Q9Y5E3 794 aa20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 TRPV2Q9Y5S1 764 aa20.54■□□□□ 0.88
SNRPA1-203ENST00000540017 POTEMA6NI47 508 aa20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 H3BQV1 296 aa20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 K7ELQ4 463 aaPredicted RBP20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 ZBTB39O15060 712 aa20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 SLITRK3O94933 977 aa20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 VTNP04004 478 aa20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 RPLP2P05387 115 aaKnown RBP20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 CYP4A11Q02928 519 aa20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 ORC2Q13416 577 aaPredicted RBP20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 PLA2G4FQ68DD2 849 aa20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 EFCAB12Q6NXP0 572 aa20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 ZNF579Q8NAF0 562 aaKnown RBP20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 SEPT8Q92599 483 aa20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 PPP1R16BQ96T49 567 aa20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 SLC9A7Q96T83 725 aa20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 EIF2AK1Q9BQI3 630 aaKnown RBP20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 IFIH1Q9BYX4 1025 aaKnown RBP20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 MTMR10Q9NXD2 777 aa20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 NOL7Q9UMY1 257 aaKnown RBP20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 CHD9Q3L8U1 2897 aa20.53■□□□□ 0.88
SNRPA1-203ENST00000540017 MAGEB2O15479 319 aa20.52■□□□□ 0.88
SNRPA1-203ENST00000540017 OR52Z1P0C646 297 aa20.52■□□□□ 0.88
SNRPA1-203ENST00000540017 KCNJ6P48051 423 aa20.52■□□□□ 0.88
SNRPA1-203ENST00000540017 NPEPPSP55786 919 aa20.52■□□□□ 0.88
SNRPA1-203ENST00000540017 ZNF697Q5TEC3 545 aa20.52■□□□□ 0.88
SNRPA1-203ENST00000540017 HERC6Q8IVU3 1022 aa20.52■□□□□ 0.88
SNRPA1-203ENST00000540017 C4orf19Q8IY42 314 aa20.52■□□□□ 0.88
SNRPA1-203ENST00000540017 PHOSPHO2Q8TCD6 241 aa20.52■□□□□ 0.88
SNRPA1-203ENST00000540017 SNX21Q969T3 373 aa20.52■□□□□ 0.88
SNRPA1-203ENST00000540017 TIFAQ96CG3 184 aa20.52■□□□□ 0.88
SNRPA1-203ENST00000540017 HSD17B14Q9BPX1 270 aa20.52■□□□□ 0.88
SNRPA1-203ENST00000540017 SEMA6BQ9H3T3 888 aa20.52■□□□□ 0.88
SNRPA1-203ENST00000540017 FOXD4L1Q9NU39 408 aa20.52■□□□□ 0.88
SNRPA1-203ENST00000540017 LOXHD1Q8IVV2 1947 aa20.52■□□□□ 0.88
SNRPA1-203ENST00000540017 KDM3AQ9Y4C1 1321 aa20.52■□□□□ 0.87
SNRPA1-203ENST00000540017 MICAL3Q7RTP6 2002 aa20.51■□□□□ 0.87
SNRPA1-203ENST00000540017 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.51■□□□□ 0.87
SNRPA1-203ENST00000540017 M0QZ92 97 aa20.51■□□□□ 0.87
SNRPA1-203ENST00000540017 CD52P31358 61 aa20.51■□□□□ 0.87
SNRPA1-203ENST00000540017 TECP42680 631 aa20.51■□□□□ 0.87
SNRPA1-203ENST00000540017 TBC1D8BQ0IIM8 1120 aa20.51■□□□□ 0.87
SNRPA1-203ENST00000540017 DRP2Q13474 957 aa20.51■□□□□ 0.87
SNRPA1-203ENST00000540017 TSHZ1Q6ZSZ6 1077 aa20.51■□□□□ 0.87
SNRPA1-203ENST00000540017 TPH2Q8IWU9 490 aa20.51■□□□□ 0.87
SNRPA1-203ENST00000540017 TMEM40Q8WWA1 233 aa20.51■□□□□ 0.87
SNRPA1-203ENST00000540017 NKX2-4Q9H2Z4 354 aa20.51■□□□□ 0.87
SNRPA1-203ENST00000540017 SUGCTQ9HAC7 445 aa20.51■□□□□ 0.87
SNRPA1-203ENST00000540017 PCDHA11Q9Y5I1 949 aa20.51■□□□□ 0.87
SNRPA1-203ENST00000540017 CDH23Q9H251 3354 aa20.51■□□□□ 0.87
SNRPA1-203ENST00000540017 IGKV6-21A0A0C4DH24 114 aa20.5■□□□□ 0.87
SNRPA1-203ENST00000540017 EFCAB14O75071 495 aa20.5■□□□□ 0.87
SNRPA1-203ENST00000540017 GPR32O75388 356 aa20.5■□□□□ 0.87
SNRPA1-203ENST00000540017 PTGDRQ13258 359 aa20.5■□□□□ 0.87
SNRPA1-203ENST00000540017 RAB30Q15771 203 aa20.5■□□□□ 0.87
SNRPA1-203ENST00000540017 KIZQ2M2Z5 673 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms