RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 RSPH3Q86UC2 560 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 MICU3Q86XE3 530 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 FBXL16Q8N461 479 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 EFHBQ8N7U6 833 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 POP1Q99575 1024 aaKnown RBP17.04■□□□□ 0.32
USB1-203ENST00000539737 PLVAPQ9BX97 442 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 SMOC2Q9H3U7 446 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 SMARCAD1Q9H4L7 1026 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 PSTPIP2Q9H939 334 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 PCDHA6Q9UN73 950 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 PCDHA8Q9Y5H6 950 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 CYP46A1Q9Y6A2 500 aa17.04■□□□□ 0.32
USB1-203ENST00000539737 TBKBP1A7MCY6 615 aa17.03■□□□□ 0.32
USB1-203ENST00000539737 LOC730098B7Z3J9 87 aa17.03■□□□□ 0.32
USB1-203ENST00000539737 ZBTB43O43298 467 aa17.03■□□□□ 0.32
USB1-203ENST00000539737 FGFR1P11362 822 aa17.03■□□□□ 0.32
USB1-203ENST00000539737 CPA1P15085 419 aa17.03■□□□□ 0.32
USB1-203ENST00000539737 SMARCA1P28370 1054 aa17.03■□□□□ 0.32
USB1-203ENST00000539737 ITGB3BPQ13352 177 aaPredicted RBP17.03■□□□□ 0.32
USB1-203ENST00000539737 SPOUT1Q5T280 376 aaKnown RBP17.03■□□□□ 0.32
USB1-203ENST00000539737 LLGL2Q6P1M3 1020 aa17.03■□□□□ 0.32
USB1-203ENST00000539737 RUFY3Q7L099 469 aa17.03■□□□□ 0.32
USB1-203ENST00000539737 TRMT1LQ7Z2T5 733 aaKnown RBP17.03■□□□□ 0.32
USB1-203ENST00000539737 FEZF2Q8TBJ5 459 aa17.03■□□□□ 0.32
USB1-203ENST00000539737 MICAL1Q8TDZ2 1067 aa17.03■□□□□ 0.32
USB1-203ENST00000539737 TLE6Q9H808 572 aa17.03■□□□□ 0.32
USB1-203ENST00000539737 ZSWIM6Q9HCJ5 1215 aa17.03■□□□□ 0.32
USB1-203ENST00000539737 JPH1Q9HDC5 661 aaPredicted RBP17.03■□□□□ 0.32
USB1-203ENST00000539737 JADE2Q9NQC1 790 aa17.03■□□□□ 0.32
USB1-203ENST00000539737 RBM28Q9NW13 759 aaKnown RBP17.03■□□□□ 0.32
USB1-203ENST00000539737 TMEM260Q9NX78 707 aa17.03■□□□□ 0.32
USB1-203ENST00000539737 NOC2LQ9Y3T9 749 aaKnown RBP17.03■□□□□ 0.32
USB1-203ENST00000539737 EVPLQ92817 2033 aa17.03■□□□□ 0.32
USB1-203ENST00000539737 IGSF9BQ9UPX0 1349 aa17.02■□□□□ 0.32
USB1-203ENST00000539737 KLF18A0A0U1RQI7 1052 aa17.02■□□□□ 0.32
USB1-203ENST00000539737 ADAMTS3O15072 1205 aa17.02■□□□□ 0.32
USB1-203ENST00000539737 ACTR2P61160 394 aa17.02■□□□□ 0.32
USB1-203ENST00000539737 COASYQ13057 564 aa17.02■□□□□ 0.32
USB1-203ENST00000539737 PLPP4Q5VZY2 271 aa17.02■□□□□ 0.32
USB1-203ENST00000539737 Q6ZUG5 572 aa17.02■□□□□ 0.32
USB1-203ENST00000539737 HEATR3Q7Z4Q2 680 aa17.02■□□□□ 0.32
USB1-203ENST00000539737 P2RX5Q93086 422 aa17.02■□□□□ 0.32
USB1-203ENST00000539737 CELF4Q9BZC1 486 aaKnown RBP17.02■□□□□ 0.32
USB1-203ENST00000539737 SLC9A2Q9UBY0 812 aa17.02■□□□□ 0.32
USB1-203ENST00000539737 CCNE2O96020 404 aa17.01■□□□□ 0.31
USB1-203ENST00000539737 MTHFD1LQ6UB35 978 aa17.01■□□□□ 0.31
USB1-203ENST00000539737 FANCBQ8NB91 859 aa17.01■□□□□ 0.31
USB1-203ENST00000539737 GIMAP8Q8ND71 665 aaPredicted RBP17.01■□□□□ 0.31
USB1-203ENST00000539737 BRF1Q92994 677 aa17.01■□□□□ 0.31
USB1-203ENST00000539737 ZNF668Q96K58 619 aaPredicted RBP17.01■□□□□ 0.31
USB1-203ENST00000539737 AGXT2Q9BYV1 514 aa17.01■□□□□ 0.31
USB1-203ENST00000539737 ERVK-5Q9HDB9 667 aa17.01■□□□□ 0.31
USB1-203ENST00000539737 KCNH7Q9NS40 1196 aa17.01■□□□□ 0.31
USB1-203ENST00000539737 LRFN2Q9ULH4 789 aa17.01■□□□□ 0.31
USB1-203ENST00000539737 NID2Q14112 1375 aa17.01■□□□□ 0.31
USB1-203ENST00000539737 GOLGA8AA7E2F4 631 aa17■□□□□ 0.31
USB1-203ENST00000539737 GOLGA8BA8MQT2 603 aa17■□□□□ 0.31
USB1-203ENST00000539737 KRT76Q01546 638 aa17■□□□□ 0.31
USB1-203ENST00000539737 RTN1Q16799 776 aa17■□□□□ 0.31
USB1-203ENST00000539737 IER5Q5VY09 327 aa17■□□□□ 0.31
USB1-203ENST00000539737 WWC2Q6AWC2 1192 aa17■□□□□ 0.31
USB1-203ENST00000539737 XRRA1Q6P2D8 792 aa17■□□□□ 0.31
USB1-203ENST00000539737 TMTC3Q6ZXV5 915 aa17■□□□□ 0.31
USB1-203ENST00000539737 ASIC4Q96FT7 647 aa17■□□□□ 0.31
USB1-203ENST00000539737 ADAM2Q99965 735 aa17■□□□□ 0.31
USB1-203ENST00000539737 TYW1Q9NV66 732 aaKnown RBP17■□□□□ 0.31
USB1-203ENST00000539737 BRPF3Q9ULD4 1205 aa17■□□□□ 0.31
USB1-203ENST00000539737 NAP1L2Q9ULW6 460 aaPredicted RBP17■□□□□ 0.31
USB1-203ENST00000539737 PCDHA2Q9Y5H9 948 aa17■□□□□ 0.31
USB1-203ENST00000539737 SPTBN4Q9H254 2564 aa16.99■□□□□ 0.31
USB1-203ENST00000539737 SPDYE3A6NKU9 549 aa16.99■□□□□ 0.31
USB1-203ENST00000539737 HIDE1A8MVS5 230 aa16.99■□□□□ 0.31
USB1-203ENST00000539737 FGF18O76093 207 aa16.99■□□□□ 0.31
USB1-203ENST00000539737 WEE2P0C1S8 567 aa16.99■□□□□ 0.31
USB1-203ENST00000539737 KLRC1P26715 233 aa16.99■□□□□ 0.31
USB1-203ENST00000539737 METAP2P50579 478 aaKnown RBP eCLIP16.99■□□□□ 0.31
USB1-203ENST00000539737 STAT5BP51692 787 aa16.99■□□□□ 0.31
USB1-203ENST00000539737 CBX2Q14781 532 aaPredicted RBP16.99■□□□□ 0.31
USB1-203ENST00000539737 SUGP1Q8IWZ8 645 aaKnown RBP16.99■□□□□ 0.31
USB1-203ENST00000539737 FBXL6Q8N531 539 aa16.99■□□□□ 0.31
USB1-203ENST00000539737 COLGALT1Q8NBJ5 622 aa16.99■□□□□ 0.31
USB1-203ENST00000539737 OSMRQ99650 979 aa16.99■□□□□ 0.31
USB1-203ENST00000539737 MXRA8Q9BRK3 442 aa16.99■□□□□ 0.31
USB1-203ENST00000539737 AZI2Q9H6S1 392 aa16.99■□□□□ 0.31
USB1-203ENST00000539737 CCDC196A0A1B0GTZ2 297 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 RRN3P2A6NIE6 340 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 M0QZ92 97 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 SEC24BO95487 1268 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 STAG3L1P0CL83 205 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 TECP42680 631 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 SARSP49591 514 aaKnown RBP16.98■□□□□ 0.31
USB1-203ENST00000539737 DUSP6Q16828 381 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 KIZQ2M2Z5 673 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 KANK3Q6NY19 840 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 CCDC60Q8IWA6 550 aaPredicted RBP16.98■□□□□ 0.31
USB1-203ENST00000539737 THNSL1Q8IYQ7 743 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 ATP8B4Q8TF62 1192 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 SUSD6Q92537 303 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 CDHR1Q96JP9 859 aa16.98■□□□□ 0.31
USB1-203ENST00000539737 SNX27Q96L92 541 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms