RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 WDR5P61964 334 aaKnown RBP12.05□□□□□ -0.48
HMGA2-209ENST00000539662 MRPS6P82932 125 aaKnown RBP12.05□□□□□ -0.48
HMGA2-209ENST00000539662 SMAD3P84022 425 aaKnown RBP12.05□□□□□ -0.48
HMGA2-209ENST00000539662 CYP4A11Q02928 519 aa12.05□□□□□ -0.48
HMGA2-209ENST00000539662 CTTNQ14247 550 aaKnown RBP12.05□□□□□ -0.48
HMGA2-209ENST00000539662 LPIN1Q14693 890 aa12.05□□□□□ -0.48
HMGA2-209ENST00000539662 TARBP2Q15633 366 aaKnown RBP12.05□□□□□ -0.48
HMGA2-209ENST00000539662 PLEKHG4Q58EX7 1191 aa12.05□□□□□ -0.48
HMGA2-209ENST00000539662 ZNF484Q5JVG2 852 aa12.05□□□□□ -0.48
HMGA2-209ENST00000539662 TTC38Q5R3I4 469 aa12.05□□□□□ -0.48
HMGA2-209ENST00000539662 TAF2Q6P1X5 1199 aa12.05□□□□□ -0.48
HMGA2-209ENST00000539662 CNKSR3Q6P9H4 555 aa12.05□□□□□ -0.48
HMGA2-209ENST00000539662 ANO5Q75V66 913 aa12.05□□□□□ -0.48
HMGA2-209ENST00000539662 SPRED2Q7Z698 418 aa12.05□□□□□ -0.48
HMGA2-209ENST00000539662 RPAINQ86UA6 219 aa12.05□□□□□ -0.48
HMGA2-209ENST00000539662 LINC01465Q8N7H1 131 aa12.05□□□□□ -0.48
HMGA2-209ENST00000539662 TMEM40Q8WWA1 233 aa12.05□□□□□ -0.48
HMGA2-209ENST00000539662 TTC12Q9H892 705 aaPredicted RBP12.05□□□□□ -0.48
HMGA2-209ENST00000539662 SEPT9Q9UHD8 586 aaPredicted RBP12.05□□□□□ -0.48
HMGA2-209ENST00000539662 PCDHB6Q9Y5E3 794 aa12.05□□□□□ -0.48
HMGA2-209ENST00000539662 SLC4A7Q9Y6M7 1214 aa12.05□□□□□ -0.48
HMGA2-209ENST00000539662 COL1A2P08123 1366 aa12.05□□□□□ -0.48
HMGA2-209ENST00000539662 ARID2Q68CP9 1835 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 SMIM35A0A1B0GVV1 85 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 DDX11L8A8MPP1 907 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 MARCH6O60337 910 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 SLITRK3O94933 977 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 VTNP04004 478 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 PFKMP08237 780 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 DNAJB2P25686 324 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 NPEPPSP55786 919 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 GNL2Q13823 731 aaKnown RBP12.04□□□□□ -0.48
HMGA2-209ENST00000539662 EPHA7Q15375 998 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 IL17AQ16552 155 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 MTERF2Q49AM1 385 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 FBXO47Q5MNV8 452 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 MCTP1Q6DN14 999 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 DEFB123Q8N688 67 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 RDM1Q8NG50 284 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 NAP1L4Q99733 375 aaKnown RBP12.04□□□□□ -0.48
HMGA2-209ENST00000539662 PCDHA12Q9UN75 941 aa12.04□□□□□ -0.48
HMGA2-209ENST00000539662 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.03□□□□□ -0.48
HMGA2-209ENST00000539662 LCHNA4D1U4 455 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 CAND2O75155 1236 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 SLC34A2O95436 690 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 ATP2A2P16615 1042 aaKnown RBP12.03□□□□□ -0.48
HMGA2-209ENST00000539662 CD52P31358 61 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 TECP42680 631 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 PSMC5P62195 406 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 TMEM266Q2M3C6 531 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 LARP1BQ659C4 914 aaKnown RBP12.03□□□□□ -0.48
HMGA2-209ENST00000539662 EFCAB12Q6NXP0 572 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 FAM117BQ6P1L5 589 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 RTN4RL1Q86UN2 441 aaPredicted RBP12.03□□□□□ -0.48
HMGA2-209ENST00000539662 SLFN12Q8IYM2 578 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 METTL13Q8N6R0 699 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 LINC01599Q8WXQ3 324 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 GUCD1Q96NT3 240 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 HSD17B14Q9BPX1 270 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 EIF2AK1Q9BQI3 630 aaKnown RBP12.03□□□□□ -0.48
HMGA2-209ENST00000539662 LXNQ9BS40 222 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 NIFKQ9BYG3 293 aaKnown RBP12.03□□□□□ -0.48
HMGA2-209ENST00000539662 CELF4Q9BZC1 486 aaKnown RBP12.03□□□□□ -0.48
HMGA2-209ENST00000539662 NKX2-4Q9H2Z4 354 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 SEMA6BQ9H3T3 888 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 SUGCTQ9HAC7 445 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 NRBP2Q9NSY0 501 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 BMP2KQ9NSY1 1161 aaPredicted RBP12.03□□□□□ -0.48
HMGA2-209ENST00000539662 MTMR10Q9NXD2 777 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 GINS2Q9Y248 185 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 TRPV2Q9Y5S1 764 aa12.03□□□□□ -0.48
HMGA2-209ENST00000539662 K7ELQ4 463 aaPredicted RBP12.02□□□□□ -0.49
HMGA2-209ENST00000539662 GPR32O75388 356 aa12.02□□□□□ -0.49
HMGA2-209ENST00000539662 MED24O75448 989 aa12.02□□□□□ -0.49
HMGA2-209ENST00000539662 BAG4O95429 457 aaKnown RBP12.02□□□□□ -0.49
HMGA2-209ENST00000539662 P4HBP07237 508 aaKnown RBP12.02□□□□□ -0.49
HMGA2-209ENST00000539662 OR52Z1P0C646 297 aa12.02□□□□□ -0.49
HMGA2-209ENST00000539662 ACTN1P12814 892 aa12.02□□□□□ -0.49
HMGA2-209ENST00000539662 QARSP47897 775 aaKnown RBP12.02□□□□□ -0.49
HMGA2-209ENST00000539662 KIZQ2M2Z5 673 aa12.02□□□□□ -0.49
HMGA2-209ENST00000539662 XKR3Q5GH77 459 aa12.02□□□□□ -0.49
HMGA2-209ENST00000539662 FERMT3Q86UX7 667 aa12.02□□□□□ -0.49
HMGA2-209ENST00000539662 HERC6Q8IVU3 1022 aa12.02□□□□□ -0.49
HMGA2-209ENST00000539662 TPH2Q8IWU9 490 aa12.02□□□□□ -0.49
HMGA2-209ENST00000539662 IL27Q8NEV9 243 aa12.02□□□□□ -0.49
HMGA2-209ENST00000539662 FAM167AQ96KS9 214 aa12.02□□□□□ -0.49
HMGA2-209ENST00000539662 OSMRQ99650 979 aa12.02□□□□□ -0.49
HMGA2-209ENST00000539662 TMX1Q9H3N1 280 aa12.02□□□□□ -0.49
HMGA2-209ENST00000539662 NOC2LQ9Y3T9 749 aaKnown RBP12.02□□□□□ -0.49
HMGA2-209ENST00000539662 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.02□□□□□ -0.49
HMGA2-209ENST00000539662 COL6A3P12111 3177 aa12.02□□□□□ -0.49
HMGA2-209ENST00000539662 EYSQ5T1H1 3165 aa12.02□□□□□ -0.49
HMGA2-209ENST00000539662 IGKV6-21A0A0C4DH24 114 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 PP2D1A8MPX8 630 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 H3BQV1 296 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 CSDE1O75534 798 aaKnown RBP12.01□□□□□ -0.49
HMGA2-209ENST00000539662 BAIAP3O94812 1187 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 PARNO95453 639 aaKnown RBP12.01□□□□□ -0.49
HMGA2-209ENST00000539662 SPATA31C1P0DKV0 1188 aa12.01□□□□□ -0.49
HMGA2-209ENST00000539662 PTGDRQ13258 359 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms