RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 QARSP47897 775 aaKnown RBP18.84■□□□□ 0.61
PCDHB17P-201ENST00000539533 CASP5P51878 434 aa18.84■□□□□ 0.61
PCDHB17P-201ENST00000539533 COPB1P53618 953 aaKnown RBP18.84■□□□□ 0.61
PCDHB17P-201ENST00000539533 STXBP2Q15833 593 aa18.84■□□□□ 0.61
PCDHB17P-201ENST00000539533 UGCGQ16739 394 aa18.84■□□□□ 0.61
PCDHB17P-201ENST00000539533 FILIP1LQ4L180 1135 aa18.84■□□□□ 0.61
PCDHB17P-201ENST00000539533 TRMT1LQ7Z2T5 733 aaKnown RBP18.84■□□□□ 0.61
PCDHB17P-201ENST00000539533 PLCD3Q8N3E9 789 aa18.84■□□□□ 0.61
PCDHB17P-201ENST00000539533 C2orf69Q8N8R5 385 aa18.84■□□□□ 0.61
PCDHB17P-201ENST00000539533 SCFD1Q8WVM8 642 aa18.84■□□□□ 0.61
PCDHB17P-201ENST00000539533 N4BP3O15049 544 aa18.83■□□□□ 0.61
PCDHB17P-201ENST00000539533 PGK2P07205 417 aa18.83■□□□□ 0.61
PCDHB17P-201ENST00000539533 FKBP1BP68106 108 aa18.83■□□□□ 0.61
PCDHB17P-201ENST00000539533 KRT76Q01546 638 aa18.83■□□□□ 0.61
PCDHB17P-201ENST00000539533 NELFCDQ8IXH7 590 aa18.83■□□□□ 0.61
PCDHB17P-201ENST00000539533 GOLGA1Q92805 767 aa18.83■□□□□ 0.61
PCDHB17P-201ENST00000539533 PARD6BQ9BYG5 372 aa18.83■□□□□ 0.61
PCDHB17P-201ENST00000539533 TSPYL1Q9H0U9 437 aa18.83■□□□□ 0.61
PCDHB17P-201ENST00000539533 ARFGAP3Q9NP61 516 aa18.83■□□□□ 0.61
PCDHB17P-201ENST00000539533 CCL15-CCL14A0A0B4J2E2 113 aa18.83■□□□□ 0.6
PCDHB17P-201ENST00000539533 WDR64B1ANS9 1081 aa18.83■□□□□ 0.6
PCDHB17P-201ENST00000539533 SPATA31C2B4DYI2 1134 aa18.83■□□□□ 0.6
PCDHB17P-201ENST00000539533 EIF3JO75822 258 aaKnown RBP18.83■□□□□ 0.6
PCDHB17P-201ENST00000539533 STAM2O75886 525 aa18.83■□□□□ 0.6
PCDHB17P-201ENST00000539533 SP2Q02086 613 aa18.83■□□□□ 0.6
PCDHB17P-201ENST00000539533 MTF1Q14872 753 aa18.83■□□□□ 0.6
PCDHB17P-201ENST00000539533 CCL15Q16663 113 aa18.83■□□□□ 0.6
PCDHB17P-201ENST00000539533 GNPTABQ3T906 1256 aa18.83■□□□□ 0.6
PCDHB17P-201ENST00000539533 FAM133AQ8N9E0 248 aa18.83■□□□□ 0.6
PCDHB17P-201ENST00000539533 ANKRD20A12PQ8NF67 263 aa18.83■□□□□ 0.6
PCDHB17P-201ENST00000539533 SH2D3AQ9BRG2 576 aa18.83■□□□□ 0.6
PCDHB17P-201ENST00000539533 MRPL44Q9H9J2 332 aaKnown RBP18.83■□□□□ 0.6
PCDHB17P-201ENST00000539533 TCEAL9Q9UHQ7 104 aa18.83■□□□□ 0.6
PCDHB17P-201ENST00000539533 DOCK5Q9H7D0 1870 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 BTBD19C9JJ37 291 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 AKR1B15C9JRZ8 316 aaPredicted RBP18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 PDHXO00330 501 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 NKRFO15226 690 aaKnown RBP eCLIP18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 CETPP11597 493 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 EEF1GP26641 437 aaKnown RBP18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 SP4Q02446 784 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 CST9Q5W186 159 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 NOC3LQ8WTT2 800 aaKnown RBP18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 BRI3BPQ8WY22 251 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 PANX2Q96RD6 677 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 TMEM150BA6NC51 233 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 TBCAO75347 108 aaKnown RBP18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 CCDC175P0C221 793 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 OAS2P29728 719 aaKnown RBP18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 SFNP31947 248 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 PBX1P40424 430 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 JAK3P52333 1124 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 GTF2A2P52657 109 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 ERVK-9P63128 1117 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 ERVK-24P63145 666 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 SMC1AQ14683 1233 aaKnown RBP18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 WDR78Q5VTH9 848 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 SEPT14Q6ZU15 432 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 NEK11Q8NG66 645 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 CDHR1Q96JP9 859 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 MAGEC2Q9UBF1 373 aaPredicted RBP18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 COL4A3BPQ9Y5P4 624 aa18.82■□□□□ 0.6
PCDHB17P-201ENST00000539533 ARHGEF35A5YM69 484 aa18.81■□□□□ 0.6
PCDHB17P-201ENST00000539533 SOWAHDA6NJG2 315 aa18.81■□□□□ 0.6
PCDHB17P-201ENST00000539533 LRRC63Q05C16 580 aa18.81■□□□□ 0.6
PCDHB17P-201ENST00000539533 ZNF746Q6NUN9 644 aaPredicted RBP18.81■□□□□ 0.6
PCDHB17P-201ENST00000539533 SMCR8Q8TEV9 937 aaPredicted RBP18.81■□□□□ 0.6
PCDHB17P-201ENST00000539533 CNOT6LQ96LI5 555 aaKnown RBP18.81■□□□□ 0.6
PCDHB17P-201ENST00000539533 FEZ2Q9UHY8 353 aaPredicted RBP18.81■□□□□ 0.6
PCDHB17P-201ENST00000539533 PCDHA10Q9Y5I2 948 aa18.81■□□□□ 0.6
PCDHB17P-201ENST00000539533 ZCWPW2Q504Y3 356 aa18.81■□□□□ 0.6
PCDHB17P-201ENST00000539533 PORCNQ9H237 461 aa18.81■□□□□ 0.6
PCDHB17P-201ENST00000539533 JPH1Q9HDC5 661 aaPredicted RBP18.81■□□□□ 0.6
PCDHB17P-201ENST00000539533 PNMA3Q9UL41 463 aa18.81■□□□□ 0.6
PCDHB17P-201ENST00000539533 FAM13AO94988 1023 aa18.8■□□□□ 0.6
PCDHB17P-201ENST00000539533 MYBP10242 640 aa18.8■□□□□ 0.6
PCDHB17P-201ENST00000539533 YWHABP31946 246 aaKnown RBP18.8■□□□□ 0.6
PCDHB17P-201ENST00000539533 PSMC5P62195 406 aa18.8■□□□□ 0.6
PCDHB17P-201ENST00000539533 PADI6Q6TGC4 694 aa18.8■□□□□ 0.6
PCDHB17P-201ENST00000539533 MYCT1Q8N699 235 aa18.8■□□□□ 0.6
PCDHB17P-201ENST00000539533 SENP7Q9BQF6 1050 aa18.8■□□□□ 0.6
PCDHB17P-201ENST00000539533 FUT8Q9BYC5 575 aa18.8■□□□□ 0.6
PCDHB17P-201ENST00000539533 IRX2Q9BZI1 471 aaPredicted RBP18.8■□□□□ 0.6
PCDHB17P-201ENST00000539533 KCTD10Q9H3F6 313 aa18.8■□□□□ 0.6
PCDHB17P-201ENST00000539533 EFCC1Q9HA90 598 aa18.8■□□□□ 0.6
PCDHB17P-201ENST00000539533 ZCCHC17Q9NP64 241 aaKnown RBP18.8■□□□□ 0.6
PCDHB17P-201ENST00000539533 LYPLA2O95372 231 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 ITGBL1O95965 494 aaPredicted RBP18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 EDNRBP24530 442 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 RARRES1P49788 294 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 SPRYD7Q5W111 196 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 MAEAQ7L5Y9 396 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 EPM2AIP1Q7L775 607 aaPredicted RBP18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 C4orf19Q8IY42 314 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 MMP19Q99542 508 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 TSG101Q99816 390 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 TUBGCP2Q9BSJ2 902 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 SLC9A2Q9UBY0 812 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 NFASCO94856 1347 aa18.79■□□□□ 0.6
PCDHB17P-201ENST00000539533 PRPF6O94906 941 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms