RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CTSHP09668 335 aa14.68□□□□□ -0.06
CHFR-216ENST00000538235 CKBP12277 381 aa14.68□□□□□ -0.06
CHFR-216ENST00000538235 CSF2RAP15509 400 aa14.68□□□□□ -0.06
CHFR-216ENST00000538235 SLC26A2P50443 739 aa14.68□□□□□ -0.06
CHFR-216ENST00000538235 CLCN3P51790 818 aa14.68□□□□□ -0.06
CHFR-216ENST00000538235 PTK7Q13308 1070 aa14.68□□□□□ -0.06
CHFR-216ENST00000538235 GRB10Q13322 594 aa14.68□□□□□ -0.06
CHFR-216ENST00000538235 MTERF2Q49AM1 385 aa14.68□□□□□ -0.06
CHFR-216ENST00000538235 SPECC1Q5M775 1068 aa14.68□□□□□ -0.06
CHFR-216ENST00000538235 LRRC71Q8N4P6 559 aa14.68□□□□□ -0.06
CHFR-216ENST00000538235 LINC00301Q8NCQ3 95 aa14.68□□□□□ -0.06
CHFR-216ENST00000538235 PIGOQ8TEQ8 1089 aa14.68□□□□□ -0.06
CHFR-216ENST00000538235 NIFKQ9BYG3 293 aaKnown RBP14.68□□□□□ -0.06
CHFR-216ENST00000538235 ZSCAN16Q9H4T2 348 aaPredicted RBP14.68□□□□□ -0.06
CHFR-216ENST00000538235 XPNPEP1Q9NQW7 623 aa14.68□□□□□ -0.06
CHFR-216ENST00000538235 A0A087X0B3 334 aa14.67□□□□□ -0.06
CHFR-216ENST00000538235 TLR3O15455 904 aaKnown RBP14.67□□□□□ -0.06
CHFR-216ENST00000538235 MARCH6O60337 910 aa14.67□□□□□ -0.06
CHFR-216ENST00000538235 NBNO60934 754 aa14.67□□□□□ -0.06
CHFR-216ENST00000538235 LYPLA2O95372 231 aa14.67□□□□□ -0.06
CHFR-216ENST00000538235 KLRC1P26715 233 aa14.67□□□□□ -0.06
CHFR-216ENST00000538235 TMEM62Q0P6H9 643 aa14.67□□□□□ -0.06
CHFR-216ENST00000538235 C9orf50Q5SZB4 431 aa14.67□□□□□ -0.06
CHFR-216ENST00000538235 TPH2Q8IWU9 490 aa14.67□□□□□ -0.06
CHFR-216ENST00000538235 C4orf19Q8IY42 314 aa14.67□□□□□ -0.06
CHFR-216ENST00000538235 CKAP2LQ8IYA6 745 aa14.67□□□□□ -0.06
CHFR-216ENST00000538235 DNAJB3Q8WWF6 145 aa14.67□□□□□ -0.06
CHFR-216ENST00000538235 PPP1R16BQ96T49 567 aa14.67□□□□□ -0.06
CHFR-216ENST00000538235 FAM49AQ9H0Q0 323 aaPredicted RBP14.67□□□□□ -0.06
CHFR-216ENST00000538235 CSRNP2Q9H175 543 aa14.67□□□□□ -0.06
CHFR-216ENST00000538235 CDHR5Q9HBB8 845 aa14.67□□□□□ -0.06
CHFR-216ENST00000538235 TCEAL9Q9UHQ7 104 aa14.67□□□□□ -0.06
CHFR-216ENST00000538235 IGKV6-21A0A0C4DH24 114 aa14.66□□□□□ -0.06
CHFR-216ENST00000538235 DDX11L8A8MPP1 907 aa14.66□□□□□ -0.06
CHFR-216ENST00000538235 LAD1O00515 517 aa14.66□□□□□ -0.06
CHFR-216ENST00000538235 CHRNA1P02708 482 aa14.66□□□□□ -0.06
CHFR-216ENST00000538235 IQCF3P0C7M6 154 aa14.66□□□□□ -0.06
CHFR-216ENST00000538235 ACRP10323 421 aa14.66□□□□□ -0.06
CHFR-216ENST00000538235 YWHABP31946 246 aaKnown RBP14.66□□□□□ -0.06
CHFR-216ENST00000538235 SLC39A14Q15043 492 aa14.66□□□□□ -0.06
CHFR-216ENST00000538235 XKR3Q5GH77 459 aa14.66□□□□□ -0.06
CHFR-216ENST00000538235 ARL6IP4Q66PJ3 421 aaKnown RBP14.66□□□□□ -0.06
CHFR-216ENST00000538235 KIAA0319LQ8IZA0 1049 aa14.66□□□□□ -0.06
CHFR-216ENST00000538235 SNX29Q8TEQ0 813 aa14.66□□□□□ -0.06
CHFR-216ENST00000538235 ZNF668Q96K58 619 aaPredicted RBP14.66□□□□□ -0.06
CHFR-216ENST00000538235 POLR3CQ9BUI4 534 aaPredicted RBP14.66□□□□□ -0.06
CHFR-216ENST00000538235 SEZ6LQ9BYH1 1024 aa14.66□□□□□ -0.06
CHFR-216ENST00000538235 LRWD1Q9UFC0 647 aa14.66□□□□□ -0.06
CHFR-216ENST00000538235 PCDHA2Q9Y5H9 948 aa14.66□□□□□ -0.06
CHFR-216ENST00000538235 MORC2Q9Y6X9 1032 aaPredicted RBP14.66□□□□□ -0.06
CHFR-216ENST00000538235 KIAA1671Q9BY89 1806 aa14.66□□□□□ -0.06
CHFR-216ENST00000538235 E9PMD0 336 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 PITPNM1O00562 1244 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 VTNP04004 478 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 RAG1P15918 1043 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 RPA1P27694 616 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 RARRES1P49788 294 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 TMEM119Q4V9L6 283 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 ZNF484Q5JVG2 852 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 HYIQ5T013 277 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 AXDND1Q5T1B0 1012 aaPredicted RBP14.65□□□□□ -0.06
CHFR-216ENST00000538235 MFSD5Q6N075 450 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 CHRDL2Q6WN34 429 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 DTHD1Q6ZMT9 781 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 LRRC8DQ7L1W4 858 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 TMEM40Q8WWA1 233 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 EPSTI1Q96J88 318 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 FAM167AQ96KS9 214 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 PLIN2Q99541 437 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 ZSWIM4Q9H7M6 989 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 TUFT1Q9NNX1 390 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 CYP26B1Q9NR63 512 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 NR2E3Q9Y5X4 410 aa14.65□□□□□ -0.06
CHFR-216ENST00000538235 RRN3P2A6NIE6 340 aa14.64□□□□□ -0.07
CHFR-216ENST00000538235 SELPP16109 830 aa14.64□□□□□ -0.07
CHFR-216ENST00000538235 THPOP40225 353 aa14.64□□□□□ -0.07
CHFR-216ENST00000538235 CCT6AP40227 531 aaKnown RBP14.64□□□□□ -0.07
CHFR-216ENST00000538235 PDIA5Q14554 519 aa14.64□□□□□ -0.07
CHFR-216ENST00000538235 KARSQ15046 597 aaKnown RBP14.64□□□□□ -0.07
CHFR-216ENST00000538235 TMEM266Q2M3C6 531 aa14.64□□□□□ -0.07
CHFR-216ENST00000538235 FAM26DQ5JW98 314 aa14.64□□□□□ -0.07
CHFR-216ENST00000538235 NEK9Q8TD19 979 aa14.64□□□□□ -0.07
CHFR-216ENST00000538235 DHX33Q9H6R0 707 aaKnown RBP14.64□□□□□ -0.07
CHFR-216ENST00000538235 GDPD2Q9HCC8 539 aa14.64□□□□□ -0.07
CHFR-216ENST00000538235 POLD4Q9HCU8 107 aa14.64□□□□□ -0.07
CHFR-216ENST00000538235 BLOC1S4Q9NUP1 217 aa14.64□□□□□ -0.07
CHFR-216ENST00000538235 DDX19AQ9NUU7 478 aaKnown RBP14.64□□□□□ -0.07
CHFR-216ENST00000538235 NOD1Q9Y239 953 aa14.64□□□□□ -0.07
CHFR-216ENST00000538235 SRPRBQ9Y5M8 271 aaKnown RBP14.64□□□□□ -0.07
CHFR-216ENST00000538235 CDY2AQ9Y6F7 541 aa14.64□□□□□ -0.07
CHFR-216ENST00000538235 SMIM35A0A1B0GVV1 85 aa14.63□□□□□ -0.07
CHFR-216ENST00000538235 MAFO75444 373 aaPredicted RBP14.63□□□□□ -0.07
CHFR-216ENST00000538235 YEATS4O95619 227 aa14.63□□□□□ -0.07
CHFR-216ENST00000538235 NAALADL2Q58DX5 795 aa14.63□□□□□ -0.07
CHFR-216ENST00000538235 XKR9Q5GH70 373 aa14.63□□□□□ -0.07
CHFR-216ENST00000538235 PRPF38BQ5VTL8 546 aaKnown RBP14.63□□□□□ -0.07
CHFR-216ENST00000538235 SHC4Q6S5L8 630 aa14.63□□□□□ -0.07
CHFR-216ENST00000538235 RPAINQ86UA6 219 aa14.63□□□□□ -0.07
CHFR-216ENST00000538235 KSR1Q8IVT5 923 aa14.63□□□□□ -0.07
CHFR-216ENST00000538235 CAGE1Q8TC20 777 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms