RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 AXIN2Q9Y2T1 843 aa12.06□□□□□ -0.48
LINC00346-201ENST00000538077 E9PMD0 336 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 PI4K2BG5E9Z4 385 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 UPP2O95045 317 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 ASNSP08243 561 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 NCF2P19878 526 aaPredicted RBP12.05□□□□□ -0.48
LINC00346-201ENST00000538077 MX2P20592 715 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 EPHA10Q5JZY3 1008 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 FOXP4Q8IVH2 680 aaPredicted RBP12.05□□□□□ -0.48
LINC00346-201ENST00000538077 CEP95Q96GE4 821 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 TTC1Q99614 292 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 NGRNQ9NPE2 291 aaKnown RBP12.05□□□□□ -0.48
LINC00346-201ENST00000538077 TLK1Q9UKI8 766 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 ITM2BQ9Y287 266 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 TRIM49BA6NDI0 452 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 CYP2E1P05181 493 aaPredicted RBP12.05□□□□□ -0.48
LINC00346-201ENST00000538077 HADHAP40939 763 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 ZNF699Q32M78 642 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 FRA10AC1Q70Z53 315 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 IFT43Q96FT9 208 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 TTC25Q96NG3 672 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 CD209Q9NNX6 404 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 GABBR1Q9UBS5 961 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 AFF4Q9UHB7 1163 aaKnown RBP12.05□□□□□ -0.48
LINC00346-201ENST00000538077 RWDD2AQ9UIY3 292 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 SART1O43290 800 aaKnown RBP12.05□□□□□ -0.48
LINC00346-201ENST00000538077 MYBP10242 640 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 TRAPPC10P48553 1259 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 MFSD14CQ5VZR4 134 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 THOC1Q96FV9 657 aaKnown RBP12.05□□□□□ -0.48
LINC00346-201ENST00000538077 POLR3FQ9H1D9 316 aaPredicted RBP12.05□□□□□ -0.48
LINC00346-201ENST00000538077 PDE11AQ9HCR9 933 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 RNF146Q9NTX7 359 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 CLDN3O15551 220 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 ESRRBO95718 433 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 CIITAP33076 1130 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 JAK3P52333 1124 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 FAM117BQ6P1L5 589 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 ADGRF4Q8IZF3 695 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 N4BP2L2Q92802 583 aaPredicted RBP12.05□□□□□ -0.48
LINC00346-201ENST00000538077 HEMGNQ9BXL5 484 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 TET3O43151 1660 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 RNF123Q5XPI4 1314 aa12.05□□□□□ -0.48
LINC00346-201ENST00000538077 MTMR2Q13614 643 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 SFR1Q86XK3 245 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 GSDMAQ96QA5 445 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 EIF3CLB5ME19 914 aaKnown RBP12.04□□□□□ -0.48
LINC00346-201ENST00000538077 hCG_1984214I3L0E3 225 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 ZBTB5O15062 677 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 CYP27B1O15528 508 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 ZNF853P0CG23 659 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 TCP1P17987 556 aaKnown RBP12.04□□□□□ -0.48
LINC00346-201ENST00000538077 TCP11X2Q5H9J9 407 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 TRIM67Q6ZTA4 783 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 ZNF713Q8N859 430 aaPredicted RBP12.04□□□□□ -0.48
LINC00346-201ENST00000538077 OXER1Q8TDS5 423 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 EIF3CQ99613 913 aaKnown RBP12.04□□□□□ -0.48
LINC00346-201ENST00000538077 MAP3K4Q9Y6R4 1608 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 ZBED1O96006 694 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 ARHGAP25P42331 645 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 ELMSAN1Q6PJG2 1045 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 KDELC2Q7Z4H8 507 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.04□□□□□ -0.48
LINC00346-201ENST00000538077 PSPC1Q8WXF1 523 aaKnown RBP12.04□□□□□ -0.48
LINC00346-201ENST00000538077 SAAL1Q96ER3 474 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 NUDCD1Q96RS6 583 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 TMEM47Q9BQJ4 181 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 BCL2L12Q9HB09 334 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 MRPL47Q9HD33 250 aaKnown RBP12.04□□□□□ -0.48
LINC00346-201ENST00000538077 INTUQ9ULD6 942 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 NPHP3-ACAD11A0A0J9YXS1 232 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 FRMD3A2A2Y4 597 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 M0QYV0 167 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 TTC4O95801 387 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 FCER1AP12319 257 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 GCLMP48507 274 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 TSPY1Q01534 308 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 LMNB2Q03252 620 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 PCGF5Q86SE9 256 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 APOBEC3FQ8IUX4 373 aaKnown RBP12.04□□□□□ -0.48
LINC00346-201ENST00000538077 HAUS4Q9H6D7 363 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 HEY1Q9Y5J3 304 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 LCP1P13796 627 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 TMEM62Q0P6H9 643 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 BBS9Q3SYG4 887 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 ZNF667Q5HYK9 610 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 STAP2Q9UGK3 403 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 DAAM1Q9Y4D1 1078 aa12.04□□□□□ -0.48
LINC00346-201ENST00000538077 NARFQ9UHQ1 456 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 AATKQ6ZMQ8 1374 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 E9PCH4 1651 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 CFLARO15519 480 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 SERPING1P05155 500 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 CPB1P15086 417 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 PHKA2P46019 1235 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 TTLL4Q14679 1199 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 POLR3EQ9NVU0 708 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 HUS1O60921 280 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 MYL1P05976 194 aa12.03□□□□□ -0.48
LINC00346-201ENST00000538077 CLTAP09496 248 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms