RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 PLCB3Q01970 1234 aa11.68□□□□□ -0.54
VPS37C-204ENST00000538036 KCNC3Q14003 757 aa11.68□□□□□ -0.54
VPS37C-204ENST00000538036 ANKRD54Q6NXT1 300 aa11.68□□□□□ -0.54
VPS37C-204ENST00000538036 THNSL1Q8IYQ7 743 aa11.68□□□□□ -0.54
VPS37C-204ENST00000538036 SRBD1Q8N5C6 995 aaKnown RBP11.68□□□□□ -0.54
VPS37C-204ENST00000538036 ZBTB10Q96DT7 871 aa11.68□□□□□ -0.54
VPS37C-204ENST00000538036 TMEM87BQ96K49 555 aa11.68□□□□□ -0.54
VPS37C-204ENST00000538036 ADAM2Q99965 735 aa11.68□□□□□ -0.54
VPS37C-204ENST00000538036 S1PR5Q9H228 398 aa11.68□□□□□ -0.54
VPS37C-204ENST00000538036 ELAC1Q9H777 363 aaKnown RBP11.68□□□□□ -0.54
VPS37C-204ENST00000538036 ERVK-5Q9HDB9 667 aa11.68□□□□□ -0.54
VPS37C-204ENST00000538036 NGRNQ9NPE2 291 aaKnown RBP11.68□□□□□ -0.54
VPS37C-204ENST00000538036 TYW1Q9NV66 732 aaKnown RBP11.68□□□□□ -0.54
VPS37C-204ENST00000538036 ATG2AQ2TAZ0 1938 aa11.68□□□□□ -0.54
VPS37C-204ENST00000538036 IGKV6D-21A0A0A0MT36 114 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 CCDC69A6NI79 296 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 TBKBP1A7MCY6 615 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 C9IYK1 514 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 PROB1E7EW31 1015 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 HOXA2O43364 376 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 CHMLP26374 656 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 MCM5P33992 734 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 LIFRP42702 1097 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 GATMP50440 423 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 ERVFC1P60507 584 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 TMEM266Q2M3C6 531 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 ZNF484Q5JVG2 852 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 TTC22Q5TAA0 569 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 FAM160B1Q5W0V3 765 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 NFXL1Q6ZNB6 911 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 UBALD2Q8IYN6 164 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 KIAA0319LQ8IZA0 1049 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 ZNF710Q8N1W2 664 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 COLGALT1Q8NBJ5 622 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 VN1R2Q8NFZ6 395 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 TRAPPC12Q8WVT3 735 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 MRPS27Q92552 414 aaKnown RBP11.67□□□□□ -0.54
VPS37C-204ENST00000538036 ATOH1Q92858 354 aaPredicted RBP11.67□□□□□ -0.54
VPS37C-204ENST00000538036 MAP4K1Q92918 833 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 RIPOR3Q96MK2 946 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 MYL10Q9BUA6 226 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 ATP6V0A4Q9HBG4 840 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 TMEM161AQ9NX61 479 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 ST3GAL5Q9UNP4 418 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 NOC2LQ9Y3T9 749 aaKnown RBP11.67□□□□□ -0.54
VPS37C-204ENST00000538036 NR2E1Q9Y466 385 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 PCDHGC5Q9Y5F6 944 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 COL1A2P08123 1366 aa11.67□□□□□ -0.54
VPS37C-204ENST00000538036 PTPRZ1P23471 2315 aaPredicted RBP11.66□□□□□ -0.54
VPS37C-204ENST00000538036 DOCK5Q9H7D0 1870 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 MEIS1O00470 390 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 PRC1O43663 620 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 PLEKHA8P1O95397 391 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 PPM1AP35813 382 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 TECP42680 631 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 CRYBB1P53674 252 aaPredicted RBP11.66□□□□□ -0.54
VPS37C-204ENST00000538036 VCPP55072 806 aaKnown RBP11.66□□□□□ -0.54
VPS37C-204ENST00000538036 KRT17Q04695 432 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 UBE2SQ16763 222 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 TPRNQ4KMQ1 711 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 CEP55Q53EZ4 464 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 FAM102BQ5T8I3 360 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 ZBTB33Q86T24 672 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 NECTIN4Q96NY8 510 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 TMEM117Q9H0C3 514 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 TSHZ2Q9NRE2 1034 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 GINS2Q9Y248 185 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 TAF6LQ9Y6J9 622 aa11.66□□□□□ -0.54
VPS37C-204ENST00000538036 SGSM2O43147 1006 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 GALR2O43603 387 aaPredicted RBP11.65□□□□□ -0.54
VPS37C-204ENST00000538036 MGEA5O60502 916 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 GSPT1P15170 499 aaKnown RBP11.65□□□□□ -0.54
VPS37C-204ENST00000538036 RBM10P98175 930 aaKnown RBP11.65□□□□□ -0.54
VPS37C-204ENST00000538036 ITIH3Q06033 890 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 MTMR3Q13615 1198 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 CES5AQ6NT32 575 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 SYCE2Q6PIF2 218 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 ABHD15Q6UXT9 468 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 NIPA1Q7RTP0 329 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 FANCBQ8NB91 859 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 CYP2W1Q8TAV3 490 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 TMEM40Q8WWA1 233 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 CASP10Q92851 521 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 TCF25Q9BQ70 676 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 GLT8D2Q9H1C3 349 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 CWH43Q9H720 699 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 AGO4Q9HCK5 861 aaKnown RBP11.65□□□□□ -0.54
VPS37C-204ENST00000538036 RIC8AQ9NPQ8 531 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 SLC12A7Q9Y666 1083 aa11.65□□□□□ -0.54
VPS37C-204ENST00000538036 SH2B2O14492 632 aaPredicted RBP11.64□□□□□ -0.55
VPS37C-204ENST00000538036 BACH1O14867 736 aa11.64□□□□□ -0.55
VPS37C-204ENST00000538036 ARP10275 920 aa11.64□□□□□ -0.55
VPS37C-204ENST00000538036 PDE4AP27815 886 aa11.64□□□□□ -0.55
VPS37C-204ENST00000538036 ITGB3BPQ13352 177 aaPredicted RBP11.64□□□□□ -0.55
VPS37C-204ENST00000538036 BMS1Q14692 1282 aaKnown RBP11.64□□□□□ -0.55
VPS37C-204ENST00000538036 PPP1R18Q6NYC8 613 aa11.64□□□□□ -0.55
VPS37C-204ENST00000538036 MIS18BP1Q6P0N0 1132 aa11.64□□□□□ -0.55
VPS37C-204ENST00000538036 KCNT2Q6UVM3 1135 aa11.64□□□□□ -0.55
VPS37C-204ENST00000538036 TMTC3Q6ZXV5 915 aa11.64□□□□□ -0.55
VPS37C-204ENST00000538036 HEATR3Q7Z4Q2 680 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms