RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 BCAS3Q9H6U6 928 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 AS3MTQ9HBK9 375 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 ARFGAP3Q9NP61 516 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 AIPL1Q9NZN9 384 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 PKD2L1Q9P0L9 805 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 HDAC6Q9UBN7 1215 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 FHOD1Q9Y613 1164 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 CCDC151A5D8V7 595 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 FZD9O00144 591 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 TLR2O60603 784 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 TFRCP02786 760 aaKnown RBP17.19■□□□□ 0.34
MKS1-204ENST00000537529 PNMA6AP0CW24 399 aaPredicted RBP17.19■□□□□ 0.34
MKS1-204ENST00000537529 RASSF7Q02833 373 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 DGKZQ13574 1117 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 MTMR1Q13613 665 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 EXOC3L4Q17RC7 722 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 ODR4Q5SWX8 454 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 NBPF12Q5TAG4 269 aaPredicted RBP17.19■□□□□ 0.34
MKS1-204ENST00000537529 HS2ST1Q7LGA3 356 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 GPIHBP1Q8IV16 184 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 SCYL3Q8IZE3 742 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 ANKZF1Q9H8Y5 726 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 JRKLQ9Y4A0 524 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 PCDHB13Q9Y5F0 798 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 CD2APQ9Y5K6 639 aa17.19■□□□□ 0.34
MKS1-204ENST00000537529 CLIC2O15247 247 aa17.18■□□□□ 0.34
MKS1-204ENST00000537529 PSMC2P35998 433 aaKnown RBP17.18■□□□□ 0.34
MKS1-204ENST00000537529 GFPT1Q06210 699 aaPredicted RBP17.18■□□□□ 0.34
MKS1-204ENST00000537529 KCNA1Q09470 495 aa17.18■□□□□ 0.34
MKS1-204ENST00000537529 TCERG1LQ5VWI1 586 aa17.18■□□□□ 0.34
MKS1-204ENST00000537529 ZNF720Q7Z2F6 126 aa17.18■□□□□ 0.34
MKS1-204ENST00000537529 SMAP1Q8IYB5 467 aaPredicted RBP17.18■□□□□ 0.34
MKS1-204ENST00000537529 FAM186BQ8IYM0 893 aa17.18■□□□□ 0.34
MKS1-204ENST00000537529 GOLGA5Q8TBA6 731 aa17.18■□□□□ 0.34
MKS1-204ENST00000537529 RPGRIP1Q96KN7 1286 aa17.18■□□□□ 0.34
MKS1-204ENST00000537529 MKNK1Q9BUB5 465 aa17.18■□□□□ 0.34
MKS1-204ENST00000537529 TBC1D22BQ9NU19 505 aa17.18■□□□□ 0.34
MKS1-204ENST00000537529 DOCK1Q14185 1865 aa17.18■□□□□ 0.34
MKS1-204ENST00000537529 LOXHD1Q8IVV2 1947 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 DHX15O43143 795 aaKnown RBP17.17■□□□□ 0.34
MKS1-204ENST00000537529 HIP1RO75146 1068 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 TUBBP07437 444 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 CASP4P49662 377 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 RPS6P62753 249 aaKnown RBP17.17■□□□□ 0.34
MKS1-204ENST00000537529 MRPS9P82933 396 aaKnown RBP17.17■□□□□ 0.34
MKS1-204ENST00000537529 APBA1Q02410 837 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 KLHL30Q0D2K2 578 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 ZC2HC1CQ53FD0 456 aaPredicted RBP17.17■□□□□ 0.34
MKS1-204ENST00000537529 GBP6Q6ZN66 633 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 APOBEC3FQ8IUX4 373 aaKnown RBP17.17■□□□□ 0.34
MKS1-204ENST00000537529 SLC35C1Q96A29 364 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 TRERF1Q96PN7 1200 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 FIZ1Q96SL8 496 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 MLXIPQ9HAP2 919 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 PICK1Q9NRD5 415 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 DBR1Q9UK59 544 aaKnown RBP17.17■□□□□ 0.34
MKS1-204ENST00000537529 GTPBP10A4D1E9 387 aaKnown RBP17.17■□□□□ 0.34
MKS1-204ENST00000537529 SEC31AO94979 1220 aaKnown RBP17.17■□□□□ 0.34
MKS1-204ENST00000537529 EIF2AK2P19525 551 aaKnown RBP17.17■□□□□ 0.34
MKS1-204ENST00000537529 SPP2Q13103 211 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 ITGB3BPQ13352 177 aaPredicted RBP17.17■□□□□ 0.34
MKS1-204ENST00000537529 PGM5Q15124 567 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 KLHDC7AQ5VTJ3 777 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 PADI6Q6TGC4 694 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 TAAR1Q96RJ0 339 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 ZNF112Q9UJU3 913 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 RAB21Q9UL25 225 aa17.17■□□□□ 0.34
MKS1-204ENST00000537529 VWA5AO00534 786 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 LYPLA2O95372 231 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 MOCS3O95396 460 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 UCHL3P15374 230 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 PON1P27169 355 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 BACE1P56817 501 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 RNF207Q6ZRF8 634 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 CCDC125Q86Z20 511 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 FAM133AQ8N9E0 248 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 CAGE1Q8TC20 777 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 SPAG5Q96R06 1193 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 GBP3Q9H0R5 595 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 TCEAL9Q9UHQ7 104 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 FBXL5Q9UKA1 691 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 SAMM50Q9Y512 469 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 CAPN6Q9Y6Q1 641 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 ERLIN1O75477 346 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 ACTN1P12814 892 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 SLC9A1P19634 815 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 QARSP47897 775 aaKnown RBP17.16■□□□□ 0.34
MKS1-204ENST00000537529 MAPK7Q13164 816 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 ALCAMQ13740 583 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 SLC18A3Q16572 532 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 IQCEQ6IPM2 695 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 DPY19L2P1Q6NXN4 242 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 RNF10Q8N5U6 811 aaKnown RBP17.16■□□□□ 0.34
MKS1-204ENST00000537529 ZNF280CQ8ND82 737 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 ATG4CQ96DT6 458 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 BORCS6Q96GS4 357 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 NOX5Q96PH1 765 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 AGPAT3Q9NRZ7 376 aa17.16■□□□□ 0.34
MKS1-204ENST00000537529 BZW2Q9Y6E2 419 aaKnown RBP17.16■□□□□ 0.34
MKS1-204ENST00000537529 ZHX2Q9Y6X8 837 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms