RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ZNF654Q8IZM8 581 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 ZMAT2Q96NC0 199 aaKnown RBP5.82□□□□□ -1.48
PTPRD-213ENST00000537002 TMEM109Q9BVC6 243 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 SPZ1Q9BXG8 430 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 MCM9Q9NXL9 1143 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 AGTPBP1Q9UPW5 1226 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 WDR37Q9Y2I8 494 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 LRRC42Q9Y546 428 aa5.82□□□□□ -1.48
PTPRD-213ENST00000537002 PDS5AQ29RF7 1337 aaKnown RBP5.82□□□□□ -1.48
PTPRD-213ENST00000537002 SH2B2O14492 632 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 RNMTO43148 476 aaKnown RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 DCTN3O75935 186 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 FMNL1O95466 1100 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 FGAP02671 866 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 EIF2S1P05198 315 aaKnown RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 IDO1P14902 403 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 ZBTB17Q13105 803 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 PTGDRQ13258 359 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 PROCA1Q8NCQ7 364 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 ROPN1BQ9BZX4 212 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 SH2D4AQ9H788 454 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 ROPN1Q9HAT0 212 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 DBNLQ9UJU6 430 aaKnown RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 GDAQ9Y2T3 454 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 PCDHGC5Q9Y5F6 944 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 MROH7-TTC4A0A0A0MT08 1334 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 WDR91A4D1P6 747 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 CALB2P22676 271 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 TMOD1P28289 359 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 DEUP1Q05D60 604 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 GFPT1Q06210 699 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 LRRC41Q15345 812 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 ERMARDQ5T6L9 678 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 KLC3Q6P597 504 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 TTLL11Q8NHH1 800 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 HDAC7Q8WUI4 952 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 GPKOWQ92917 476 aaPredicted RBP eCLIP5.81□□□□□ -1.483e-12■■■■■ 70.5
PTPRD-213ENST00000537002 PRMT1Q99873 361 aaKnown RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 PACSIN2Q9UNF0 486 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 SNX24Q9Y343 169 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 MAST3O60307 1309 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 MAGEA13PA6NCF6 341 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 LAD1O00515 517 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 HOXC9P31274 260 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 FMR1Q06787 632 aaKnown RBP eCLIP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 LLGL1Q15334 1064 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 MYOCDQ8IZQ8 938 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 HIPK4Q8NE63 616 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 NDST4Q9H3R1 872 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 USP15Q9Y4E8 981 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 NID2Q14112 1375 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 SOS2Q07890 1332 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 MX2P20592 715 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 TECP42680 631 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 EIF4A1P60842 406 aaKnown RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 HAUS3Q68CZ6 603 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 CTAGE3PQ8IX95 158 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 FANCBQ8NB91 859 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 ARL8AQ96BM9 186 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 FMO2Q99518 471 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 PITPNM3Q9BZ71 974 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 DCLRE1BQ9H816 532 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 SLC5A4Q9NY91 659 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 TXNDC16Q9P2K2 825 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 CHMP2AO43633 222 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 LCA5LO95447 670 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 ACSL3O95573 720 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 KRT14P02533 472 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 NUDT17P0C025 328 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 ERFP50548 548 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 COPS2P61201 443 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 FAM98CQ17RN3 349 aaKnown RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 MAP3K21Q5TCX8 1036 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 CYP4F22Q6NT55 531 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 RFX8Q6ZV50 586 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 GRK7Q8WTQ7 553 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 RBM41Q96IZ5 413 aaKnown RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 ZFP69BQ9UJL9 534 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 GCP02774 474 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 MMP1P03956 469 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 CHN1P15882 459 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 KCNA3P22001 575 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 ORC2Q13416 577 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 FAM47AQ5JRC9 791 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 L3MBTL3Q96JM7 780 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 ZNF652Q9Y2D9 606 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 A0A0G2JND7 137 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 SMIM31A0A1B0GVY4 71 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 CAND2O75155 1236 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 FGGP02679 453 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 UBTFL6P0CB48 400 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 FDPSP14324 419 aaKnown RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 LONP1P36776 959 aaKnown RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 FXR1P51114 621 aaKnown RBP eCLIP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 DPH6Q7L8W6 267 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 NCAPG2Q86XI2 1143 aa5.81□□□□□ -1.48
PTPRD-213ENST00000537002 COL23A1Q86Y22 540 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-213ENST00000537002 PALM2Q8IXS6 379 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms