RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 SEPT8Q92599 483 aa14.82□□□□□ -0.04
PRKDC-206ENST00000536429 PPP1R16BQ96T49 567 aa14.82□□□□□ -0.04
PRKDC-206ENST00000536429 NAP1L4Q99733 375 aaKnown RBP14.82□□□□□ -0.04
PRKDC-206ENST00000536429 IFIH1Q9BYX4 1025 aaKnown RBP14.82□□□□□ -0.04
PRKDC-206ENST00000536429 CDHR5Q9HBB8 845 aa14.82□□□□□ -0.04
PRKDC-206ENST00000536429 WRAP73Q9P2S5 460 aaPredicted RBP14.82□□□□□ -0.04
PRKDC-206ENST00000536429 PCDHA11Q9Y5I1 949 aa14.82□□□□□ -0.04
PRKDC-206ENST00000536429 PRUNE2Q8WUY3 3088 aa14.82□□□□□ -0.04
PRKDC-206ENST00000536429 TMEM265A0A087WTH1 108 aa14.81□□□□□ -0.04
PRKDC-206ENST00000536429 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.81□□□□□ -0.04
PRKDC-206ENST00000536429 LCHNA4D1U4 455 aa14.81□□□□□ -0.04
PRKDC-206ENST00000536429 TBX3O15119 743 aa14.81□□□□□ -0.04
PRKDC-206ENST00000536429 CA3P07451 260 aa14.81□□□□□ -0.04
PRKDC-206ENST00000536429 CLCN3P51790 818 aa14.81□□□□□ -0.04
PRKDC-206ENST00000536429 NBR1Q14596 966 aa14.81□□□□□ -0.04
PRKDC-206ENST00000536429 TARBP2Q15633 366 aaKnown RBP14.81□□□□□ -0.04
PRKDC-206ENST00000536429 CALCRLQ16602 461 aa14.81□□□□□ -0.04
PRKDC-206ENST00000536429 NCAPH2Q6IBW4 605 aa14.81□□□□□ -0.04
PRKDC-206ENST00000536429 FAM117BQ6P1L5 589 aa14.81□□□□□ -0.04
PRKDC-206ENST00000536429 LRRC71Q8N4P6 559 aa14.81□□□□□ -0.04
PRKDC-206ENST00000536429 LINC01465Q8N7H1 131 aa14.81□□□□□ -0.04
PRKDC-206ENST00000536429 FAM167AQ96KS9 214 aa14.81□□□□□ -0.04
PRKDC-206ENST00000536429 CEP89Q96ST8 783 aa14.81□□□□□ -0.04
PRKDC-206ENST00000536429 FOXP1Q9H334 677 aaPredicted RBP14.81□□□□□ -0.04
PRKDC-206ENST00000536429 TRPV2Q9Y5S1 764 aa14.81□□□□□ -0.04
PRKDC-206ENST00000536429 MARCH6O60337 910 aa14.8□□□□□ -0.04
PRKDC-206ENST00000536429 NEMFO60524 1076 aa14.8□□□□□ -0.04
PRKDC-206ENST00000536429 VTNP04004 478 aa14.8□□□□□ -0.04
PRKDC-206ENST00000536429 GJB2P29033 226 aa14.8□□□□□ -0.04
PRKDC-206ENST00000536429 CD52P31358 61 aa14.8□□□□□ -0.04
PRKDC-206ENST00000536429 MCM7P33993 719 aa14.8□□□□□ -0.04
PRKDC-206ENST00000536429 IER5Q5VY09 327 aa14.8□□□□□ -0.04
PRKDC-206ENST00000536429 PLA2G4FQ68DD2 849 aa14.8□□□□□ -0.04
PRKDC-206ENST00000536429 TSHZ1Q6ZSZ6 1077 aa14.8□□□□□ -0.04
PRKDC-206ENST00000536429 METTL13Q8N6R0 699 aa14.8□□□□□ -0.04
PRKDC-206ENST00000536429 TMEM40Q8WWA1 233 aa14.8□□□□□ -0.04
PRKDC-206ENST00000536429 MTMR9Q96QG7 549 aa14.8□□□□□ -0.04
PRKDC-206ENST00000536429 CELF4Q9BZC1 486 aaKnown RBP14.8□□□□□ -0.04
PRKDC-206ENST00000536429 NRBP2Q9NSY0 501 aa14.8□□□□□ -0.04
PRKDC-206ENST00000536429 RGL1Q9NZL6 768 aa14.8□□□□□ -0.04
PRKDC-206ENST00000536429 SEPT9Q9UHD8 586 aaPredicted RBP14.8□□□□□ -0.04
PRKDC-206ENST00000536429 GINS2Q9Y248 185 aa14.8□□□□□ -0.04
PRKDC-206ENST00000536429 KAT6AQ92794 2004 aa14.8□□□□□ -0.04
PRKDC-206ENST00000536429 DDX11L8A8MPP1 907 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 TLL1O43897 1013 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 GJB5O95377 273 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 MCM2P49736 904 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 PSMC5P62195 406 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 DRP2Q13474 957 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 EPHA7Q15375 998 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 ZNF174Q15697 407 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 KIZQ2M2Z5 673 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 TMEM266Q2M3C6 531 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 MTERF2Q49AM1 385 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 XKR3Q5GH77 459 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 PPP2R2DQ66LE6 453 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 EFCAB12Q6NXP0 572 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 ANO5Q75V66 913 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 NOSTRINQ8IVI9 506 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 SLFN12Q8IYM2 578 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 MYOCDQ8IZQ8 938 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 NME8Q8N427 588 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
PRKDC-206ENST00000536429 LINC01599Q8WXQ3 324 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 DYDC2Q96IM9 177 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 ZNF668Q96K58 619 aaPredicted RBP14.79□□□□□ -0.04
PRKDC-206ENST00000536429 NIFKQ9BYG3 293 aaKnown RBP14.79□□□□□ -0.04
PRKDC-206ENST00000536429 PRDM12Q9H4Q4 367 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 CERS4Q9HA82 394 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 SLC28A3Q9HAS3 691 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 CEP131Q9UPN4 1083 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 STXBP5LQ9Y2K9 1186 aa14.79□□□□□ -0.04
PRKDC-206ENST00000536429 KDM3AQ9Y4C1 1321 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 EPOPA6NHQ4 379 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 ZBTB39O15060 712 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 EFCAB14O75071 495 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 GPR32O75388 356 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 BAG4O95429 457 aaKnown RBP14.78□□□□□ -0.04
PRKDC-206ENST00000536429 U2AF2P26368 475 aaKnown RBP eCLIP14.78□□□□□ -0.04
PRKDC-206ENST00000536429 TXKP42681 527 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 QARSP47897 775 aaKnown RBP14.78□□□□□ -0.04
PRKDC-206ENST00000536429 TOB1P50616 345 aaPredicted RBP14.78□□□□□ -0.04
PRKDC-206ENST00000536429 NPEPPSP55786 919 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 CYP4A11Q02928 519 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 CTTNQ14247 550 aaKnown RBP14.78□□□□□ -0.04
PRKDC-206ENST00000536429 RTN4RL1Q86UN2 441 aaPredicted RBP14.78□□□□□ -0.04
PRKDC-206ENST00000536429 APBB2Q92870 758 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 OSMRQ99650 979 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 LXNQ9BS40 222 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 TMX1Q9H3N1 280 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 TTC12Q9H892 705 aaPredicted RBP14.78□□□□□ -0.04
PRKDC-206ENST00000536429 SUGCTQ9HAC7 445 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 PADI3Q9ULW8 664 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 NOC2LQ9Y3T9 749 aaKnown RBP14.78□□□□□ -0.04
PRKDC-206ENST00000536429 A0A0C4DFX4 3053 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 PTPRSQ13332 1948 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 SIP14410 1827 aa14.78□□□□□ -0.04
PRKDC-206ENST00000536429 POTEMA6NI47 508 aa14.77□□□□□ -0.05
PRKDC-206ENST00000536429 M0QZ92 97 aa14.77□□□□□ -0.05
PRKDC-206ENST00000536429 MAGEB2O15479 319 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms