RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 MAPK8IP1Q9UQF2 711 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 LEMD3Q9Y2U8 911 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 MYH2Q9UKX2 1941 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 COL24A1Q17RW2 1714 aa6.36□□□□□ -1.39
VPS33A-203ENST00000536212 SNED1Q8TER0 1413 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 ANKRD62A6NC57 917 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 LRRIQ3A6PVS8 624 aaPredicted RBP6.35□□□□□ -1.39
VPS33A-203ENST00000536212 KLRF2D3W0D1 207 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 hCG_1984214I3L0E3 225 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 PDE2AO00408 941 aaPredicted RBP6.35□□□□□ -1.39
VPS33A-203ENST00000536212 PJA2O43164 708 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 N4BP1O75113 896 aaKnown RBP6.35□□□□□ -1.39
VPS33A-203ENST00000536212 PRPF6O94906 941 aaKnown RBP6.35□□□□□ -1.39
VPS33A-203ENST00000536212 BAG3O95817 575 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 SYF2O95926 243 aaKnown RBP6.35□□□□□ -1.39
VPS33A-203ENST00000536212 LDHBP07195 334 aaKnown RBP6.35□□□□□ -1.39
VPS33A-203ENST00000536212 IVLP07476 585 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 CAPN2P17655 700 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 GNA11P29992 359 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 GPC1P35052 558 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 LMAN1P49257 510 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 EHHADHQ08426 723 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 RAD51AP2Q09MP3 1159 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 VWA3BQ502W6 1294 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 FOXR1Q6PIV2 292 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 CCNI2Q6ZMN8 369 aaPredicted RBP6.35□□□□□ -1.39
VPS33A-203ENST00000536212 C16orf86Q6ZW13 317 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 UNC13DQ70J99 1090 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 LYSMD3Q7Z3D4 306 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 NEK8Q86SG6 692 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 KIAA1328Q86T90 577 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 TXNRD3Q86VQ6 643 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 DZIP1Q86YF9 867 aaKnown RBP6.35□□□□□ -1.39
VPS33A-203ENST00000536212 ZNF444Q8N0Y2 327 aaPredicted RBP6.35□□□□□ -1.39
VPS33A-203ENST00000536212 GUF1Q8N442 669 aaKnown RBP6.35□□□□□ -1.39
VPS33A-203ENST00000536212 ZNF713Q8N859 430 aaPredicted RBP6.35□□□□□ -1.39
VPS33A-203ENST00000536212 KIAA0895Q8NCT3 520 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 RHBDD1Q8TEB9 315 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 SH3RF3Q8TEJ3 882 aaPredicted RBP6.35□□□□□ -1.39
VPS33A-203ENST00000536212 MYO19Q96H55 970 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 CNOT6LQ96LI5 555 aaKnown RBP6.35□□□□□ -1.39
VPS33A-203ENST00000536212 MTMR9Q96QG7 549 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 MMS19Q96T76 1030 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 LACRTQ9GZZ8 138 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 SEMA6BQ9H3T3 888 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 RIOX1Q9H6W3 641 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 NHEJ1Q9H9Q4 299 aaPredicted RBP6.35□□□□□ -1.39
VPS33A-203ENST00000536212 SUGCTQ9HAC7 445 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 ZNF287Q9HBT7 754 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 C6orf50Q9HD87 102 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 CWC15Q9P013 229 aaKnown RBP6.35□□□□□ -1.39
VPS33A-203ENST00000536212 STIM2Q9P246 746 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 HPCAL4Q9UM19 191 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 PLAGL2Q9UPG8 496 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 SIK3Q9Y2K2 1263 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 FAN1Q9Y2M0 1017 aa6.35□□□□□ -1.39
VPS33A-203ENST00000536212 BAZ2AQ9UIF9 1905 aaKnown RBP6.35□□□□□ -1.39
VPS33A-203ENST00000536212 GPR75-ASB3A0A0A6YYF3 556 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 SSU72P8A0A1W2PR75 194 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 SMCO2A6NFE2 343 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 TNFRSF10BO14763 440 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 ZNF263O14978 683 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 SLC26A4O43511 780 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 KCNQ2O43526 872 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 EDIL3O43854 480 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 USO1O60763 962 aaKnown RBP6.34□□□□□ -1.39
VPS33A-203ENST00000536212 IPO7O95373 1038 aaKnown RBP6.34□□□□□ -1.39
VPS33A-203ENST00000536212 FGFR1OPO95684 399 aaKnown RBP6.34□□□□□ -1.39
VPS33A-203ENST00000536212 TSPY3P0CV98 308 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 TSPY8P0CW00 308 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 TRIM21P19474 475 aaKnown RBP6.34□□□□□ -1.39
VPS33A-203ENST00000536212 MTIF2P46199 727 aaKnown RBP6.34□□□□□ -1.39
VPS33A-203ENST00000536212 CDK8P49336 464 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 KLK7P49862 253 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 GYS2P54840 703 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 NAPAP54920 295 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 ASIC1P78348 528 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 STK4Q13043 487 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 PSMD2Q13200 908 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 GRB10Q13322 594 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 MAN2A1Q16706 1144 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 ASTE1Q2TB18 679 aaPredicted RBP6.34□□□□□ -1.39
VPS33A-203ENST00000536212 TMEM119Q4V9L6 283 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 GNASQ5JWF2 1037 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 SLC27A3Q5K4L6 730 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 FKBP15Q5T1M5 1219 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 SH3PXD2AQ5TCZ1 1133 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 IQCEQ6IPM2 695 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 ALKBH2Q6NS38 261 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 TPTE2Q6XPS3 522 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 HEATR3Q7Z4Q2 680 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 CREG2Q8IUH2 290 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 AMOTL1Q8IY63 956 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 ALDH16A1Q8IZ83 802 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 ZNF295-AS1Q8N0V1 137 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 SLC44A5Q8NCS7 719 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 TRIM58Q8NG06 486 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 COG1Q8WTW3 980 aa6.34□□□□□ -1.39
VPS33A-203ENST00000536212 RRP36Q96EU6 259 aaKnown RBP6.34□□□□□ -1.39
VPS33A-203ENST00000536212 ASB16Q96NS5 453 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms