RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 PLVAPQ9BX97 442 aa23.4■■□□□ 1.34
LTBR-205ENST00000535739 PLAGL2Q9UPG8 496 aa23.4■■□□□ 1.34
LTBR-205ENST00000535739 SNX14Q9Y5W7 946 aa23.4■■□□□ 1.34
LTBR-205ENST00000535739 FNDC1Q4ZHG4 1894 aaPredicted RBP23.4■■□□□ 1.34
LTBR-205ENST00000535739 ESYT2A0FGR8 921 aa23.39■■□□□ 1.33
LTBR-205ENST00000535739 ZBTB42B2RXF5 422 aa23.39■■□□□ 1.33
LTBR-205ENST00000535739 NCK2O43639 380 aa23.39■■□□□ 1.33
LTBR-205ENST00000535739 GPR37L1O60883 481 aa23.39■■□□□ 1.33
LTBR-205ENST00000535739 MMP1P03956 469 aa23.39■■□□□ 1.33
LTBR-205ENST00000535739 STAG3L1P0CL83 205 aa23.39■■□□□ 1.33
LTBR-205ENST00000535739 GTF2F1P35269 517 aaKnown RBP eCLIP23.39■■□□□ 1.33
LTBR-205ENST00000535739 CAMK1Q14012 370 aa23.39■■□□□ 1.33
LTBR-205ENST00000535739 CTC1Q2NKJ3 1217 aa23.39■■□□□ 1.33
LTBR-205ENST00000535739 ZNF577Q9BSK1 485 aa23.39■■□□□ 1.33
LTBR-205ENST00000535739 C6orf50Q9HD87 102 aa23.39■■□□□ 1.33
LTBR-205ENST00000535739 NOC2LQ9Y3T9 749 aaKnown RBP23.39■■□□□ 1.33
LTBR-205ENST00000535739 COL1A2P08123 1366 aa23.39■■□□□ 1.33
LTBR-205ENST00000535739 TRIOO75962 3097 aa23.39■■□□□ 1.33
LTBR-205ENST00000535739 PLXNA4Q9HCM2 1894 aa23.39■■□□□ 1.33
LTBR-205ENST00000535739 PRPF3O43395 683 aaKnown RBP23.38■■□□□ 1.33
LTBR-205ENST00000535739 MGEA5O60502 916 aa23.38■■□□□ 1.33
LTBR-205ENST00000535739 PPFIA3O75145 1194 aa23.38■■□□□ 1.33
LTBR-205ENST00000535739 HSPA4P34932 840 aa23.38■■□□□ 1.33
LTBR-205ENST00000535739 PLA2G5P39877 138 aa23.38■■□□□ 1.33
LTBR-205ENST00000535739 DLX2Q07687 328 aaPredicted RBP23.38■■□□□ 1.33
LTBR-205ENST00000535739 ZNF484Q5JVG2 852 aa23.38■■□□□ 1.33
LTBR-205ENST00000535739 BLOC1S2Q6QNY1 142 aa23.38■■□□□ 1.33
LTBR-205ENST00000535739 TRMT1LQ7Z2T5 733 aaKnown RBP23.38■■□□□ 1.33
LTBR-205ENST00000535739 REXO1Q8N1G1 1221 aaKnown RBP23.38■■□□□ 1.33
LTBR-205ENST00000535739 TMEM40Q8WWA1 233 aa23.38■■□□□ 1.33
LTBR-205ENST00000535739 P2RX5Q93086 422 aa23.38■■□□□ 1.33
LTBR-205ENST00000535739 PHKBQ93100 1093 aa23.38■■□□□ 1.33
LTBR-205ENST00000535739 IGFLR1Q9H665 355 aa23.38■■□□□ 1.33
LTBR-205ENST00000535739 ERVK-5Q9HDB9 667 aa23.38■■□□□ 1.33
LTBR-205ENST00000535739 PPP4R2Q9NY27 417 aa23.38■■□□□ 1.33
LTBR-205ENST00000535739 LRFN2Q9ULH4 789 aa23.38■■□□□ 1.33
LTBR-205ENST00000535739 RPS6KA5O75582 802 aa23.37■■□□□ 1.33
LTBR-205ENST00000535739 ITGB1P05556 798 aa23.37■■□□□ 1.33
LTBR-205ENST00000535739 DNAJB1P25685 340 aa23.37■■□□□ 1.33
LTBR-205ENST00000535739 CLUL1Q15846 466 aa23.37■■□□□ 1.33
LTBR-205ENST00000535739 CKAP2LQ8IYA6 745 aa23.37■■□□□ 1.33
LTBR-205ENST00000535739 KLHL23Q8NBE8 558 aa23.37■■□□□ 1.33
LTBR-205ENST00000535739 RASGRP4Q8TDF6 673 aa23.37■■□□□ 1.33
LTBR-205ENST00000535739 CCDC12Q8WUD4 166 aaPredicted RBP23.37■■□□□ 1.33
LTBR-205ENST00000535739 FAM122AQ96E09 287 aa23.37■■□□□ 1.33
LTBR-205ENST00000535739 PPP1R16BQ96T49 567 aa23.37■■□□□ 1.33
LTBR-205ENST00000535739 TBC1D22BQ9NU19 505 aa23.37■■□□□ 1.33
LTBR-205ENST00000535739 FAM50BQ9Y247 325 aa23.37■■□□□ 1.33
LTBR-205ENST00000535739 NID2Q14112 1375 aa23.37■■□□□ 1.33
LTBR-205ENST00000535739 SARSP49591 514 aaKnown RBP23.36■■□□□ 1.33
LTBR-205ENST00000535739 SETQ01105 290 aaPredicted RBP23.36■■□□□ 1.33
LTBR-205ENST00000535739 PRR16Q569H4 304 aa23.36■■□□□ 1.33
LTBR-205ENST00000535739 MCTP2Q6DN12 878 aa23.36■■□□□ 1.33
LTBR-205ENST00000535739 ZNF746Q6NUN9 644 aaPredicted RBP23.36■■□□□ 1.33
LTBR-205ENST00000535739 SPPL3Q8TCT6 385 aa23.36■■□□□ 1.33
LTBR-205ENST00000535739 ST3GAL5Q9UNP4 418 aa23.36■■□□□ 1.33
LTBR-205ENST00000535739 MAFBQ9Y5Q3 323 aaPredicted RBP23.36■■□□□ 1.33
LTBR-205ENST00000535739 LINC01565O15544 149 aa23.35■■□□□ 1.33
LTBR-205ENST00000535739 C22orf31O95567 290 aa23.35■■□□□ 1.33
LTBR-205ENST00000535739 RPS6KB1P23443 525 aa23.35■■□□□ 1.33
LTBR-205ENST00000535739 GNA11P29992 359 aa23.35■■□□□ 1.33
LTBR-205ENST00000535739 ZP2Q05996 745 aa23.35■■□□□ 1.33
LTBR-205ENST00000535739 KIZQ2M2Z5 673 aa23.35■■□□□ 1.33
LTBR-205ENST00000535739 NAALADL2Q58DX5 795 aa23.35■■□□□ 1.33
LTBR-205ENST00000535739 BBXQ8WY36 941 aaPredicted RBP23.35■■□□□ 1.33
LTBR-205ENST00000535739 ADAM2Q99965 735 aa23.35■■□□□ 1.33
LTBR-205ENST00000535739 HCN4Q9Y3Q4 1203 aa23.35■■□□□ 1.33
LTBR-205ENST00000535739 PCDHB7Q9Y5E2 793 aa23.35■■□□□ 1.33
LTBR-205ENST00000535739 TBX10O75333 385 aa23.34■■□□□ 1.33
LTBR-205ENST00000535739 IRS1P35568 1242 aa23.34■■□□□ 1.33
LTBR-205ENST00000535739 AKAP17AQ02040 695 aaKnown RBP23.34■■□□□ 1.33
LTBR-205ENST00000535739 NTRK3Q16288 839 aa23.34■■□□□ 1.33
LTBR-205ENST00000535739 SMAP1Q8IYB5 467 aaPredicted RBP23.34■■□□□ 1.33
LTBR-205ENST00000535739 METTL13Q8N6R0 699 aa23.34■■□□□ 1.33
LTBR-205ENST00000535739 OSMRQ99650 979 aa23.34■■□□□ 1.33
LTBR-205ENST00000535739 AGXT2Q9BYV1 514 aa23.34■■□□□ 1.33
LTBR-205ENST00000535739 GABBR1Q9UBS5 961 aa23.34■■□□□ 1.33
LTBR-205ENST00000535739 PRKAG3Q9UGI9 489 aa23.34■■□□□ 1.33
LTBR-205ENST00000535739 PCDHA10Q9Y5I2 948 aa23.34■■□□□ 1.33
LTBR-205ENST00000535739 DENND3A2RUS2 1198 aa23.33■■□□□ 1.33
LTBR-205ENST00000535739 VTNP04004 478 aa23.33■■□□□ 1.33
LTBR-205ENST00000535739 PSAPP07602 524 aa23.33■■□□□ 1.33
LTBR-205ENST00000535739 CIITAP33076 1130 aa23.33■■□□□ 1.33
LTBR-205ENST00000535739 ADAM15Q13444 863 aa23.33■■□□□ 1.33
LTBR-205ENST00000535739 ADGRD2Q7Z7M1 963 aa23.33■■□□□ 1.33
LTBR-205ENST00000535739 FBXL16Q8N461 479 aa23.33■■□□□ 1.33
LTBR-205ENST00000535739 POF1BQ8WVV4 589 aa23.33■■□□□ 1.33
LTBR-205ENST00000535739 LENG9Q96B70 501 aa23.33■■□□□ 1.33
LTBR-205ENST00000535739 SLC26A6Q9BXS9 759 aa23.33■■□□□ 1.33
LTBR-205ENST00000535739 RGS18Q9NS28 235 aa23.33■■□□□ 1.33
LTBR-205ENST00000535739 TCEAL9Q9UHQ7 104 aa23.33■■□□□ 1.33
LTBR-205ENST00000535739 GPR182O15218 404 aa23.32■■□□□ 1.32
LTBR-205ENST00000535739 MBTPS2O43462 519 aa23.32■■□□□ 1.32
LTBR-205ENST00000535739 ALADP13716 330 aa23.32■■□□□ 1.32
LTBR-205ENST00000535739 CRYBB1P53674 252 aaPredicted RBP23.32■■□□□ 1.32
LTBR-205ENST00000535739 CCT2P78371 535 aaKnown RBP23.32■■□□□ 1.32
LTBR-205ENST00000535739 SMAD2Q15796 467 aaKnown RBP23.32■■□□□ 1.32
LTBR-205ENST00000535739 ODR4Q5SWX8 454 aa23.32■■□□□ 1.32
LTBR-205ENST00000535739 FAM102BQ5T8I3 360 aa23.32■■□□□ 1.32
LTBR-205ENST00000535739 FAM228AQ86W67 206 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms