RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 FAM133BQ5BKY9 247 aaKnown RBP14.59□□□□□ -0.07
HDAC4-214ENST00000535493 GKAP1Q5VSY0 366 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-214ENST00000535493 DCAF12L1Q5VU92 463 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 HIBCHQ6NVY1 386 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-214ENST00000535493 LRIG3Q6UXM1 1119 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 RUFY4Q6ZNE9 571 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 SFR1Q86XK3 245 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 TATDN2Q93075 761 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 PBKQ96KB5 322 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 ANKRD2Q9GZV1 360 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 BAIAP2L1Q9UHR4 511 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 MYH7BA7E2Y1 1941 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 CHN1P15882 459 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 TM4SF1P30408 202 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 PPP1R7Q15435 360 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 SHROOM1Q2M3G4 852 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-214ENST00000535493 NT5DC3Q86UY8 548 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 PALB2Q86YC2 1186 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 TCP11Q8WWU5 503 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 CEP63Q96MT8 703 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 PSMD1Q99460 953 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 TAS2R14Q9NYV8 317 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 GCNT4Q9P109 453 aa14.59□□□□□ -0.07
HDAC4-214ENST00000535493 UTP11Q9Y3A2 253 aaKnown RBP14.59□□□□□ -0.07
HDAC4-214ENST00000535493 H2AFZP0C0S5 128 aa14.58□□□□□ -0.07
HDAC4-214ENST00000535493 XRCC5P13010 732 aaKnown RBP14.58□□□□□ -0.07
HDAC4-214ENST00000535493 DRD4P21917 467 aa14.58□□□□□ -0.07
HDAC4-214ENST00000535493 ACCSLQ4AC99 568 aa14.58□□□□□ -0.07
HDAC4-214ENST00000535493 CLEC4GQ6UXB4 293 aa14.58□□□□□ -0.07
HDAC4-214ENST00000535493 H2AFVQ71UI9 128 aa14.58□□□□□ -0.07
HDAC4-214ENST00000535493 PNMA8AQ86V59 439 aaPredicted RBP14.58□□□□□ -0.07
HDAC4-214ENST00000535493 WDR66Q8TBY9 1149 aa14.58□□□□□ -0.07
HDAC4-214ENST00000535493 FMO2Q99518 471 aa14.58□□□□□ -0.07
HDAC4-214ENST00000535493 PHLPP1O60346 1717 aa14.58□□□□□ -0.07
HDAC4-214ENST00000535493 SCN7AQ01118 1682 aa14.58□□□□□ -0.08
HDAC4-214ENST00000535493 AFPP02771 609 aaKnown RBP14.58□□□□□ -0.08
HDAC4-214ENST00000535493 CLTAP09496 248 aa14.58□□□□□ -0.08
HDAC4-214ENST00000535493 SLC35G2Q8TBE7 412 aa14.58□□□□□ -0.08
HDAC4-214ENST00000535493 ATP8B4Q8TF62 1192 aa14.58□□□□□ -0.08
HDAC4-214ENST00000535493 SGSM3Q96HU1 749 aa14.58□□□□□ -0.08
HDAC4-214ENST00000535493 PSTPIP2Q9H939 334 aa14.58□□□□□ -0.08
HDAC4-214ENST00000535493 MLXIPLQ9NP71 852 aa14.58□□□□□ -0.08
HDAC4-214ENST00000535493 CD2APQ9Y5K6 639 aa14.58□□□□□ -0.08
HDAC4-214ENST00000535493 MPHOSPH10O00566 681 aaKnown RBP14.57□□□□□ -0.08
HDAC4-214ENST00000535493 FLOT1O75955 427 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 CDC25CP30307 473 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 NF2P35240 595 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 BIRC3Q13489 604 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 NEDD9Q14511 834 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 FBXO25Q8TCJ0 367 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 ARHGEF26Q96DR7 871 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 ELAC2Q9BQ52 826 aaKnown RBP14.57□□□□□ -0.08
HDAC4-214ENST00000535493 REEP2Q9BRK0 252 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 MTMR4Q9NYA4 1195 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 MCM8Q9UJA3 840 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 L3MBTL1Q9Y468 752 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 PCNTO95613 3336 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 TMEM110-MUSTN1A8MSY1 372 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 MMEP08473 750 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 KRT13P13646 458 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 LRRC14Q15048 493 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 PREPLQ4J6C6 727 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-214ENST00000535493 TBC1D1Q86TI0 1168 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-214ENST00000535493 CATSPER3Q86XQ3 398 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 LNX1Q8TBB1 728 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-214ENST00000535493 MGARPQ8TDB4 240 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 CCT6BQ92526 530 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 AZI2Q9H6S1 392 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 LAMB1P07942 1786 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 CCDC88AQ3V6T2 1871 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 ZBTB39O15060 712 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 EVI5O60447 810 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 LRRN2O75325 713 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 SKAP2O75563 359 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-214ENST00000535493 ELF1P32519 619 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 SLC29A2Q14542 456 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 PRR16Q569H4 304 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 FAM182BQ5T319 152 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 RDH13Q8NBN7 331 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 CCDC26Q8TAB7 109 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 RNF25Q96BH1 459 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-214ENST00000535493 C18orf8Q96DM3 657 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 CHMP6Q96FZ7 201 aa14.57□□□□□ -0.08
HDAC4-214ENST00000535493 XPO6Q96QU8 1125 aaKnown RBP14.57□□□□□ -0.08
HDAC4-214ENST00000535493 PRMT1Q99873 361 aaKnown RBP14.57□□□□□ -0.08
HDAC4-214ENST00000535493 DBR1Q9UK59 544 aaKnown RBP14.57□□□□□ -0.08
HDAC4-214ENST00000535493 ROBO3Q96MS0 1386 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 FAM196BA6NMK8 535 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 GNA14O95837 355 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 VIMP08670 466 aaKnown RBP14.56□□□□□ -0.08
HDAC4-214ENST00000535493 FGFR4P22455 802 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 COG2Q14746 738 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 ARHGAP44Q17R89 818 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 OTUD6AQ7L8S5 288 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 LRRC34Q8IZ02 419 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 ALG3Q92685 438 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 LRRC27Q9C0I9 530 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 DHX36Q9H2U1 1008 aaKnown RBP14.56□□□□□ -0.08
HDAC4-214ENST00000535493 EPB41L4BQ9H329 900 aa14.56□□□□□ -0.08
HDAC4-214ENST00000535493 SEMA4AQ9H3S1 761 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms