RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 GJB5O95377 273 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 FDPSP14324 419 aaKnown RBP10.66□□□□□ -0.7
CDCA3-204ENST00000535406 CYP3A7P24462 503 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 SFNP31947 248 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 KRT2P35908 639 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 JAK3P52333 1124 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 MRPS6P82932 125 aaKnown RBP10.66□□□□□ -0.7
CDCA3-204ENST00000535406 ZNF484Q5JVG2 852 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 IER5Q5VY09 327 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 MTHFD1LQ6UB35 978 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.66□□□□□ -0.7
CDCA3-204ENST00000535406 PIK3AP1Q6ZUJ8 805 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 TRMT1LQ7Z2T5 733 aaKnown RBP10.66□□□□□ -0.7
CDCA3-204ENST00000535406 NEK8Q86SG6 692 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 MYOCDQ8IZQ8 938 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 SLC17A8Q8NDX2 589 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 OXER1Q8TDS5 423 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 GJA10Q969M2 543 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 FAM167AQ96KS9 214 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 MBOAT7Q96N66 472 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 OSBPL7Q9BZF2 842 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 UNC80Q8N2C7 3258 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 PRUNE2Q8WUY3 3088 aa10.66□□□□□ -0.7
CDCA3-204ENST00000535406 SMIM35A0A1B0GVV1 85 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 JAK2O60674 1132 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 PSMD10O75832 226 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 GCFC2P16383 781 aaKnown RBP10.65□□□□□ -0.7
CDCA3-204ENST00000535406 ATP4AP20648 1035 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 KLRC1P26715 233 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 FOSBP53539 338 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 TMEM62Q0P6H9 643 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 ST3GAL1Q11201 340 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 TRIM29Q14134 588 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 LPIN1Q14693 890 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 FBXO47Q5MNV8 452 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 FAM117BQ6P1L5 589 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 TSHZ1Q6ZSZ6 1077 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 ETNPPLQ8TBG4 499 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 RAD9AQ99638 391 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 NAP1L4Q99733 375 aaKnown RBP10.65□□□□□ -0.7
CDCA3-204ENST00000535406 UNC45AQ9H3U1 944 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 CEP131Q9UPN4 1083 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 LIMCH1Q9UPQ0 1083 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 TRPV2Q9Y5S1 764 aa10.65□□□□□ -0.7
CDCA3-204ENST00000535406 COL4A4P53420 1690 aaPredicted RBP10.65□□□□□ -0.7
CDCA3-204ENST00000535406 MYO9BQ13459 2157 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 LCHNA4D1U4 455 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 ZBTB42B2RXF5 422 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 SLC37A4O43826 429 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 CCNT1O60563 726 aaKnown RBP10.64□□□□□ -0.71
CDCA3-204ENST00000535406 ARHGEF15O94989 841 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 C22orf31O95567 290 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 MMP1P03956 469 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 OATP04181 439 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 IGFBP4P22692 258 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 RBM25P49756 843 aaKnown RBP10.64□□□□□ -0.71
CDCA3-204ENST00000535406 PRKCEQ02156 737 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 TAP1Q03518 808 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 NR5A1Q13285 461 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 PPP4R3AQ6IN85 833 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 MIER3Q7Z3K6 550 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 CCDC83Q8IWF9 413 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 NME8Q8N427 588 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 PIP4P2Q8N4L2 257 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 RDM1Q8NG50 284 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 ARNTL2Q8WYA1 636 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 DDX27Q96GQ7 796 aaKnown RBP10.64□□□□□ -0.71
CDCA3-204ENST00000535406 KIF2CQ99661 725 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 CERS4Q9HA82 394 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 UPF2Q9HAU5 1272 aaKnown RBP10.64□□□□□ -0.71
CDCA3-204ENST00000535406 INSL6Q9Y581 213 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 LOXHD1Q8IVV2 1947 aa10.64□□□□□ -0.71
CDCA3-204ENST00000535406 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.63□□□□□ -0.71
CDCA3-204ENST00000535406 ZNF862O60290 1169 aa10.63□□□□□ -0.71
CDCA3-204ENST00000535406 CD52P31358 61 aa10.63□□□□□ -0.71
CDCA3-204ENST00000535406 PAK2Q13177 524 aa10.63□□□□□ -0.71
CDCA3-204ENST00000535406 ADGRE1Q14246 886 aa10.63□□□□□ -0.71
CDCA3-204ENST00000535406 UGCGQ16739 394 aa10.63□□□□□ -0.71
CDCA3-204ENST00000535406 EARS2Q5JPH6 523 aaKnown RBP10.63□□□□□ -0.71
CDCA3-204ENST00000535406 KRT40Q6A162 431 aa10.63□□□□□ -0.71
CDCA3-204ENST00000535406 B3GNT9Q6UX72 402 aa10.63□□□□□ -0.71
CDCA3-204ENST00000535406 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.63□□□□□ -0.71
CDCA3-204ENST00000535406 DIS3L2Q8IYB7 885 aaKnown RBP10.63□□□□□ -0.71
CDCA3-204ENST00000535406 METTL13Q8N6R0 699 aa10.63□□□□□ -0.71
CDCA3-204ENST00000535406 USP38Q8NB14 1042 aa10.63□□□□□ -0.71
CDCA3-204ENST00000535406 TNFRSF25Q93038 417 aa10.63□□□□□ -0.71
CDCA3-204ENST00000535406 LLPHQ9BRT6 129 aaKnown RBP10.63□□□□□ -0.71
CDCA3-204ENST00000535406 CELF4Q9BZC1 486 aaKnown RBP10.63□□□□□ -0.71
CDCA3-204ENST00000535406 AGO3Q9H9G7 860 aaKnown RBP10.63□□□□□ -0.71
CDCA3-204ENST00000535406 KCNMB3Q9NPA1 279 aa10.63□□□□□ -0.71
CDCA3-204ENST00000535406 SH2B1Q9NRF2 756 aaPredicted RBP10.63□□□□□ -0.71
CDCA3-204ENST00000535406 GINS2Q9Y248 185 aa10.63□□□□□ -0.71
CDCA3-204ENST00000535406 SQORQ9Y6N5 450 aa10.63□□□□□ -0.71
CDCA3-204ENST00000535406 KDM3AQ9Y4C1 1321 aa10.63□□□□□ -0.71
CDCA3-204ENST00000535406 COL4A6Q14031 1691 aa10.63□□□□□ -0.71
CDCA3-204ENST00000535406 EVPLQ92817 2033 aa10.63□□□□□ -0.71
CDCA3-204ENST00000535406 LINC01553A4QN01 128 aa10.62□□□□□ -0.71
CDCA3-204ENST00000535406 FAM205CA6NFA0 338 aa10.62□□□□□ -0.71
CDCA3-204ENST00000535406 EPOPA6NHQ4 379 aa10.62□□□□□ -0.71
CDCA3-204ENST00000535406 TBX3O15119 743 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms