RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 RB1P06400 928 aa18.31■□□□□ 0.52
CLSTN3-204ENST00000535313 STAG3L1P0CL83 205 aa18.31■□□□□ 0.52
CLSTN3-204ENST00000535313 NFX1Q12986 1120 aaKnown RBP18.31■□□□□ 0.52
CLSTN3-204ENST00000535313 ODR4Q5SWX8 454 aa18.31■□□□□ 0.52
CLSTN3-204ENST00000535313 FAM43BQ6ZT52 329 aaPredicted RBP18.31■□□□□ 0.52
CLSTN3-204ENST00000535313 TRMT1LQ7Z2T5 733 aaKnown RBP18.31■□□□□ 0.52
CLSTN3-204ENST00000535313 NPAS4Q8IUM7 802 aa18.31■□□□□ 0.52
CLSTN3-204ENST00000535313 KIAA0319LQ8IZA0 1049 aa18.31■□□□□ 0.52
CLSTN3-204ENST00000535313 LINC01599Q8WXQ3 324 aa18.31■□□□□ 0.52
CLSTN3-204ENST00000535313 FAM167AQ96KS9 214 aa18.31■□□□□ 0.52
CLSTN3-204ENST00000535313 C11orf84Q9BUA3 381 aaPredicted RBP18.31■□□□□ 0.52
CLSTN3-204ENST00000535313 UBE2ZQ9H832 354 aaPredicted RBP18.31■□□□□ 0.52
CLSTN3-204ENST00000535313 RC3H2Q9HBD1 1191 aaKnown RBP18.31■□□□□ 0.52
CLSTN3-204ENST00000535313 ZBTB42B2RXF5 422 aa18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 C5orf67F2Z3F1 127 aa18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 MSH4O15457 936 aa18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 GAS7O60861 476 aa18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 DGKIO75912 1065 aa18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 C22orf31O95567 290 aa18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 BMPR1AP36894 532 aa18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 TMEM266Q2M3C6 531 aa18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 GALNT17Q6IS24 598 aa18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 RTN4RL1Q86UN2 441 aaPredicted RBP18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 FAM177A1Q8N128 213 aaPredicted RBP18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 METTL13Q8N6R0 699 aa18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 BANK1Q8NDB2 785 aa18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 TBCKQ8TEA7 893 aa18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 ZNF689Q96CS4 500 aaPredicted RBP18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 RIT2Q99578 217 aa18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 DISC1Q9NRI5 854 aa18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 PPP4R2Q9NY27 417 aa18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 LRFN2Q9ULH4 789 aa18.3■□□□□ 0.52
CLSTN3-204ENST00000535313 MAGEB2O15479 319 aa18.29■□□□□ 0.52
CLSTN3-204ENST00000535313 RPS6KA5O75582 802 aa18.29■□□□□ 0.52
CLSTN3-204ENST00000535313 CDKL5O76039 1030 aa18.29■□□□□ 0.52
CLSTN3-204ENST00000535313 SFNP31947 248 aa18.29■□□□□ 0.52
CLSTN3-204ENST00000535313 LRCH2Q5VUJ6 765 aa18.29■□□□□ 0.52
CLSTN3-204ENST00000535313 BLIDQ8IZY5 108 aa18.29■□□□□ 0.52
CLSTN3-204ENST00000535313 CLP1Q92989 425 aaKnown RBP18.29■□□□□ 0.52
CLSTN3-204ENST00000535313 TEKT3Q9BXF9 490 aa18.29■□□□□ 0.52
CLSTN3-204ENST00000535313 NSUN3Q9H649 340 aaKnown RBP18.29■□□□□ 0.52
CLSTN3-204ENST00000535313 NRBP2Q9NSY0 501 aa18.29■□□□□ 0.52
CLSTN3-204ENST00000535313 MYH9P35579 1960 aaKnown RBP18.29■□□□□ 0.52
CLSTN3-204ENST00000535313 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 GPR182O15218 404 aa18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 CHMP2AO43633 222 aa18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 EDIL3O43854 480 aa18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 KCNA5P22460 613 aa18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 JAK3P52333 1124 aa18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 CRYBB1P53674 252 aaPredicted RBP18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 Q4G0T1 1027 aa18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 CMTR2Q8IYT2 770 aaKnown RBP18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 DAGLBQ8NCG7 672 aa18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 SLC5A5Q92911 643 aa18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 PPP1R16BQ96T49 567 aa18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 PLVAPQ9BX97 442 aa18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 LMAN2LQ9H0V9 348 aa18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 TMX1Q9H3N1 280 aa18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 CDHR5Q9HBB8 845 aa18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 ERVK-5Q9HDB9 667 aa18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 RNF216Q9NWF9 866 aaPredicted RBP18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 NOC2LQ9Y3T9 749 aaKnown RBP18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 RALGAPA2Q2PPJ7 1873 aa18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 NLRC5Q86WI3 1866 aa18.28■□□□□ 0.52
CLSTN3-204ENST00000535313 DENND3A2RUS2 1198 aa18.27■□□□□ 0.52
CLSTN3-204ENST00000535313 OATP04181 439 aa18.27■□□□□ 0.52
CLSTN3-204ENST00000535313 LINC00271P0C7V0 271 aa18.27■□□□□ 0.52
CLSTN3-204ENST00000535313 IBSPP21815 317 aaPredicted RBP18.27■□□□□ 0.52
CLSTN3-204ENST00000535313 TMOD1P28289 359 aa18.27■□□□□ 0.52
CLSTN3-204ENST00000535313 KIZQ2M2Z5 673 aa18.27■□□□□ 0.52
CLSTN3-204ENST00000535313 LEXMQ3ZCV2 418 aa18.27■□□□□ 0.52
CLSTN3-204ENST00000535313 TCEAL5Q5H9L2 206 aa18.27■□□□□ 0.52
CLSTN3-204ENST00000535313 CRIPAKQ8N1N5 446 aa18.27■□□□□ 0.52
CLSTN3-204ENST00000535313 MAP7D2Q96T17 732 aa18.27■□□□□ 0.52
CLSTN3-204ENST00000535313 OSMRQ99650 979 aa18.27■□□□□ 0.52
CLSTN3-204ENST00000535313 SLKQ9H2G2 1235 aaPredicted RBP18.27■□□□□ 0.52
CLSTN3-204ENST00000535313 C1orf112Q9NSG2 853 aa18.27■□□□□ 0.52
CLSTN3-204ENST00000535313 ST3GAL5Q9UNP4 418 aa18.27■□□□□ 0.52
CLSTN3-204ENST00000535313 PCDHB7Q9Y5E2 793 aa18.27■□□□□ 0.52
CLSTN3-204ENST00000535313 LOXHD1Q8IVV2 1947 aa18.27■□□□□ 0.51
CLSTN3-204ENST00000535313 CYP3A7-CYP3A51PA0A087WV96 503 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 M0R2N6 131 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 VTNP04004 478 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 XBP1P17861 261 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 CYP3A7P24462 503 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 SARSP49591 514 aaKnown RBP18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 CLCN3P51790 818 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 PRKCEQ02156 737 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 SCRN1Q12765 414 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 NONOQ15233 471 aaKnown RBP eCLIP18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 ERICH6BQ5W0A0 696 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 EFCAB12Q6NXP0 572 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 KRT25Q7Z3Z0 450 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 ZNF710Q8N1W2 664 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 RDM1Q8NG50 284 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 TMEM40Q8WWA1 233 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 AIFM3Q96NN9 605 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 ADAM2Q99965 735 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 UNC45AQ9H3U1 944 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 AKT3Q9Y243 479 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms