RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 C2orf71A6NGG8 1288 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 POTEMA6NI47 508 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 SPATA31C2B4DYI2 1134 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 PPP1R11O60927 126 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-206ENST00000535290 CFHP08603 1231 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 FGFR1P11362 822 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 MARK3P27448 753 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 PDE4AP27815 886 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 MRPS9P82933 396 aaKnown RBP9.61□□□□□ -0.87
CLIP1-206ENST00000535290 TBC1D8BQ0IIM8 1120 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 PAK2Q13177 524 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 COL9A3Q14050 684 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-206ENST00000535290 POTEGQ6S5H5 508 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 LRRC55Q6ZSA7 311 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 FCHSD1Q86WN1 690 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 C1orf210Q8IVY1 113 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 MAML2Q8IZL2 1156 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-206ENST00000535290 COL26A1Q96A83 441 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 TBC1D17Q9HA65 648 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 RTEL1Q9NZ71 1219 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 DLGAP2Q9P1A6 1054 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 NCDNQ9UBB6 729 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 WNT16Q9UBV4 365 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 PCDHA1Q9Y5I3 950 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 CNOT1A5YKK6 2376 aaKnown RBP9.61□□□□□ -0.87
CLIP1-206ENST00000535290 DHX16O60231 1041 aaKnown RBP9.6□□□□□ -0.87
CLIP1-206ENST00000535290 KINO60870 393 aaKnown RBP9.6□□□□□ -0.87
CLIP1-206ENST00000535290 LAG3P18627 525 aa9.6□□□□□ -0.87
CLIP1-206ENST00000535290 TGM1P22735 817 aa9.6□□□□□ -0.87
CLIP1-206ENST00000535290 IGBP1P78318 339 aa9.6□□□□□ -0.87
CLIP1-206ENST00000535290 NFX1Q12986 1120 aaKnown RBP9.6□□□□□ -0.87
CLIP1-206ENST00000535290 ACAP1Q15027 740 aa9.6□□□□□ -0.87
CLIP1-206ENST00000535290 IER5Q5VY09 327 aa9.6□□□□□ -0.87
CLIP1-206ENST00000535290 XRRA1Q6P2D8 792 aa9.6□□□□□ -0.87
CLIP1-206ENST00000535290 KCNT2Q6UVM3 1135 aa9.6□□□□□ -0.87
CLIP1-206ENST00000535290 TMC5Q6UXY8 1006 aa9.6□□□□□ -0.87
CLIP1-206ENST00000535290 RSAD2Q8WXG1 361 aa9.6□□□□□ -0.87
CLIP1-206ENST00000535290 ACSF2Q96CM8 615 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-206ENST00000535290 INPP4AQ96PE3 977 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-206ENST00000535290 ZKSCAN3Q9BRR0 538 aa9.6□□□□□ -0.87
CLIP1-206ENST00000535290 RTKNQ9BST9 563 aa9.6□□□□□ -0.87
CLIP1-206ENST00000535290 ZBTB40Q9NUA8 1239 aa9.6□□□□□ -0.87
CLIP1-206ENST00000535290 CA14Q9ULX7 337 aa9.6□□□□□ -0.87
CLIP1-206ENST00000535290 TRPV2Q9Y5S1 764 aa9.6□□□□□ -0.87
CLIP1-206ENST00000535290 PRR5-ARHGAP8B1AHC4 643 aa9.59□□□□□ -0.87
CLIP1-206ENST00000535290 C9IYK1 514 aa9.59□□□□□ -0.87
CLIP1-206ENST00000535290 FGAP02671 866 aa9.59□□□□□ -0.87
CLIP1-206ENST00000535290 GLULP15104 373 aa9.59□□□□□ -0.87
CLIP1-206ENST00000535290 EPCAMP16422 314 aa9.59□□□□□ -0.87
CLIP1-206ENST00000535290 RFX1P22670 979 aa9.59□□□□□ -0.87
CLIP1-206ENST00000535290 TCF7P36402 384 aaPredicted RBP9.59□□□□□ -0.87
CLIP1-206ENST00000535290 ARHGAP8P85298 464 aa9.59□□□□□ -0.87
CLIP1-206ENST00000535290 LMNB2Q03252 620 aa9.59□□□□□ -0.87
CLIP1-206ENST00000535290 KRT17Q04695 432 aa9.59□□□□□ -0.87
CLIP1-206ENST00000535290 SMC1AQ14683 1233 aaKnown RBP9.59□□□□□ -0.87
CLIP1-206ENST00000535290 ALX1Q15699 326 aa9.59□□□□□ -0.87
CLIP1-206ENST00000535290 GNPTABQ3T906 1256 aa9.59□□□□□ -0.87
CLIP1-206ENST00000535290 OTOP3Q7RTS5 596 aa9.59□□□□□ -0.87
CLIP1-206ENST00000535290 GPR161Q8N6U8 529 aaKnown RBP9.59□□□□□ -0.87
CLIP1-206ENST00000535290 ADAM2Q99965 735 aa9.59□□□□□ -0.87
CLIP1-206ENST00000535290 AMNQ9BXJ7 453 aa9.59□□□□□ -0.87
CLIP1-206ENST00000535290 CELF4Q9BZC1 486 aaKnown RBP9.59□□□□□ -0.87
CLIP1-206ENST00000535290 SH2B1Q9NRF2 756 aaPredicted RBP9.59□□□□□ -0.87
CLIP1-206ENST00000535290 MAP3K20Q9NYL2 800 aaKnown RBP9.59□□□□□ -0.87
CLIP1-206ENST00000535290 SIT1Q9Y3P8 196 aa9.59□□□□□ -0.87
CLIP1-206ENST00000535290 GSTTP1A0A1W2PQM5 241 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 GCOM1H8Y6P7 765 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-206ENST00000535290 FIBPO43427 364 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 LRRN2O75325 713 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 POLR2MP0CAP2 368 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 INSRRP14616 1297 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 HAND2P61296 217 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 GSE1Q14687 1217 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 PPM1JQ5JR12 505 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 CCDC149Q6ZUS6 474 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 SLC24A5Q71RS6 500 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 DGKHQ86XP1 1220 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 PNMA1Q8ND90 353 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 AUTS2Q8WXX7 1259 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 RNF25Q96BH1 459 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-206ENST00000535290 GPATCH3Q96I76 525 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 ZNF558Q96NG5 402 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 CASD1Q96PB1 797 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 CDHR5Q9HBB8 845 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 ATP6V0A4Q9HBG4 840 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 RGS18Q9NS28 235 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 DZANK1Q9NVP4 752 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 ERAP1Q9NZ08 941 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 SPG21Q9NZD8 308 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 IGSF9Q9P2J2 1179 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 NOC2LQ9Y3T9 749 aaKnown RBP9.58□□□□□ -0.88
CLIP1-206ENST00000535290 CEP295Q9C0D2 2601 aa9.58□□□□□ -0.88
CLIP1-206ENST00000535290 DENND3A2RUS2 1198 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 M0QZ92 97 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 N4BP1O75113 896 aaKnown RBP9.57□□□□□ -0.88
CLIP1-206ENST00000535290 CXCL14O95715 111 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 CA8P35219 290 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 PPM1AP35813 382 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 FAM189BP81408 668 aa9.57□□□□□ -0.88
CLIP1-206ENST00000535290 KRT76Q01546 638 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms