RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 SIX2Q9NPC8 291 aa11.19□□□□□ -0.62
DDB1-204ENST00000535147 GCNT4Q9P109 453 aa11.19□□□□□ -0.62
DDB1-204ENST00000535147 SLC12A6Q9UHW9 1150 aa11.19□□□□□ -0.62
DDB1-204ENST00000535147 PCDHB13Q9Y5F0 798 aa11.19□□□□□ -0.62
DDB1-204ENST00000535147 COL24A1Q17RW2 1714 aa11.19□□□□□ -0.62
DDB1-204ENST00000535147 PLIN4Q96Q06 1357 aa11.19□□□□□ -0.62
DDB1-204ENST00000535147 FLOT1O75955 427 aa11.19□□□□□ -0.62
DDB1-204ENST00000535147 FSBPO95073 299 aa11.19□□□□□ -0.62
DDB1-204ENST00000535147 POLD1P28340 1107 aa11.19□□□□□ -0.62
DDB1-204ENST00000535147 SHMT1P34896 483 aa11.19□□□□□ -0.62
DDB1-204ENST00000535147 EPHA7Q15375 998 aa11.19□□□□□ -0.62
DDB1-204ENST00000535147 SPRED3Q2MJR0 410 aa11.19□□□□□ -0.62
DDB1-204ENST00000535147 PRR5LQ6MZQ0 368 aa11.19□□□□□ -0.62
DDB1-204ENST00000535147 C15orf52Q6ZUT6 534 aaKnown RBP11.19□□□□□ -0.62
DDB1-204ENST00000535147 FRMD5Q7Z6J6 570 aa11.19□□□□□ -0.62
DDB1-204ENST00000535147 LRRC45Q96CN5 670 aa11.19□□□□□ -0.62
DDB1-204ENST00000535147 NOVA2Q9UNW9 492 aaKnown RBP11.19□□□□□ -0.62
DDB1-204ENST00000535147 TRAF3IP3Q9Y228 551 aa11.19□□□□□ -0.62
DDB1-204ENST00000535147 CES2O00748 559 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 SPATA31C1P0DKV0 1188 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 SCNN1DP51172 638 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 SPIRE1Q08AE8 756 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 C10orf76Q5T2E6 689 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 PPP4R3CPQ6ZMV5 832 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 MICALCLQ6ZW33 695 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 SLF2Q8IX21 1173 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 C1orf131Q8NDD1 294 aaKnown RBP11.18□□□□□ -0.62
DDB1-204ENST00000535147 SLC35C1Q96A29 364 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 TRIM51Q9BSJ1 452 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 BZW2Q9Y6E2 419 aaKnown RBP11.18□□□□□ -0.62
DDB1-204ENST00000535147 NHSQ6T4R5 1651 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 CLSTN1O94985 981 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 NR3C1P04150 777 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 ABCB4P21439 1286 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 ATP2B4P23634 1241 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 PRKCIP41743 596 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 GALCP54803 685 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 DHX9Q08211 1270 aaKnown RBP11.18□□□□□ -0.62
DDB1-204ENST00000535147 PRPF4BQ13523 1007 aaKnown RBP11.18□□□□□ -0.62
DDB1-204ENST00000535147 IFI16Q16666 785 aaKnown RBP11.18□□□□□ -0.62
DDB1-204ENST00000535147 GPATCH4Q5T3I0 446 aaKnown RBP11.18□□□□□ -0.62
DDB1-204ENST00000535147 CHADLQ6NUI6 762 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 LRIG3Q6UXM1 1119 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 NT5DC3Q86UY8 548 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 GLYCTKQ8IVS8 523 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 TBC1D16Q8TBP0 767 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 CALR3Q96L12 384 aaKnown RBP11.18□□□□□ -0.62
DDB1-204ENST00000535147 BHMT2Q9H2M3 363 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 DNM3Q9UQ16 869 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 ARFGEF1Q9Y6D6 1849 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 ASTN1O14525 1302 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 PITPNM2Q9BZ72 1349 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 NRAPQ86VF7 1730 aa11.18□□□□□ -0.62
DDB1-204ENST00000535147 GMNCA6NCL1 334 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 GCNT3O95395 438 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 FGGP02679 453 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 MAGOHP61326 146 aaKnown RBP11.17□□□□□ -0.62
DDB1-204ENST00000535147 ARHGAP4P98171 946 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 EPM2AIP1Q7L775 607 aaPredicted RBP11.17□□□□□ -0.62
DDB1-204ENST00000535147 TMC3Q7Z5M5 1100 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 SPATS2Q86XZ4 545 aaKnown RBP11.17□□□□□ -0.62
DDB1-204ENST00000535147 CCDC13Q8IYE1 715 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 ARFGAP2Q8N6H7 521 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 LNX1Q8TBB1 728 aaPredicted RBP11.17□□□□□ -0.62
DDB1-204ENST00000535147 MAGOHBQ96A72 148 aaKnown RBP11.17□□□□□ -0.62
DDB1-204ENST00000535147 CABS1Q96KC9 395 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 CEP89Q96ST8 783 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 PAGR1Q9BTK6 254 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 RUSC1Q9BVN2 902 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 DDX20Q9UHI6 824 aaKnown RBP11.17□□□□□ -0.62
DDB1-204ENST00000535147 STXBP5LQ9Y2K9 1186 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 ATXN2Q99700 1313 aaKnown RBP11.17□□□□□ -0.62
DDB1-204ENST00000535147 MEIS2O14770 477 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 BUB1BO60566 1050 aaPredicted RBP11.17□□□□□ -0.62
DDB1-204ENST00000535147 SF3A3Q12874 501 aaKnown RBP eCLIP11.17□□□□□ -0.626e-6■□□□□ 10.9
DDB1-204ENST00000535147 KRT71Q3SY84 523 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 TRAPPC3LQ5T215 181 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 C6orf89Q6UWU4 347 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 SLFN11Q7Z7L1 901 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 KSR1Q8IVT5 923 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 CERS5Q8N5B7 392 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 SYT2Q8N9I0 419 aaPredicted RBP11.17□□□□□ -0.62
DDB1-204ENST00000535147 CYP2W1Q8TAV3 490 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 ETNPPLQ8TBG4 499 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.17□□□□□ -0.62
DDB1-204ENST00000535147 USP40Q9NVE5 1235 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 SWAP70Q9UH65 585 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 PPP1R9AQ9ULJ8 1098 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 NENFQ9UMX5 172 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 ATP8A1Q9Y2Q0 1164 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 IGSF9BQ9UPX0 1349 aa11.17□□□□□ -0.62
DDB1-204ENST00000535147 BHMG1C9JSJ3 638 aaPredicted RBP11.16□□□□□ -0.62
DDB1-204ENST00000535147 FAM86B1E9PN63 330 aa11.16□□□□□ -0.62
DDB1-204ENST00000535147 PDXKO00764 312 aa11.16□□□□□ -0.62
DDB1-204ENST00000535147 TRAPPC3O43617 180 aa11.16□□□□□ -0.62
DDB1-204ENST00000535147 EVI5O60447 810 aa11.16□□□□□ -0.62
DDB1-204ENST00000535147 FAM86B2P0C5J1 330 aa11.16□□□□□ -0.62
DDB1-204ENST00000535147 JAM2P57087 298 aa11.16□□□□□ -0.62
DDB1-204ENST00000535147 NFIAQ12857 509 aa11.16□□□□□ -0.62
DDB1-204ENST00000535147 USH1GQ495M9 461 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms