RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 CCDC178Q5BJE1 867 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 IFIT1BQ5T764 474 aaKnown RBP6.57□□□□□ -1.36
CHKA-208ENST00000533910 ZNF746Q6NUN9 644 aaPredicted RBP6.57□□□□□ -1.36
CHKA-208ENST00000533910 LRFN4Q6PJG9 635 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 SYNE3Q6ZMZ3 975 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 NBPF11Q86T75 865 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 DGKHQ86XP1 1220 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 RAB11FIP4Q86YS3 637 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 DMRTC2Q8IXT2 367 aaPredicted RBP6.57□□□□□ -1.36
CHKA-208ENST00000533910 STK11IPQ8N1F8 1099 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 SLC44A5Q8NCS7 719 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 FBXO18Q8NFZ0 1043 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 DYNLL2Q96FJ2 89 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 PLPPR2Q96GM1 343 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 SRPK1Q96SB4 655 aaKnown RBP6.57□□□□□ -1.36
CHKA-208ENST00000533910 MAP3K14Q99558 947 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 NRSN2Q9GZP1 204 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 TAOK3Q9H2K8 898 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 ZSCAN16Q9H4T2 348 aaPredicted RBP6.57□□□□□ -1.36
CHKA-208ENST00000533910 ZNF277Q9NRM2 450 aaPredicted RBP6.57□□□□□ -1.36
CHKA-208ENST00000533910 IL17RBQ9NRM6 502 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 USP40Q9NVE5 1235 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 KCNK4Q9NYG8 393 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 ORC3Q9UBD5 711 aaPredicted RBP6.57□□□□□ -1.36
CHKA-208ENST00000533910 SAP30BPQ9UHR5 308 aaKnown RBP6.57□□□□□ -1.36
CHKA-208ENST00000533910 STRIP2Q9ULQ0 834 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 SBF1O95248 1867 aa6.57□□□□□ -1.36
CHKA-208ENST00000533910 IGKV6D-41A0A0C4DH26 115 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 TSPY2A6NKD2 308 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 DCDC2CA8MYV0 355 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 H3BQV1 296 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 PSMD14O00487 310 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 TM4SF5O14894 197 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 TPD52L2O43399 206 aaKnown RBP6.56□□□□□ -1.36
CHKA-208ENST00000533910 NMT2O60551 498 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 LILRB5O75023 590 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 MBD3O95983 291 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 KRT85P78386 507 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 TFAP4Q01664 338 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 RPL6Q02878 288 aaKnown RBP6.56□□□□□ -1.36
CHKA-208ENST00000533910 NFIAQ12857 509 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 FAM47AQ5JRC9 791 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 WIPI1Q5MNZ9 446 aaPredicted RBP6.56□□□□□ -1.36
CHKA-208ENST00000533910 SDE2Q6IQ49 451 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 TMTC3Q6ZXV5 915 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 CATIPQ7Z7H3 387 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 TTC6Q86TZ1 520 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 FERMT3Q86UX7 667 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 CD163Q86VB7 1156 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 LSRQ86X29 649 aaPredicted RBP6.56□□□□□ -1.36
CHKA-208ENST00000533910 NIM1KQ8IY84 436 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 FANCBQ8NB91 859 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 MRFAP1L1Q96HT8 127 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 C8orf76Q96K31 380 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 RNF26Q9BY78 433 aaPredicted RBP6.56□□□□□ -1.36
CHKA-208ENST00000533910 KANSL2Q9H9L4 492 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 RBM28Q9NW13 759 aaKnown RBP6.56□□□□□ -1.36
CHKA-208ENST00000533910 SWAP70Q9UH65 585 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 SERPINB13Q9UIV8 391 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 ZNRF3Q9ULT6 936 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 CNPY2Q9Y2B0 182 aa6.56□□□□□ -1.36
CHKA-208ENST00000533910 TMA7Q9Y2S6 64 aaKnown RBP6.56□□□□□ -1.36
CHKA-208ENST00000533910 R3HCC1Q9Y3T6 440 aaKnown RBP6.56□□□□□ -1.36
CHKA-208ENST00000533910 ATAD5Q96QE3 1844 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 FAM86C2PA6NEL3 165 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 GFRA2O00451 464 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 ADAM11O75078 769 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 ENTPD3O75355 529 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 DEXIO95424 95 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 HLA-DOAP06340 250 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 TSPY3P0CV98 308 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 TSPY8P0CW00 308 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 SHMT1P34896 483 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 MMP14P50281 582 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 AP3B2Q13367 1082 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 PICALMQ13492 652 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 GRM4Q14833 912 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 TCEAL1Q15170 157 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 PPP2R5EQ16537 467 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 SLC4A8Q2Y0W8 1093 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 CFAP100Q494V2 611 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 ATL3Q6DD88 541 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 BRAPQ7Z569 592 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 C12orf40Q86WS4 652 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 WFDC8Q8IUA0 241 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 CCDC144CPQ8IYA2 1237 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 CRACR2BQ8N4Y2 399 aaPredicted RBP6.55□□□□□ -1.36
CHKA-208ENST00000533910 AGBL3Q8NEM8 1001 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 GPT2Q8TD30 523 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 WASF1Q92558 559 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 PHKBQ93100 1093 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 ZBED3Q96IU2 234 aaPredicted RBP6.55□□□□□ -1.36
CHKA-208ENST00000533910 CORO1BQ9BR76 489 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 ALG1Q9BT22 464 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 DHX36Q9H2U1 1008 aaKnown RBP6.55□□□□□ -1.36
CHKA-208ENST00000533910 DNAJC18Q9H819 358 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 MKNK2Q9HBH9 465 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 CACNA2D2Q9NY47 1150 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 SNTG2Q9NY99 539 aa6.55□□□□□ -1.36
CHKA-208ENST00000533910 PCDHAC2Q9Y5I4 1007 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms