RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 NXPE3Q969Y0 559 aa12.33□□□□□ -0.44
CSDE1-215ENST00000533818 ZNF558Q96NG5 402 aa12.33□□□□□ -0.44
CSDE1-215ENST00000533818 BCAS3Q9H6U6 928 aa12.33□□□□□ -0.44
CSDE1-215ENST00000533818 SPG21Q9NZD8 308 aa12.33□□□□□ -0.44
CSDE1-215ENST00000533818 IPO8O15397 1037 aaKnown RBP12.32□□□□□ -0.44
CSDE1-215ENST00000533818 N4BP1O75113 896 aaKnown RBP12.32□□□□□ -0.44
CSDE1-215ENST00000533818 HSPD1P10809 573 aaKnown RBP12.32□□□□□ -0.44
CSDE1-215ENST00000533818 TRIM27P14373 513 aa12.32□□□□□ -0.44
CSDE1-215ENST00000533818 PBX3P40426 434 aa12.32□□□□□ -0.44
CSDE1-215ENST00000533818 SOWAHCQ53LP3 525 aaPredicted RBP12.32□□□□□ -0.44
CSDE1-215ENST00000533818 IER5Q5VY09 327 aa12.32□□□□□ -0.44
CSDE1-215ENST00000533818 TSSK4Q6SA08 328 aa12.32□□□□□ -0.44
CSDE1-215ENST00000533818 CLASRPQ8N2M8 674 aaKnown RBP12.32□□□□□ -0.44
CSDE1-215ENST00000533818 CLUAP1Q96AJ1 413 aa12.32□□□□□ -0.44
CSDE1-215ENST00000533818 KIF12Q96FN5 646 aa12.32□□□□□ -0.44
CSDE1-215ENST00000533818 TMX1Q9H3N1 280 aa12.32□□□□□ -0.44
CSDE1-215ENST00000533818 SFXN1Q9H9B4 322 aa12.32□□□□□ -0.44
CSDE1-215ENST00000533818 IGSF5Q9NSI5 407 aa12.32□□□□□ -0.44
CSDE1-215ENST00000533818 TUBE1Q9UJT0 475 aa12.32□□□□□ -0.44
CSDE1-215ENST00000533818 TNNQ9UQP3 1299 aa12.32□□□□□ -0.44
CSDE1-215ENST00000533818 KIAA1217Q5T5P2 1943 aa12.32□□□□□ -0.44
CSDE1-215ENST00000533818 KANSL1LA0AUZ9 987 aa12.31□□□□□ -0.44
CSDE1-215ENST00000533818 FOXD2O60548 495 aaPredicted RBP12.31□□□□□ -0.44
CSDE1-215ENST00000533818 FGFR1P11362 822 aa12.31□□□□□ -0.44
CSDE1-215ENST00000533818 ATP5JP18859 108 aa12.31□□□□□ -0.44
CSDE1-215ENST00000533818 GNAT2P19087 354 aa12.31□□□□□ -0.44
CSDE1-215ENST00000533818 CELF5Q8N6W0 485 aaKnown RBP12.31□□□□□ -0.44
CSDE1-215ENST00000533818 RHPN1Q8TCX5 695 aa12.31□□□□□ -0.44
CSDE1-215ENST00000533818 SLC22A17Q8WUG5 538 aa12.31□□□□□ -0.44
CSDE1-215ENST00000533818 GPKOWQ92917 476 aaPredicted RBP eCLIP12.31□□□□□ -0.44
CSDE1-215ENST00000533818 FAM126AQ9BYI3 521 aaPredicted RBP12.31□□□□□ -0.44
CSDE1-215ENST00000533818 ITPR1Q14643 2758 aa12.31□□□□□ -0.44
CSDE1-215ENST00000533818 ABCB11O95342 1321 aa12.31□□□□□ -0.44
CSDE1-215ENST00000533818 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.3□□□□□ -0.44
CSDE1-215ENST00000533818 FAM170BA6NMN3 283 aa12.3□□□□□ -0.44
CSDE1-215ENST00000533818 PATL2C9JE40 543 aaKnown RBP12.3□□□□□ -0.44
CSDE1-215ENST00000533818 M0QZ92 97 aa12.3□□□□□ -0.44
CSDE1-215ENST00000533818 TM4SF5O14894 197 aa12.3□□□□□ -0.44
CSDE1-215ENST00000533818 RBM25P49756 843 aaKnown RBP12.3□□□□□ -0.44
CSDE1-215ENST00000533818 NFX1Q12986 1120 aaKnown RBP12.3□□□□□ -0.44
CSDE1-215ENST00000533818 PPFIA1Q13136 1202 aa12.3□□□□□ -0.44
CSDE1-215ENST00000533818 UBXN2BQ14CS0 331 aa12.3□□□□□ -0.44
CSDE1-215ENST00000533818 LRRC55Q6ZSA7 311 aa12.3□□□□□ -0.44
CSDE1-215ENST00000533818 VSIG10LQ86VR7 867 aa12.3□□□□□ -0.44
CSDE1-215ENST00000533818 IFNL3Q8IZI9 196 aa12.3□□□□□ -0.44
CSDE1-215ENST00000533818 FAM9BQ8IZU0 186 aa12.3□□□□□ -0.44
CSDE1-215ENST00000533818 MAP4K1Q92918 833 aa12.3□□□□□ -0.44
CSDE1-215ENST00000533818 OSBP2Q969R2 916 aa12.3□□□□□ -0.44
CSDE1-215ENST00000533818 ZFP91Q96JP5 570 aaPredicted RBP12.3□□□□□ -0.44
CSDE1-215ENST00000533818 PDCD2LQ9BRP1 358 aa12.3□□□□□ -0.44
CSDE1-215ENST00000533818 MYL10Q9BUA6 226 aa12.3□□□□□ -0.44
CSDE1-215ENST00000533818 FAM49AQ9H0Q0 323 aaPredicted RBP12.3□□□□□ -0.44
CSDE1-215ENST00000533818 ATP6V0A4Q9HBG4 840 aa12.3□□□□□ -0.44
CSDE1-215ENST00000533818 SLC2A4RGQ9NR83 387 aa12.3□□□□□ -0.44
CSDE1-215ENST00000533818 EPS15L1Q9UBC2 864 aa12.3□□□□□ -0.44
CSDE1-215ENST00000533818 MTF2Q9Y483 593 aaPredicted RBP12.3□□□□□ -0.44
CSDE1-215ENST00000533818 DENND3A2RUS2 1198 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 CYSRT1A8MQ03 144 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 GPAA1O43292 621 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 RPLP2P05387 115 aaKnown RBP12.29□□□□□ -0.44
CSDE1-215ENST00000533818 PDHBP11177 359 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 TOP1P11387 765 aaKnown RBP12.29□□□□□ -0.44
CSDE1-215ENST00000533818 NCLP19338 710 aaKnown RBP12.29□□□□□ -0.44
CSDE1-215ENST00000533818 MAGEA9P43362 315 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 NOVP48745 357 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 PPARAQ07869 468 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 ZNF543Q08ER8 600 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 TMEM62Q0P6H9 643 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 SNW1Q13573 536 aaKnown RBP12.29□□□□□ -0.44
CSDE1-215ENST00000533818 GRIK4Q16099 956 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 TMEM266Q2M3C6 531 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 HSP90AB4PQ58FF6 505 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 C15orf39Q6ZRI6 1047 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 PRR23BQ6ZRT6 265 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 SLC24A5Q71RS6 500 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 CYFIP1Q7L576 1253 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 AUTS2Q8WXX7 1259 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 ADAM2Q99965 735 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 OSBPL6Q9BZF3 934 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 NACAP1Q9BZK3 213 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 C1orf112Q9NSG2 853 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 ANKFY1Q9P2R3 1169 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 TRPV2Q9Y5S1 764 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 IGSF9BQ9UPX0 1349 aa12.29□□□□□ -0.44
CSDE1-215ENST00000533818 MBLAC1A4D2B0 266 aaPredicted RBP12.28□□□□□ -0.44
CSDE1-215ENST00000533818 MGEA5O60502 916 aa12.28□□□□□ -0.44
CSDE1-215ENST00000533818 RANBP6O60518 1105 aaKnown RBP12.28□□□□□ -0.44
CSDE1-215ENST00000533818 KCNK5O95279 499 aa12.28□□□□□ -0.44
CSDE1-215ENST00000533818 CFBP00751 764 aa12.28□□□□□ -0.44
CSDE1-215ENST00000533818 LIMK1P53667 647 aa12.28□□□□□ -0.44
CSDE1-215ENST00000533818 MARCH8Q5T0T0 291 aa12.28□□□□□ -0.44
CSDE1-215ENST00000533818 METTL7BQ6UX53 244 aa12.28□□□□□ -0.44
CSDE1-215ENST00000533818 VPS52Q8N1B4 723 aa12.28□□□□□ -0.44
CSDE1-215ENST00000533818 TMEM57Q8N5G2 664 aa12.28□□□□□ -0.44
CSDE1-215ENST00000533818 ZCCHC14Q8WYQ9 949 aaKnown RBP12.28□□□□□ -0.44
CSDE1-215ENST00000533818 STAMQ92783 540 aa12.28□□□□□ -0.44
CSDE1-215ENST00000533818 FRAT1Q92837 279 aaPredicted RBP12.28□□□□□ -0.44
CSDE1-215ENST00000533818 MYADMQ96S97 322 aa12.28□□□□□ -0.44
CSDE1-215ENST00000533818 TMEM47Q9BQJ4 181 aa12.28□□□□□ -0.44
CSDE1-215ENST00000533818 TMEM121BQ9BXQ6 578 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms