RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 NFX1Q12986 1120 aaKnown RBP11.79□□□□□ -0.52
CAPN1-225ENST00000533704 NPY5RQ15761 445 aa11.79□□□□□ -0.52
CAPN1-225ENST00000533704 TMEM266Q2M3C6 531 aa11.79□□□□□ -0.52
CAPN1-225ENST00000533704 MIER3Q7Z3K6 550 aa11.79□□□□□ -0.52
CAPN1-225ENST00000533704 POTEDQ86YR6 584 aa11.79□□□□□ -0.52
CAPN1-225ENST00000533704 NME8Q8N427 588 aa11.79□□□□□ -0.52
CAPN1-225ENST00000533704 DAGLBQ8NCG7 672 aa11.79□□□□□ -0.52
CAPN1-225ENST00000533704 IL27Q8NEV9 243 aa11.79□□□□□ -0.52
CAPN1-225ENST00000533704 BBXQ8WY36 941 aaPredicted RBP11.79□□□□□ -0.52
CAPN1-225ENST00000533704 SLC5A5Q92911 643 aa11.79□□□□□ -0.52
CAPN1-225ENST00000533704 UNC45AQ9H3U1 944 aa11.79□□□□□ -0.52
CAPN1-225ENST00000533704 SUGCTQ9HAC7 445 aa11.79□□□□□ -0.52
CAPN1-225ENST00000533704 DDX25Q9UHL0 483 aaKnown RBP11.79□□□□□ -0.52
CAPN1-225ENST00000533704 PADI3Q9ULW8 664 aa11.79□□□□□ -0.52
CAPN1-225ENST00000533704 MAFBQ9Y5Q3 323 aaPredicted RBP11.79□□□□□ -0.52
CAPN1-225ENST00000533704 A0A0C4DFX4 3053 aa11.79□□□□□ -0.52
CAPN1-225ENST00000533704 ZBTB42B2RXF5 422 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 M0R2N6 131 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 ENPP3O14638 875 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 MARCH6O60337 910 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 LPXNO60711 386 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 CTDNEP1O95476 244 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 C22orf31O95567 290 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 VTNP04004 478 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 OATP04181 439 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 JAK3P52333 1124 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 PRKCEQ02156 737 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 UGCGQ16739 394 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 ME3Q16798 604 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 Q4G0T1 1027 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 TJAP1Q5JTD0 557 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 PIK3AP1Q6ZUJ8 805 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 KIAA0319LQ8IZA0 1049 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 FIBCD1Q8N539 461 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 SP7Q8TDD2 431 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-225ENST00000533704 OXER1Q8TDS5 423 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 WASF1Q92558 559 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 IL17RAQ96F46 866 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 FAM167AQ96KS9 214 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 RIT2Q99578 217 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 PHF20Q9BVI0 1012 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 CEP131Q9UPN4 1083 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 IGSF9BQ9UPX0 1349 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 ATG2AQ2TAZ0 1938 aa11.78□□□□□ -0.52
CAPN1-225ENST00000533704 FNDC1Q4ZHG4 1894 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-225ENST00000533704 CYP3A7-CYP3A51PA0A087WV96 503 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 SLC37A4O43826 429 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 ZNF862O60290 1169 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 RPS6KA5O75582 802 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 PSMD10O75832 226 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 POU3F3P20264 500 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-225ENST00000533704 CYP3A7P24462 503 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 SFNP31947 248 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 CTNNB1P35222 781 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 CLCN3P51790 818 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 MRPS5P82675 430 aaKnown RBP11.77□□□□□ -0.53
CAPN1-225ENST00000533704 TFF2Q03403 129 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 KIZQ2M2Z5 673 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 EPC2Q52LR7 807 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 FAM177A1Q8N128 213 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-225ENST00000533704 LRRC71Q8N4P6 559 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 LINC01599Q8WXQ3 324 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 SYMPKQ92797 1274 aaKnown RBP11.77□□□□□ -0.53
CAPN1-225ENST00000533704 GTF3C6Q969F1 213 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 ZNF668Q96K58 619 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-225ENST00000533704 OSMRQ99650 979 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 FTHL17Q9BXU8 183 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 CDHR5Q9HBB8 845 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 NRBP2Q9NSY0 501 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 SEPT9Q9UHD8 586 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-225ENST00000533704 LRFN2Q9ULH4 789 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 AKT3Q9Y243 479 aa11.77□□□□□ -0.53
CAPN1-225ENST00000533704 NOC2LQ9Y3T9 749 aaKnown RBP11.77□□□□□ -0.53
CAPN1-225ENST00000533704 FAM205CA6NFA0 338 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 MAGEB2O15479 319 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 CCNT1O60563 726 aaKnown RBP11.76□□□□□ -0.53
CAPN1-225ENST00000533704 JAK2O60674 1132 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 CSPG5O95196 566 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 KRT2P35908 639 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 GPM6BQ13491 265 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 TRIM29Q14134 588 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 BTG3Q14201 252 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-225ENST00000533704 MTERF2Q49AM1 385 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 PAN2Q504Q3 1202 aaKnown RBP11.76□□□□□ -0.53
CAPN1-225ENST00000533704 EFCAB12Q6NXP0 572 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 NEK8Q86SG6 692 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 RTN4RL1Q86UN2 441 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-225ENST00000533704 TMEM192Q8IY95 271 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 BANK1Q8NDB2 785 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 ETNPPLQ8TBG4 499 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 ATXN2LQ8WWM7 1075 aaKnown RBP11.76□□□□□ -0.53
CAPN1-225ENST00000533704 SCLT1Q96NL6 688 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 SAMD11Q96NU1 681 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 ASB2Q96Q27 587 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 MAP7D2Q96T17 732 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 BRMS1Q9HCU9 246 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 SQORQ9Y6N5 450 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 ADGRA3Q8IWK6 1321 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 KDM3AQ9Y4C1 1321 aa11.76□□□□□ -0.53
CAPN1-225ENST00000533704 ARID2Q68CP9 1835 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms