RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 JAKMIP2Q96AA8 810 aa31.29■■■□□ 2.6
SAMD1-202ENST00000533683 NAPGQ99747 312 aaPredicted RBP31.29■■■□□ 2.6
SAMD1-202ENST00000533683 SLC16A3O15427 465 aaKnown RBP31.29■■■□□ 2.6
SAMD1-202ENST00000533683 EIF4A3P38919 411 aaKnown RBP31.29■■■□□ 2.6
SAMD1-202ENST00000533683 APBA1Q02410 837 aa31.29■■■□□ 2.6
SAMD1-202ENST00000533683 KSR1Q8IVT5 923 aa31.29■■■□□ 2.6
SAMD1-202ENST00000533683 TMOD4Q9NZQ9 345 aa31.29■■■□□ 2.6
SAMD1-202ENST00000533683 TESPA1A2RU30 521 aaPredicted RBP31.28■■■□□ 2.6
SAMD1-202ENST00000533683 GPIHBP1Q8IV16 184 aa31.28■■■□□ 2.6
SAMD1-202ENST00000533683 CDC23Q9UJX2 597 aa31.28■■■□□ 2.6
SAMD1-202ENST00000533683 DBR1Q9UK59 544 aaKnown RBP31.28■■■□□ 2.6
SAMD1-202ENST00000533683 SBF1O95248 1867 aa31.28■■■□□ 2.6
SAMD1-202ENST00000533683 USP2O75604 605 aaPredicted RBP31.27■■■□□ 2.6
SAMD1-202ENST00000533683 POLR2FP61218 127 aaKnown RBP31.27■■■□□ 2.6
SAMD1-202ENST00000533683 VSIG10LQ86VR7 867 aa31.27■■■□□ 2.6
SAMD1-202ENST00000533683 UPF1Q92900 1129 aaKnown RBP eCLIP31.27■■■□□ 2.6
SAMD1-202ENST00000533683 METTL14Q9HCE5 456 aaKnown RBP31.27■■■□□ 2.6
SAMD1-202ENST00000533683 KRT86O43790 486 aa31.27■■■□□ 2.6
SAMD1-202ENST00000533683 LYPLA2O95372 231 aa31.27■■■□□ 2.6
SAMD1-202ENST00000533683 AFPP02771 609 aaKnown RBP31.27■■■□□ 2.6
SAMD1-202ENST00000533683 EPB41P11171 864 aaKnown RBP31.27■■■□□ 2.6
SAMD1-202ENST00000533683 XRCC5P13010 732 aaKnown RBP31.27■■■□□ 2.6
SAMD1-202ENST00000533683 KIF11P52732 1056 aa31.27■■■□□ 2.6
SAMD1-202ENST00000533683 SPA17Q15506 151 aa31.27■■■□□ 2.6
SAMD1-202ENST00000533683 XRRA1Q6P2D8 792 aa31.27■■■□□ 2.6
SAMD1-202ENST00000533683 UBE4BO95155 1302 aa31.27■■■□□ 2.6
SAMD1-202ENST00000533683 NFIL3Q16649 462 aa31.26■■■□□ 2.6
SAMD1-202ENST00000533683 ATP2A1O14983 1001 aa31.26■■■□□ 2.59
SAMD1-202ENST00000533683 DDNO94850 711 aaPredicted RBP31.26■■■□□ 2.59
SAMD1-202ENST00000533683 CCNE2O96020 404 aa31.26■■■□□ 2.59
SAMD1-202ENST00000533683 NR3C2P08235 984 aa31.26■■■□□ 2.59
SAMD1-202ENST00000533683 RARRES1P49788 294 aa31.26■■■□□ 2.59
SAMD1-202ENST00000533683 VAV2P52735 878 aa31.26■■■□□ 2.59
SAMD1-202ENST00000533683 HGSNATQ68CP4 663 aa31.26■■■□□ 2.59
SAMD1-202ENST00000533683 FBXO38Q6PIJ6 1188 aa31.26■■■□□ 2.59
SAMD1-202ENST00000533683 DLK2Q6UY11 383 aa31.26■■■□□ 2.59
SAMD1-202ENST00000533683 STXBP4Q6ZWJ1 553 aa31.26■■■□□ 2.59
SAMD1-202ENST00000533683 NUCKS1Q9H1E3 243 aaKnown RBP31.26■■■□□ 2.59
SAMD1-202ENST00000533683 LCA5LO95447 670 aa31.25■■■□□ 2.59
SAMD1-202ENST00000533683 CCND2P30279 289 aa31.25■■■□□ 2.59
SAMD1-202ENST00000533683 TUBB2AQ13885 445 aa31.25■■■□□ 2.59
SAMD1-202ENST00000533683 UGCGQ16739 394 aa31.25■■■□□ 2.59
SAMD1-202ENST00000533683 SYN2Q92777 582 aaPredicted RBP31.25■■■□□ 2.59
SAMD1-202ENST00000533683 TUBB2BQ9BVA1 445 aa31.25■■■□□ 2.59
SAMD1-202ENST00000533683 STRA6Q9BX79 667 aa31.25■■■□□ 2.59
SAMD1-202ENST00000533683 TEX13BQ9BXU2 312 aa31.25■■■□□ 2.59
SAMD1-202ENST00000533683 GANQ9H2C0 597 aa31.25■■■□□ 2.59
SAMD1-202ENST00000533683 DEF6Q9H4E7 631 aa31.25■■■□□ 2.59
SAMD1-202ENST00000533683 PCDHB13Q9Y5F0 798 aa31.25■■■□□ 2.59
SAMD1-202ENST00000533683 DCAF17Q5H9S7 520 aaPredicted RBP31.24■■■□□ 2.59
SAMD1-202ENST00000533683 MAEAQ7L5Y9 396 aa31.24■■■□□ 2.59
SAMD1-202ENST00000533683 BORCS6Q96GS4 357 aa31.24■■■□□ 2.59
SAMD1-202ENST00000533683 ARID3AQ99856 593 aa31.24■■■□□ 2.59
SAMD1-202ENST00000533683 TLR2O60603 784 aa31.24■■■□□ 2.59
SAMD1-202ENST00000533683 SLC35C1Q96A29 364 aa31.24■■■□□ 2.59
SAMD1-202ENST00000533683 DUSP10Q9Y6W6 482 aa31.24■■■□□ 2.59
SAMD1-202ENST00000533683 SPDYE16A6NNV3 312 aaPredicted RBP31.23■■■□□ 2.59
SAMD1-202ENST00000533683 AKR1B10O60218 316 aa31.23■■■□□ 2.59
SAMD1-202ENST00000533683 PPP1R37O75864 691 aa31.23■■■□□ 2.59
SAMD1-202ENST00000533683 YWHABP31946 246 aaKnown RBP31.23■■■□□ 2.59
SAMD1-202ENST00000533683 ASTE1Q2TB18 679 aaPredicted RBP31.23■■■□□ 2.59
SAMD1-202ENST00000533683 SFMBT2Q5VUG0 894 aa31.23■■■□□ 2.59
SAMD1-202ENST00000533683 DPY19L2P1Q6NXN4 242 aa31.23■■■□□ 2.59
SAMD1-202ENST00000533683 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.23■■■□□ 2.59
SAMD1-202ENST00000533683 HOXC10Q9NYD6 342 aa31.23■■■□□ 2.59
SAMD1-202ENST00000533683 PCDHA13Q9Y5I0 950 aa31.23■■■□□ 2.59
SAMD1-202ENST00000533683 WDR64B1ANS9 1081 aa31.23■■■□□ 2.59
SAMD1-202ENST00000533683 JAK3P52333 1124 aa31.23■■■□□ 2.59
SAMD1-202ENST00000533683 KRT76Q01546 638 aa31.23■■■□□ 2.59
SAMD1-202ENST00000533683 MAPK8IP2Q13387 824 aaPredicted RBP31.23■■■□□ 2.59
SAMD1-202ENST00000533683 RSRC2Q7L4I2 434 aaKnown RBP31.23■■■□□ 2.59
SAMD1-202ENST00000533683 C4orf19Q8IY42 314 aa31.23■■■□□ 2.59
SAMD1-202ENST00000533683 NSUN6Q8TEA1 469 aaKnown RBP31.23■■■□□ 2.59
SAMD1-202ENST00000533683 IFIH1Q9BYX4 1025 aaKnown RBP31.23■■■□□ 2.59
SAMD1-202ENST00000533683 SNCAIPQ9Y6H5 919 aa31.23■■■□□ 2.59
SAMD1-202ENST00000533683 SFNP31947 248 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 KIF5AQ12840 1032 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 SH3D19Q5HYK7 790 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 TCERG1LQ5VWI1 586 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 HS2ST1Q7LGA3 356 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 GPRASP2Q96D09 838 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 GBP3Q9H0R5 595 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 CYP39A1Q9NYL5 469 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 SSU72P8A0A1W2PR75 194 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 TMEM150BA6NC51 233 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 SLC9A1P19634 815 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 VGLL4Q14135 290 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 EHBP1Q8NDI1 1231 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 INPP4AQ96PE3 977 aaPredicted RBP31.22■■■□□ 2.59
SAMD1-202ENST00000533683 SH2D3AQ9BRG2 576 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 ACAD9Q9H845 621 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 PLCB1Q9NQ66 1216 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 A1CFQ9NQ94 594 aaKnown RBP31.22■■■□□ 2.59
SAMD1-202ENST00000533683 AGPAT3Q9NRZ7 376 aa31.22■■■□□ 2.59
SAMD1-202ENST00000533683 ACTN1P12814 892 aa31.21■■■□□ 2.59
SAMD1-202ENST00000533683 H2AFXP16104 143 aaPredicted RBP31.21■■■□□ 2.59
SAMD1-202ENST00000533683 PSMC2P35998 433 aaKnown RBP31.21■■■□□ 2.59
SAMD1-202ENST00000533683 PSMC5P62195 406 aa31.21■■■□□ 2.59
SAMD1-202ENST00000533683 AMPD2Q01433 879 aa31.21■■■□□ 2.59
SAMD1-202ENST00000533683 FAM186BQ8IYM0 893 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms