RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 STRIP2Q9ULQ0 834 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 NFU1Q9UMS0 254 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 PLAAQ9Y263 795 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 ROBO2Q9HCK4 1378 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 LAMC1P11047 1609 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 FAM187AA6NFU0 413 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 GGPS1O95749 300 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 SLC16A2P36021 539 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 GPC5P78333 572 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 KLHL38Q2WGJ6 581 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 OR6B2Q6IFH4 312 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 ZNF449Q6P9G9 518 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 RSBN1LQ6PCB5 846 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-236ENST00000533667 ERICH1Q86X53 443 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 RAD54LQ92698 747 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 TRIM55Q9BYV6 548 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 UPF3AQ9H1J1 476 aaKnown RBP7.52□□□□□ -1.21
CTNND1-236ENST00000533667 NOC2LQ9Y3T9 749 aaKnown RBP7.52□□□□□ -1.21
CTNND1-236ENST00000533667 CDC42BPGQ6DT37 1551 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 MEIS1O00470 390 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 KRT38O76015 456 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 CHEK2O96017 543 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 CALB1P05937 261 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 PLS3P13797 630 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 PPARGP37231 505 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-236ENST00000533667 MCAMP43121 646 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 ART3Q13508 389 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 E2F4Q16254 413 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 CRLF3Q8IUI8 442 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 WDR75Q8IWA0 830 aaKnown RBP7.52□□□□□ -1.21
CTNND1-236ENST00000533667 MB21D2Q8IYB1 491 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-236ENST00000533667 SPICE1Q8N0Z3 855 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 SIX6OS1Q8N1H7 587 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 TTC39CQ8N584 583 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 GIMAP8Q8ND71 665 aaPredicted RBP7.52□□□□□ -1.21
CTNND1-236ENST00000533667 NRBF2Q96F24 287 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 AP5M1Q9H0R1 490 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 RPF1Q9H9Y2 349 aaKnown RBP7.52□□□□□ -1.21
CTNND1-236ENST00000533667 TMEM51Q9NW97 253 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 DNAJC12Q9UKB3 198 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 PFASO15067 1338 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 PLA2R1Q13018 1463 aa7.52□□□□□ -1.21
CTNND1-236ENST00000533667 TARSL2A2RTX5 802 aaKnown RBP7.51□□□□□ -1.21
CTNND1-236ENST00000533667 ZBTB5O15062 677 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 CHUKO15111 745 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 ANXA13P27216 316 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 IGBP1P78318 339 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 PHEXP78562 749 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 BBS9Q3SYG4 887 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 FAM133BQ5BKY9 247 aaKnown RBP7.51□□□□□ -1.21
CTNND1-236ENST00000533667 NBPF10Q6P3W6 841 aaKnown RBP7.51□□□□□ -1.21
CTNND1-236ENST00000533667 PI16Q6UXB8 463 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 TAB3Q8N5C8 712 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-236ENST00000533667 TMEM35BQ8NCS4 154 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 DEPDC1BQ8WUY9 529 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 ATP6V1E2Q96A05 226 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 VPS39Q96JC1 886 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 PGBD1Q96JS3 809 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 EIF2AQ9BY44 585 aaKnown RBP7.51□□□□□ -1.21
CTNND1-236ENST00000533667 BHMT2Q9H2M3 363 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 SLITRK6Q9H5Y7 841 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 SMYD2Q9NRG4 433 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 UTP6Q9NYH9 597 aaKnown RBP7.51□□□□□ -1.21
CTNND1-236ENST00000533667 CPSF3Q9UKF6 684 aaKnown RBP7.51□□□□□ -1.21
CTNND1-236ENST00000533667 ADAM21Q9UKJ8 722 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 K7ERI5 159 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 TOM1L1O75674 476 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 PALMO75781 387 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 ABL1P00519 1130 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 MYBL1P10243 752 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 PYGBP11216 843 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 CDC25AP30304 524 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 CHRNA3P32297 505 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 DPP9Q86TI2 863 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 GUF1Q8N442 669 aaKnown RBP7.51□□□□□ -1.21
CTNND1-236ENST00000533667 XXYLT1Q8NBI6 393 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 AP1M1Q9BXS5 423 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 PITPNM3Q9BZ71 974 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 SLC24A3Q9HC58 644 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 TBC1D22BQ9NU19 505 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 TRPC5Q9UL62 973 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-236ENST00000533667 TPX2Q9ULW0 747 aaKnown RBP7.51□□□□□ -1.21
CTNND1-236ENST00000533667 SYNJ2BP-COX16A0A087WUM0 186 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 GNGT2O14610 69 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 TPD52L2O43399 206 aaKnown RBP7.51□□□□□ -1.21
CTNND1-236ENST00000533667 SLC26A4O43511 780 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 PLEKHA8P1O95397 391 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 NR3C1P04150 777 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 NPR1P16066 1061 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 TAC1P20366 129 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 SLCO1A2P46721 670 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 TNFAIP2Q03169 654 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 ARHGEF6Q15052 776 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 TAF1BQ53T94 588 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-236ENST00000533667 FSCBQ5H9T9 825 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 NUGGCQ68CJ6 796 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 RNF207Q6ZRF8 634 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 FAM196AQ6ZSG2 479 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 TOGARAM2Q6ZUX3 1019 aa7.51□□□□□ -1.21
CTNND1-236ENST00000533667 ENOSF1Q7L5Y1 443 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms