RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 KRT76Q01546 638 aa17.91■□□□□ 0.46
CHMP4A-207ENST00000533523 CAMK1Q14012 370 aa17.91■□□□□ 0.46
CHMP4A-207ENST00000533523 NAALADL2Q58DX5 795 aa17.91■□□□□ 0.46
CHMP4A-207ENST00000533523 SPOUT1Q5T280 376 aaKnown RBP17.91■□□□□ 0.46
CHMP4A-207ENST00000533523 RTN4RL1Q86UN2 441 aaPredicted RBP17.91■□□□□ 0.46
CHMP4A-207ENST00000533523 SGMS1Q86VZ5 419 aa17.91■□□□□ 0.46
CHMP4A-207ENST00000533523 RASEFQ8IZ41 740 aa17.91■□□□□ 0.46
CHMP4A-207ENST00000533523 FANCBQ8NB91 859 aa17.91■□□□□ 0.46
CHMP4A-207ENST00000533523 CYP2W1Q8TAV3 490 aa17.91■□□□□ 0.46
CHMP4A-207ENST00000533523 POF1BQ8WVV4 589 aa17.91■□□□□ 0.46
CHMP4A-207ENST00000533523 KCNB2Q92953 911 aa17.91■□□□□ 0.46
CHMP4A-207ENST00000533523 ANO3Q9BYT9 981 aa17.91■□□□□ 0.46
CHMP4A-207ENST00000533523 CELF4Q9BZC1 486 aaKnown RBP17.91■□□□□ 0.46
CHMP4A-207ENST00000533523 SQORQ9Y6N5 450 aa17.91■□□□□ 0.46
CHMP4A-207ENST00000533523 DDX39AO00148 427 aaKnown RBP17.9■□□□□ 0.46
CHMP4A-207ENST00000533523 ARP10275 920 aa17.9■□□□□ 0.46
CHMP4A-207ENST00000533523 ITGB3BPQ13352 177 aaPredicted RBP17.9■□□□□ 0.46
CHMP4A-207ENST00000533523 ADAM15Q13444 863 aa17.9■□□□□ 0.46
CHMP4A-207ENST00000533523 PPP1R18Q6NYC8 613 aa17.9■□□□□ 0.46
CHMP4A-207ENST00000533523 MTHFD1LQ6UB35 978 aa17.9■□□□□ 0.46
CHMP4A-207ENST00000533523 PLPPR4Q7Z2D5 763 aa17.9■□□□□ 0.46
CHMP4A-207ENST00000533523 RBM23Q86U06 439 aaKnown RBP17.9■□□□□ 0.46
CHMP4A-207ENST00000533523 SPPL3Q8TCT6 385 aa17.9■□□□□ 0.46
CHMP4A-207ENST00000533523 C22orf23Q9BZE7 217 aa17.9■□□□□ 0.46
CHMP4A-207ENST00000533523 PCDHGC5Q9Y5F6 944 aa17.9■□□□□ 0.46
CHMP4A-207ENST00000533523 FAM186AA6NE01 2351 aa17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 SMIM35A0A1B0GVV1 85 aa17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 BACH1O14867 736 aa17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 VCPP55072 806 aaKnown RBP17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 NFX1Q12986 1120 aaKnown RBP17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 CEP55Q53EZ4 464 aa17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 TYW1BQ6NUM6 668 aa17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 CRIPAKQ8N1N5 446 aa17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 EFHBQ8N7U6 833 aa17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 SMRP1Q8NCR6 262 aa17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 MSLNLQ96KJ4 702 aa17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 TBC1D32Q96NH3 1257 aa17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 PPP1R16BQ96T49 567 aa17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 TMX1Q9H3N1 280 aa17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 AGO4Q9HCK5 861 aaKnown RBP17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 RIC8AQ9NPQ8 531 aa17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 BARX2Q9UMQ3 279 aaPredicted RBP17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 KDM3AQ9Y4C1 1321 aa17.89■□□□□ 0.45
CHMP4A-207ENST00000533523 DENND3A2RUS2 1198 aa17.88■□□□□ 0.45
CHMP4A-207ENST00000533523 PPFIA3O75145 1194 aa17.88■□□□□ 0.45
CHMP4A-207ENST00000533523 SARSP49591 514 aaKnown RBP17.88■□□□□ 0.45
CHMP4A-207ENST00000533523 FGD1P98174 961 aa17.88■□□□□ 0.45
CHMP4A-207ENST00000533523 EXOSC10Q01780 885 aaKnown RBP17.88■□□□□ 0.45
CHMP4A-207ENST00000533523 ADCK5Q3MIX3 580 aa17.88■□□□□ 0.45
CHMP4A-207ENST00000533523 FAM160B1Q5W0V3 765 aa17.88■□□□□ 0.45
CHMP4A-207ENST00000533523 APOA5Q6Q788 366 aa17.88■□□□□ 0.45
CHMP4A-207ENST00000533523 EDAQ92838 391 aa17.88■□□□□ 0.45
CHMP4A-207ENST00000533523 MFSD14AQ96MC6 490 aa17.88■□□□□ 0.45
CHMP4A-207ENST00000533523 RBM28Q9NW13 759 aaKnown RBP17.88■□□□□ 0.45
CHMP4A-207ENST00000533523 PCDHB7Q9Y5E2 793 aa17.88■□□□□ 0.45
CHMP4A-207ENST00000533523 ZFHX4Q86UP3 3567 aa17.88■□□□□ 0.45
CHMP4A-207ENST00000533523 PTPRZ1P23471 2315 aaPredicted RBP17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 TBKBP1A7MCY6 615 aa17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 MGEA5O60502 916 aa17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 RPS6KA5O75582 802 aa17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 EYA4O95677 639 aa17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 GLP2RO95838 553 aa17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 FOSP01100 380 aaPredicted RBP17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 KLRC1P26715 233 aa17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 PSMA5P28066 241 aa17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 ZNF76P36508 570 aa17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 RTN1Q16799 776 aa17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 BMP8AQ7Z5Y6 402 aa17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 NME8Q8N427 588 aa17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 JAKMIP1Q96N16 626 aaKnown RBP17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 ERVK-5Q9HDB9 667 aa17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 TMEM260Q9NX78 707 aa17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 CLEC1BQ9P126 229 aa17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 USP15Q9Y4E8 981 aaPredicted RBP17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 PCDHB12Q9Y5F1 795 aa17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 SNX14Q9Y5W7 946 aa17.87■□□□□ 0.45
CHMP4A-207ENST00000533523 TMEM221A6NGB7 291 aa17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 M0R296 226 aa17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 CCNE2O96020 404 aa17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 SREBF1P36956 1147 aa17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 SLC26A2P50443 739 aa17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 RCAN1P53805 252 aa17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 COASYQ13057 564 aa17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 AP3B2Q13367 1082 aa17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 PDXDC2PQ6P474 469 aa17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 BLOC1S2Q6QNY1 142 aa17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 CCDC60Q8IWA6 550 aaPredicted RBP17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 MICAL1Q8TDZ2 1067 aa17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 ATP8B4Q8TF62 1192 aa17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 TCEANC2Q96MN5 208 aa17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 ADAM2Q99965 735 aa17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 HCSTQ9UBK5 93 aa17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 NOC2LQ9Y3T9 749 aaKnown RBP17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 COL1A2P08123 1366 aa17.86■□□□□ 0.45
CHMP4A-207ENST00000533523 GOLGA8AA7E2F4 631 aa17.85■□□□□ 0.45
CHMP4A-207ENST00000533523 GOLGA8BA8MQT2 603 aa17.85■□□□□ 0.45
CHMP4A-207ENST00000533523 hCG_1984214I3L0E3 225 aa17.85■□□□□ 0.45
CHMP4A-207ENST00000533523 ZBTB43O43298 467 aa17.85■□□□□ 0.45
CHMP4A-207ENST00000533523 ST18O60284 1047 aa17.85■□□□□ 0.45
CHMP4A-207ENST00000533523 HBP1O60381 514 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms