RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 SCN5AQ14524 2016 aa23.28■■□□□ 1.32
CCS-207ENST00000531990 A0A1W2PPC1 479 aa23.27■■□□□ 1.32
CCS-207ENST00000531990 STBD1O95210 358 aa23.27■■□□□ 1.32
CCS-207ENST00000531990 C22orf31O95567 290 aa23.27■■□□□ 1.32
CCS-207ENST00000531990 CTSHP09668 335 aa23.27■■□□□ 1.32
CCS-207ENST00000531990 FOXD4L5Q5VV16 416 aaPredicted RBP23.27■■□□□ 1.32
CCS-207ENST00000531990 IER5Q5VY09 327 aa23.27■■□□□ 1.32
CCS-207ENST00000531990 ANO5Q75V66 913 aa23.27■■□□□ 1.32
CCS-207ENST00000531990 DEFB128Q7Z7B8 93 aa23.27■■□□□ 1.32
CCS-207ENST00000531990 NME8Q8N427 588 aa23.27■■□□□ 1.32
CCS-207ENST00000531990 IGSF22Q8N9C0 903 aa23.27■■□□□ 1.32
CCS-207ENST00000531990 FOXD4L4Q8WXT5 416 aaPredicted RBP23.27■■□□□ 1.32
CCS-207ENST00000531990 ZBTB10Q96DT7 871 aa23.27■■□□□ 1.32
CCS-207ENST00000531990 CCDC43Q96MW1 224 aaKnown RBP23.27■■□□□ 1.32
CCS-207ENST00000531990 POLR3CQ9BUI4 534 aaPredicted RBP23.27■■□□□ 1.32
CCS-207ENST00000531990 WRAP73Q9P2S5 460 aaPredicted RBP23.27■■□□□ 1.32
CCS-207ENST00000531990 PPME1Q9Y570 386 aa23.27■■□□□ 1.32
CCS-207ENST00000531990 M0QZ92 97 aa23.26■■□□□ 1.31
CCS-207ENST00000531990 LYPLA2O95372 231 aa23.26■■□□□ 1.31
CCS-207ENST00000531990 ACRP10323 421 aa23.26■■□□□ 1.31
CCS-207ENST00000531990 TMOD1P28289 359 aa23.26■■□□□ 1.31
CCS-207ENST00000531990 CCT6AP40227 531 aaKnown RBP23.26■■□□□ 1.31
CCS-207ENST00000531990 TARBP2Q15633 366 aaKnown RBP23.26■■□□□ 1.31
CCS-207ENST00000531990 FAM173BQ6P4H8 233 aa23.26■■□□□ 1.31
CCS-207ENST00000531990 EXOC8Q8IYI6 725 aa23.26■■□□□ 1.31
CCS-207ENST00000531990 TDHQ8IZJ6 230 aa23.26■■□□□ 1.31
CCS-207ENST00000531990 CEP170P1Q96L14 293 aa23.26■■□□□ 1.31
CCS-207ENST00000531990 ZNF396Q96N95 335 aaPredicted RBP23.26■■□□□ 1.31
CCS-207ENST00000531990 JPH2Q9BR39 696 aaPredicted RBP23.26■■□□□ 1.31
CCS-207ENST00000531990 FTOQ9C0B1 505 aaKnown RBP eCLIP23.26■■□□□ 1.31
CCS-207ENST00000531990 CYP26B1Q9NR63 512 aa23.26■■□□□ 1.31
CCS-207ENST00000531990 TMEM150BA6NC51 233 aa23.25■■□□□ 1.31
CCS-207ENST00000531990 VWA3AA6NCI4 1184 aa23.25■■□□□ 1.31
CCS-207ENST00000531990 F13A1P00488 732 aa23.25■■□□□ 1.31
CCS-207ENST00000531990 RPA1P27694 616 aa23.25■■□□□ 1.31
CCS-207ENST00000531990 EPHB4P54760 987 aa23.25■■□□□ 1.31
CCS-207ENST00000531990 MRPS6P82932 125 aaKnown RBP23.25■■□□□ 1.31
CCS-207ENST00000531990 XKR9Q5GH70 373 aa23.25■■□□□ 1.31
CCS-207ENST00000531990 FAM26DQ5JW98 314 aa23.25■■□□□ 1.31
CCS-207ENST00000531990 KRT79Q5XKE5 535 aa23.25■■□□□ 1.31
CCS-207ENST00000531990 PLA2G4FQ68DD2 849 aa23.25■■□□□ 1.31
CCS-207ENST00000531990 CATSPER3Q86XQ3 398 aa23.25■■□□□ 1.31
CCS-207ENST00000531990 MAP7D2Q96T17 732 aa23.25■■□□□ 1.31
CCS-207ENST00000531990 CLIC4Q9Y696 253 aa23.25■■□□□ 1.31
CCS-207ENST00000531990 ARID2Q68CP9 1835 aa23.24■■□□□ 1.31
CCS-207ENST00000531990 MED24O75448 989 aa23.24■■□□□ 1.31
CCS-207ENST00000531990 FGBP02675 491 aa23.24■■□□□ 1.31
CCS-207ENST00000531990 ACTN1P12814 892 aa23.24■■□□□ 1.31
CCS-207ENST00000531990 MUTP22033 750 aa23.24■■□□□ 1.31
CCS-207ENST00000531990 CEBPZQ03701 1054 aaKnown RBP23.24■■□□□ 1.31
CCS-207ENST00000531990 IL17AQ16552 155 aa23.24■■□□□ 1.31
CCS-207ENST00000531990 EFCAB12Q6NXP0 572 aa23.24■■□□□ 1.31
CCS-207ENST00000531990 TRAF7Q6Q0C0 670 aa23.24■■□□□ 1.31
CCS-207ENST00000531990 SNX29Q8TEQ0 813 aa23.24■■□□□ 1.31
CCS-207ENST00000531990 NACC1Q96RE7 527 aa23.24■■□□□ 1.31
CCS-207ENST00000531990 SH2D3AQ9BRG2 576 aa23.24■■□□□ 1.31
CCS-207ENST00000531990 MTIF3Q9H2K0 278 aaKnown RBP23.24■■□□□ 1.31
CCS-207ENST00000531990 SUGCTQ9HAC7 445 aa23.24■■□□□ 1.31
CCS-207ENST00000531990 ANKEF1Q9NU02 776 aa23.24■■□□□ 1.31
CCS-207ENST00000531990 SPATA31C1P0DKV0 1188 aa23.23■■□□□ 1.31
CCS-207ENST00000531990 XRCC6P12956 609 aaKnown RBP eCLIP23.23■■□□□ 1.31
CCS-207ENST00000531990 RFC5P40937 340 aa23.23■■□□□ 1.31
CCS-207ENST00000531990 DNM2P50570 870 aa23.23■■□□□ 1.31
CCS-207ENST00000531990 NPEPPSP55786 919 aa23.23■■□□□ 1.31
CCS-207ENST00000531990 SHHQ15465 462 aa23.23■■□□□ 1.31
CCS-207ENST00000531990 TMEM240Q5SV17 173 aa23.23■■□□□ 1.31
CCS-207ENST00000531990 ZNF365Q70YC5 407 aa23.23■■□□□ 1.31
CCS-207ENST00000531990 C16orf59Q7L2K0 433 aa23.23■■□□□ 1.31
CCS-207ENST00000531990 KIAA0319LQ8IZA0 1049 aa23.23■■□□□ 1.31
CCS-207ENST00000531990 SLC7A3Q8WY07 619 aa23.23■■□□□ 1.31
CCS-207ENST00000531990 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.23■■□□□ 1.311e-7■■■□□ 18.1
CCS-207ENST00000531990 DAXXQ9UER7 740 aaPredicted RBP23.23■■□□□ 1.31
CCS-207ENST00000531990 TRPV2Q9Y5S1 764 aa23.23■■□□□ 1.31
CCS-207ENST00000531990 CDY2AQ9Y6F7 541 aa23.23■■□□□ 1.31
CCS-207ENST00000531990 MAFO75444 373 aaPredicted RBP23.22■■□□□ 1.31
CCS-207ENST00000531990 SLC34A2O95436 690 aa23.22■■□□□ 1.31
CCS-207ENST00000531990 ANP32AP39687 249 aaKnown RBP23.22■■□□□ 1.31
CCS-207ENST00000531990 POLGP54098 1239 aaPredicted RBP23.22■■□□□ 1.31
CCS-207ENST00000531990 TMEM62Q0P6H9 643 aa23.22■■□□□ 1.31
CCS-207ENST00000531990 PKP1Q13835 747 aa23.22■■□□□ 1.31
CCS-207ENST00000531990 C9orf50Q5SZB4 431 aa23.22■■□□□ 1.31
CCS-207ENST00000531990 LRRC71Q8N4P6 559 aa23.22■■□□□ 1.31
CCS-207ENST00000531990 RNPC3Q96LT9 517 aaKnown RBP23.22■■□□□ 1.31
CCS-207ENST00000531990 AK8Q96MA6 479 aa23.22■■□□□ 1.31
CCS-207ENST00000531990 USP28Q96RU2 1077 aa23.22■■□□□ 1.31
CCS-207ENST00000531990 AKT3Q9Y243 479 aa23.22■■□□□ 1.31
CCS-207ENST00000531990 PP2D1A8MPX8 630 aa23.21■■□□□ 1.31
CCS-207ENST00000531990 ZBTB39O15060 712 aa23.21■■□□□ 1.31
CCS-207ENST00000531990 NBNO60934 754 aa23.21■■□□□ 1.31
CCS-207ENST00000531990 CHRNA1P02708 482 aa23.21■■□□□ 1.31
CCS-207ENST00000531990 CXCL10P02778 98 aa23.21■■□□□ 1.31
CCS-207ENST00000531990 CLCN3P51790 818 aa23.21■■□□□ 1.31
CCS-207ENST00000531990 MBTPS1Q14703 1052 aa23.21■■□□□ 1.31
CCS-207ENST00000531990 POTEGQ6S5H5 508 aa23.21■■□□□ 1.31
CCS-207ENST00000531990 ZNF710Q8N1W2 664 aa23.21■■□□□ 1.31
CCS-207ENST00000531990 PIGOQ8TEQ8 1089 aa23.21■■□□□ 1.31
CCS-207ENST00000531990 CEP89Q96ST8 783 aa23.21■■□□□ 1.31
CCS-207ENST00000531990 CELF4Q9BZC1 486 aaKnown RBP23.21■■□□□ 1.31
CCS-207ENST00000531990 TRIOBPQ9H2D6 2365 aa23.2■■□□□ 1.3
CCS-207ENST00000531990 LOXHD1Q8IVV2 1947 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms