RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 STAG3L1P0CL83 205 aa19.07■□□□□ 0.64
CPSF1-207ENST00000531727 TOB2Q14106 344 aaPredicted RBP19.07■□□□□ 0.64
CPSF1-207ENST00000531727 TMEM266Q2M3C6 531 aa19.07■□□□□ 0.64
CPSF1-207ENST00000531727 FAM43BQ6ZT52 329 aaPredicted RBP19.07■□□□□ 0.64
CPSF1-207ENST00000531727 CMTR2Q8IYT2 770 aaKnown RBP19.07■□□□□ 0.64
CPSF1-207ENST00000531727 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.07■□□□□ 0.64
CPSF1-207ENST00000531727 BBXQ8WY36 941 aaPredicted RBP19.07■□□□□ 0.64
CPSF1-207ENST00000531727 TMX1Q9H3N1 280 aa19.07■□□□□ 0.64
CPSF1-207ENST00000531727 SH3GLB2Q9NR46 395 aa19.07■□□□□ 0.64
CPSF1-207ENST00000531727 PCDHA10Q9Y5I2 948 aa19.07■□□□□ 0.64
CPSF1-207ENST00000531727 GRM6O15303 877 aa19.06■□□□□ 0.64
CPSF1-207ENST00000531727 C22orf31O95567 290 aa19.06■□□□□ 0.64
CPSF1-207ENST00000531727 COL9A1P20849 921 aa19.06■□□□□ 0.64
CPSF1-207ENST00000531727 COL19A1Q14993 1142 aa19.06■□□□□ 0.64
CPSF1-207ENST00000531727 NEK9Q8TD19 979 aa19.06■□□□□ 0.64
CPSF1-207ENST00000531727 PABPC5Q96DU9 382 aaKnown RBP19.06■□□□□ 0.64
CPSF1-207ENST00000531727 PLVAPQ9BX97 442 aa19.06■□□□□ 0.64
CPSF1-207ENST00000531727 CDHR5Q9HBB8 845 aa19.06■□□□□ 0.64
CPSF1-207ENST00000531727 ERVK-5Q9HDB9 667 aa19.06■□□□□ 0.64
CPSF1-207ENST00000531727 GINS2Q9Y248 185 aa19.06■□□□□ 0.64
CPSF1-207ENST00000531727 MRPL42Q9Y6G3 142 aaKnown RBP19.06■□□□□ 0.64
CPSF1-207ENST00000531727 WDR81Q562E7 1941 aa19.06■□□□□ 0.64
CPSF1-207ENST00000531727 EVPLQ92817 2033 aa19.05■□□□□ 0.64
CPSF1-207ENST00000531727 EDIL3O43854 480 aa19.05■□□□□ 0.64
CPSF1-207ENST00000531727 RPS6KA5O75582 802 aa19.05■□□□□ 0.64
CPSF1-207ENST00000531727 USP11P51784 963 aa19.05■□□□□ 0.64
CPSF1-207ENST00000531727 NLRP5P59047 1200 aa19.05■□□□□ 0.64
CPSF1-207ENST00000531727 NFX1Q12986 1120 aaKnown RBP19.05■□□□□ 0.64
CPSF1-207ENST00000531727 ODR4Q5SWX8 454 aa19.05■□□□□ 0.64
CPSF1-207ENST00000531727 TRIM22Q8IYM9 498 aa19.05■□□□□ 0.64
CPSF1-207ENST00000531727 C1QTNF1Q9BXJ1 281 aa19.05■□□□□ 0.64
CPSF1-207ENST00000531727 GABBR1Q9UBS5 961 aa19.05■□□□□ 0.64
CPSF1-207ENST00000531727 CEP131Q9UPN4 1083 aa19.05■□□□□ 0.64
CPSF1-207ENST00000531727 NOC2LQ9Y3T9 749 aaKnown RBP19.05■□□□□ 0.64
CPSF1-207ENST00000531727 SAMM50Q9Y512 469 aa19.05■□□□□ 0.64
CPSF1-207ENST00000531727 CYP46A1Q9Y6A2 500 aa19.05■□□□□ 0.64
CPSF1-207ENST00000531727 WDR64B1ANS9 1081 aa19.04■□□□□ 0.64
CPSF1-207ENST00000531727 SARSP49591 514 aaKnown RBP19.04■□□□□ 0.64
CPSF1-207ENST00000531727 SSRP1Q08945 709 aaKnown RBP19.04■□□□□ 0.64
CPSF1-207ENST00000531727 PUS10Q3MIT2 529 aaKnown RBP19.04■□□□□ 0.64
CPSF1-207ENST00000531727 PAN2Q504Q3 1202 aaKnown RBP19.04■□□□□ 0.64
CPSF1-207ENST00000531727 PTCRAQ6ISU1 281 aaPredicted RBP19.04■□□□□ 0.64
CPSF1-207ENST00000531727 TMEM40Q8WWA1 233 aa19.04■□□□□ 0.64
CPSF1-207ENST00000531727 P2RX5Q93086 422 aa19.04■□□□□ 0.64
CPSF1-207ENST00000531727 ZNF274Q96GC6 653 aaPredicted RBP19.04■□□□□ 0.64
CPSF1-207ENST00000531727 FAM167AQ96KS9 214 aa19.04■□□□□ 0.64
CPSF1-207ENST00000531727 TM6SF1Q9BZW5 370 aa19.04■□□□□ 0.64
CPSF1-207ENST00000531727 LRFN2Q9ULH4 789 aa19.04■□□□□ 0.64
CPSF1-207ENST00000531727 H3BQ06 376 aaPredicted RBP19.03■□□□□ 0.64
CPSF1-207ENST00000531727 GPR182O15218 404 aa19.03■□□□□ 0.64
CPSF1-207ENST00000531727 MSH4O15457 936 aa19.03■□□□□ 0.64
CPSF1-207ENST00000531727 NCK2O43639 380 aa19.03■□□□□ 0.64
CPSF1-207ENST00000531727 MGEA5O60502 916 aa19.03■□□□□ 0.64
CPSF1-207ENST00000531727 MMP1P03956 469 aa19.03■□□□□ 0.64
CPSF1-207ENST00000531727 CRYBB1P53674 252 aaPredicted RBP19.03■□□□□ 0.64
CPSF1-207ENST00000531727 NAALADL2Q58DX5 795 aa19.03■□□□□ 0.64
CPSF1-207ENST00000531727 TRMT1LQ7Z2T5 733 aaKnown RBP19.03■□□□□ 0.64
CPSF1-207ENST00000531727 FAM178BQ8IXR5 827 aa19.03■□□□□ 0.64
CPSF1-207ENST00000531727 METTL13Q8N6R0 699 aa19.03■□□□□ 0.64
CPSF1-207ENST00000531727 RIT2Q99578 217 aa19.03■□□□□ 0.64
CPSF1-207ENST00000531727 RGS18Q9NS28 235 aa19.03■□□□□ 0.64
CPSF1-207ENST00000531727 PCDHA4Q9UN74 947 aa19.03■□□□□ 0.64
CPSF1-207ENST00000531727 ST3GAL5Q9UNP4 418 aa19.03■□□□□ 0.64
CPSF1-207ENST00000531727 BRWD1Q9NSI6 2320 aa19.03■□□□□ 0.64
CPSF1-207ENST00000531727 NCOR1O75376 2440 aa19.03■□□□□ 0.64
CPSF1-207ENST00000531727 DENND3A2RUS2 1198 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 GRXCR2A6NFK2 248 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 CPLX1O14810 134 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 MAGEB2O15479 319 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 GPR32O75388 356 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 DEXIO95424 95 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 VTNP04004 478 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 IL9P15248 144 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 KIZQ2M2Z5 673 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 EP400NLQ6ZTU2 488 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 TBCKQ8TEA7 893 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 SLC5A5Q92911 643 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 PPP1R16BQ96T49 567 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 OSMRQ99650 979 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 ADAM2Q99965 735 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 C22orf23Q9BZE7 217 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 ALG13Q9NP73 1137 aaKnown RBP19.02■□□□□ 0.64
CPSF1-207ENST00000531727 CD320Q9NPF0 282 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 DISC1Q9NRI5 854 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 C1orf112Q9NSG2 853 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 RNF216Q9NWF9 866 aaPredicted RBP19.02■□□□□ 0.64
CPSF1-207ENST00000531727 CLDND1Q9NY35 253 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 PLAGL2Q9UPG8 496 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 PCDHB7Q9Y5E2 793 aa19.02■□□□□ 0.64
CPSF1-207ENST00000531727 ZNF862O60290 1169 aa19.01■□□□□ 0.63
CPSF1-207ENST00000531727 GAS7O60861 476 aa19.01■□□□□ 0.63
CPSF1-207ENST00000531727 OATP04181 439 aa19.01■□□□□ 0.63
CPSF1-207ENST00000531727 SFNP31947 248 aa19.01■□□□□ 0.63
CPSF1-207ENST00000531727 GATMP50440 423 aa19.01■□□□□ 0.63
CPSF1-207ENST00000531727 CLCN3P51790 818 aa19.01■□□□□ 0.63
CPSF1-207ENST00000531727 HYAL1Q12794 435 aa19.01■□□□□ 0.63
CPSF1-207ENST00000531727 CTC1Q2NKJ3 1217 aa19.01■□□□□ 0.63
CPSF1-207ENST00000531727 LRCH2Q5VUJ6 765 aa19.01■□□□□ 0.63
CPSF1-207ENST00000531727 FAM228AQ86W67 206 aa19.01■□□□□ 0.63
CPSF1-207ENST00000531727 BLIDQ8IZY5 108 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms