RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SF3B2Q13435 895 aaKnown RBP6.2□□□□□ -1.42
PCF11-205ENST00000530906 KCNJ12Q14500 433 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 TMEM119Q4V9L6 283 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 FIGNQ5HY92 759 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 JAKMIP3Q5VZ66 844 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 HAUS3Q68CZ6 603 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 KLHL10Q6JEL2 608 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 UNC13DQ70J99 1090 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 TMTC1Q8IUR5 882 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 TMEM139Q8IV31 216 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 ZSCAN29Q8IWY8 852 aaPredicted RBP6.2□□□□□ -1.42
PCF11-205ENST00000530906 MICALL1Q8N3F8 863 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 C17orf53Q8N3J3 647 aaPredicted RBP6.2□□□□□ -1.42
PCF11-205ENST00000530906 GUF1Q8N442 669 aaKnown RBP6.2□□□□□ -1.42
PCF11-205ENST00000530906 SAMD3Q8N6K7 520 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 TC2NQ8N9U0 490 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 ERMNQ8TAM6 284 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 ZNF417Q8TAU3 575 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 ADAMTS19Q8TE59 1207 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 FAM151AQ8WW52 585 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 LARP4BQ92615 738 aaKnown RBP6.2□□□□□ -1.42
PCF11-205ENST00000530906 DPF2Q92785 391 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 POM121Q96HA1 1249 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 ERO1AQ96HE7 468 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 PPP1R13BQ96KQ4 1090 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 FAM20AQ96MK3 541 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 MED15Q96RN5 788 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 ZNF587Q96SQ5 575 aaPredicted RBP6.2□□□□□ -1.42
PCF11-205ENST00000530906 UBA5Q9GZZ9 404 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 DNAJC18Q9H819 358 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 L2HGDHQ9H9P8 463 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 VAT1LQ9HCJ6 419 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 SAMSN1Q9NSI8 373 aaKnown RBP6.2□□□□□ -1.42
PCF11-205ENST00000530906 MYO1AQ9UBC5 1043 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 DDX25Q9UHL0 483 aaKnown RBP6.2□□□□□ -1.42
PCF11-205ENST00000530906 KIAA1024Q9UPX6 916 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 CTNND2Q9UQB3 1225 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 FRMPD2Q68DX3 1309 aaPredicted RBP6.2□□□□□ -1.42
PCF11-205ENST00000530906 PITPNM2Q9BZ72 1349 aa6.2□□□□□ -1.42
PCF11-205ENST00000530906 MYH7BA7E2Y1 1941 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 DDTLA6NHG4 134 aaPredicted RBP6.19□□□□□ -1.42
PCF11-205ENST00000530906 F5H6K3 240 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 MARCH6O60337 910 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 ALBP02768 609 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 CYP3A4P08684 503 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 BMP3P12645 472 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 NID1P14543 1247 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 CIITAP33076 1130 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 PRCPP42785 496 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 TNNI2P48788 182 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 COPB1P53618 953 aaKnown RBP6.19□□□□□ -1.42
PCF11-205ENST00000530906 TGFB2P61812 414 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 ASIC1P78348 528 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 CLDN10P78369 228 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 KLRC3Q07444 240 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 SPEM2Q0P670 501 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 HSP90AA2PQ14568 343 aaPredicted RBP6.19□□□□□ -1.42
PCF11-205ENST00000530906 KRT31Q15323 416 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 DLGAP5Q15398 846 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 CDC37Q16543 378 aaPredicted RBP6.19□□□□□ -1.42
PCF11-205ENST00000530906 AOC3Q16853 763 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 QRICH1Q2TAL8 776 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 Q4G0T1 1027 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 PRRT3Q5FWE3 981 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 SYDE2Q5VT97 1194 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 C1orf53Q5VUE5 145 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 MSL1Q68DK7 614 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 CENPPQ6IPU0 288 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 TTI2Q6NXR4 508 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 C20orf204Q6ZNR8 217 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 C8orf86Q6ZUL3 223 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 CCDC84Q86UT8 332 aaPredicted RBP6.19□□□□□ -1.42
PCF11-205ENST00000530906 FAM160B2Q86V87 743 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 FBXO11Q86XK2 927 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 TPCN2Q8NHX9 752 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 CHURC1Q8WUH1 139 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 CRYGNQ8WXF5 182 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 RAD54LQ92698 747 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 P2RX5Q93086 422 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 CSRNP1Q96S65 589 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 GMLQ99445 158 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 MMTAG2Q9BU76 263 aaKnown RBP6.19□□□□□ -1.42
PCF11-205ENST00000530906 EDEM3Q9BZQ6 932 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 MAF1Q9H063 256 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 DEFB129Q9H1M3 183 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 BLZF1Q9H2G9 400 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 NEUROD4Q9HD90 331 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 KCNMB3Q9NPA1 279 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 TPSG1Q9NRR2 321 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 ZNHIT6Q9NWK9 470 aaKnown RBP6.19□□□□□ -1.42
PCF11-205ENST00000530906 BIN2Q9UBW5 565 aaPredicted RBP6.19□□□□□ -1.42
PCF11-205ENST00000530906 PCDHA12Q9UN75 941 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 MTMR7Q9Y216 660 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 PPP2R2CQ9Y2T4 447 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 TMX2Q9Y320 296 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 PCDHA1Q9Y5I3 950 aa6.19□□□□□ -1.42
PCF11-205ENST00000530906 A0A1W2PQJ5 194 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 USP17L10C9JJH3 530 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 TMEM232C9JQI7 657 aa6.18□□□□□ -1.42
PCF11-205ENST00000530906 FAM229AH3BQW9 127 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms