RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 PCDHA12Q9UN75 941 aa18.95■□□□□ 0.62
SF3B2-209ENST00000530322 TMEM265A0A087WTH1 108 aa18.94■□□□□ 0.62
SF3B2-209ENST00000530322 EFCAB14O75071 495 aa18.94■□□□□ 0.62
SF3B2-209ENST00000530322 GHRP10912 638 aa18.94■□□□□ 0.62
SF3B2-209ENST00000530322 TRAPPC10P48553 1259 aa18.94■□□□□ 0.62
SF3B2-209ENST00000530322 ORC2Q13416 577 aaPredicted RBP18.94■□□□□ 0.62
SF3B2-209ENST00000530322 LPIN1Q14693 890 aa18.94■□□□□ 0.62
SF3B2-209ENST00000530322 EPHA7Q15375 998 aa18.94■□□□□ 0.62
SF3B2-209ENST00000530322 TARBP2Q15633 366 aaKnown RBP18.94■□□□□ 0.62
SF3B2-209ENST00000530322 FBXO47Q5MNV8 452 aa18.94■□□□□ 0.62
SF3B2-209ENST00000530322 ZNF697Q5TEC3 545 aa18.94■□□□□ 0.62
SF3B2-209ENST00000530322 NCAPH2Q6IBW4 605 aa18.94■□□□□ 0.62
SF3B2-209ENST00000530322 SEPT8Q92599 483 aa18.94■□□□□ 0.62
SF3B2-209ENST00000530322 NIFKQ9BYG3 293 aaKnown RBP18.94■□□□□ 0.62
SF3B2-209ENST00000530322 TTYH1Q9H313 450 aaPredicted RBP18.94■□□□□ 0.62
SF3B2-209ENST00000530322 TTC12Q9H892 705 aaPredicted RBP18.94■□□□□ 0.62
SF3B2-209ENST00000530322 MTMR10Q9NXD2 777 aa18.94■□□□□ 0.62
SF3B2-209ENST00000530322 TRPV2Q9Y5S1 764 aa18.94■□□□□ 0.62
SF3B2-209ENST00000530322 CHD9Q3L8U1 2897 aa18.94■□□□□ 0.62
SF3B2-209ENST00000530322 TMEM150BA6NC51 233 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 M0QZ92 97 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 MAGEB2O15479 319 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 P4HBP07237 508 aaKnown RBP18.93■□□□□ 0.62
SF3B2-209ENST00000530322 TXKP42681 527 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 QARSP47897 775 aaKnown RBP18.93■□□□□ 0.62
SF3B2-209ENST00000530322 KCNJ6P48051 423 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 RABGGTBP53611 331 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 DEFB103AP81534 67 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 TMEM62Q0P6H9 643 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 ZNF174Q15697 407 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 RAB30Q15771 203 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 TTC38Q5R3I4 469 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 LINC01465Q8N7H1 131 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 TIFAQ96CG3 184 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 CEP89Q96ST8 783 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 IFIH1Q9BYX4 1025 aaKnown RBP18.93■□□□□ 0.62
SF3B2-209ENST00000530322 CELF4Q9BZC1 486 aaKnown RBP18.93■□□□□ 0.62
SF3B2-209ENST00000530322 SEMA6BQ9H3T3 888 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 WRAP73Q9P2S5 460 aaPredicted RBP18.93■□□□□ 0.62
SF3B2-209ENST00000530322 SEPT9Q9UHD8 586 aaPredicted RBP18.93■□□□□ 0.62
SF3B2-209ENST00000530322 NOL7Q9UMY1 257 aaKnown RBP18.93■□□□□ 0.62
SF3B2-209ENST00000530322 YBX2Q9Y2T7 364 aaKnown RBP18.93■□□□□ 0.62
SF3B2-209ENST00000530322 PCDHA11Q9Y5I1 949 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 KDM3AQ9Y4C1 1321 aa18.93■□□□□ 0.62
SF3B2-209ENST00000530322 DDX11L8A8MPP1 907 aa18.92■□□□□ 0.62
SF3B2-209ENST00000530322 TOB1P50616 345 aaPredicted RBP18.92■□□□□ 0.62
SF3B2-209ENST00000530322 TSHZ1Q6ZSZ6 1077 aa18.92■□□□□ 0.62
SF3B2-209ENST00000530322 ANO5Q75V66 913 aa18.92■□□□□ 0.62
SF3B2-209ENST00000530322 HERC6Q8IVU3 1022 aa18.92■□□□□ 0.62
SF3B2-209ENST00000530322 METTL13Q8N6R0 699 aa18.92■□□□□ 0.62
SF3B2-209ENST00000530322 APBB2Q92870 758 aa18.92■□□□□ 0.62
SF3B2-209ENST00000530322 RGL1Q9NZL6 768 aa18.92■□□□□ 0.62
SF3B2-209ENST00000530322 MSRAQ9UJ68 235 aa18.92■□□□□ 0.62
SF3B2-209ENST00000530322 SQORQ9Y6N5 450 aa18.92■□□□□ 0.62
SF3B2-209ENST00000530322 H3BQV1 296 aa18.91■□□□□ 0.62
SF3B2-209ENST00000530322 DKC1O60832 514 aaKnown RBP eCLIP18.91■□□□□ 0.62
SF3B2-209ENST00000530322 MYOGP15173 224 aa18.91■□□□□ 0.62
SF3B2-209ENST00000530322 CLCN3P51790 818 aa18.91■□□□□ 0.62
SF3B2-209ENST00000530322 TBC1D8BQ0IIM8 1120 aa18.91■□□□□ 0.62
SF3B2-209ENST00000530322 NBR1Q14596 966 aa18.91■□□□□ 0.62
SF3B2-209ENST00000530322 MTERF2Q49AM1 385 aa18.91■□□□□ 0.62
SF3B2-209ENST00000530322 LARP1BQ659C4 914 aaKnown RBP18.91■□□□□ 0.62
SF3B2-209ENST00000530322 MCTP1Q6DN14 999 aa18.91■□□□□ 0.62
SF3B2-209ENST00000530322 EFCAB12Q6NXP0 572 aa18.91■□□□□ 0.62
SF3B2-209ENST00000530322 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.91■□□□□ 0.621e-7■■■■■ 27.6
SF3B2-209ENST00000530322 C4orf19Q8IY42 314 aa18.91■□□□□ 0.62
SF3B2-209ENST00000530322 USP38Q8NB14 1042 aa18.91■□□□□ 0.62
SF3B2-209ENST00000530322 DYDC2Q96IM9 177 aa18.91■□□□□ 0.62
SF3B2-209ENST00000530322 FAM161BQ96MY7 647 aa18.91■□□□□ 0.62
SF3B2-209ENST00000530322 EIF2AK1Q9BQI3 630 aaKnown RBP18.91■□□□□ 0.62
SF3B2-209ENST00000530322 LXNQ9BS40 222 aa18.91■□□□□ 0.62
SF3B2-209ENST00000530322 AGO3Q9H9G7 860 aaKnown RBP18.91■□□□□ 0.62
SF3B2-209ENST00000530322 CHD7Q9P2D1 2997 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 CDH23Q9H251 3354 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 SLITRK3O94933 977 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 VTNP04004 478 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 OR52Z1P0C646 297 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 CYP4A11Q02928 519 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 TMCO2Q7Z6W1 182 aaPredicted RBP18.9■□□□□ 0.62
SF3B2-209ENST00000530322 LRRC71Q8N4P6 559 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 C4orf32Q8N8J7 132 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 GUCD1Q96NT3 240 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 HSD17B14Q9BPX1 270 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 SH2D3AQ9BRG2 576 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 NKX2-4Q9H2Z4 354 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 ZNF576Q9H609 170 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 ZSWIM4Q9H7M6 989 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 CDHR5Q9HBB8 845 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 PCDHB6Q9Y5E3 794 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 ARID2Q68CP9 1835 aa18.9■□□□□ 0.62
SF3B2-209ENST00000530322 IGKV6-21A0A0C4DH24 114 aa18.89■□□□□ 0.61
SF3B2-209ENST00000530322 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.89■□□□□ 0.61
SF3B2-209ENST00000530322 POTEMA6NI47 508 aa18.89■□□□□ 0.61
SF3B2-209ENST00000530322 K7ELQ4 463 aaPredicted RBP18.89■□□□□ 0.61
SF3B2-209ENST00000530322 GPR32O75388 356 aa18.89■□□□□ 0.61
SF3B2-209ENST00000530322 TMOD1P28289 359 aa18.89■□□□□ 0.61
SF3B2-209ENST00000530322 CD52P31358 61 aa18.89■□□□□ 0.61
SF3B2-209ENST00000530322 CTTNQ14247 550 aaKnown RBP18.89■□□□□ 0.61
SF3B2-209ENST00000530322 PLA2G4FQ68DD2 849 aa18.89■□□□□ 0.61
SF3B2-209ENST00000530322 NEK9Q8TD19 979 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms