RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 USP17L6PQ6QN14 398 aa10.32□□□□□ -0.76
VPS11-203ENST00000529545 CYB5R4Q7L1T6 521 aa10.32□□□□□ -0.76
VPS11-203ENST00000529545 RALYLQ86SE5 291 aaKnown RBP10.32□□□□□ -0.76
VPS11-203ENST00000529545 RTN4RL1Q86UN2 441 aaPredicted RBP10.32□□□□□ -0.76
VPS11-203ENST00000529545 LINC01599Q8WXQ3 324 aa10.32□□□□□ -0.76
VPS11-203ENST00000529545 RRP36Q96EU6 259 aaKnown RBP10.32□□□□□ -0.76
VPS11-203ENST00000529545 TLR9Q9NR96 1032 aa10.32□□□□□ -0.76
VPS11-203ENST00000529545 TELO2Q9Y4R8 837 aa10.32□□□□□ -0.76
VPS11-203ENST00000529545 GSTTP1A0A1W2PQM5 241 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 PIK3CDO00329 1044 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 MAFGO15525 162 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 GLP2RO95838 553 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 KCNA2P16389 499 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 KIF5BP33176 963 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 TMEM62Q0P6H9 643 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 NFX1Q12986 1120 aaKnown RBP10.31□□□□□ -0.76
VPS11-203ENST00000529545 MTMR1Q13613 665 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 SLC35G1Q2M3R5 365 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 ODR4Q5SWX8 454 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 MARCH8Q5T0T0 291 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 THNSL1Q8IYQ7 743 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 CRIPAKQ8N1N5 446 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 NME8Q8N427 588 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 ATP8B4Q8TF62 1192 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 SUSD6Q92537 303 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 CELF4Q9BZC1 486 aaKnown RBP10.31□□□□□ -0.76
VPS11-203ENST00000529545 OSBPL3Q9H4L5 887 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 PKD2L1Q9P0L9 805 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 PUF60Q9UHX1 559 aaKnown RBP10.31□□□□□ -0.76
VPS11-203ENST00000529545 NR2E1Q9Y466 385 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 PLXNA4Q9HCM2 1894 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 LOXHD1Q8IVV2 1947 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 IGSF9BQ9UPX0 1349 aa10.31□□□□□ -0.76
VPS11-203ENST00000529545 ZDBF2Q9HCK1 2354 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 DENND3A2RUS2 1198 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 TBKBP1A7MCY6 615 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 H0Y858 1186 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 MEIS2O14770 477 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 ATP9AO75110 1047 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 FGF18O76093 207 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 HOXB8P17481 243 aaPredicted RBP10.3□□□□□ -0.76
VPS11-203ENST00000529545 SARSP49591 514 aaKnown RBP10.3□□□□□ -0.76
VPS11-203ENST00000529545 GATMP50440 423 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 KRT76Q01546 638 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 TROAPQ12815 778 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 DUSP6Q16828 381 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 CHD1LQ86WJ1 897 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 PLEKHM2Q8IWE5 1019 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 ZNF454Q8N9F8 522 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 CTCFLQ8NI51 663 aaPredicted RBP10.3□□□□□ -0.76
VPS11-203ENST00000529545 RNF166Q96A37 237 aaPredicted RBP10.3□□□□□ -0.76
VPS11-203ENST00000529545 ASIC4Q96FT7 647 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 RIPOR3Q96MK2 946 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 LZTS2Q9BRK4 669 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 RWDD1Q9H446 243 aaPredicted RBP10.3□□□□□ -0.76
VPS11-203ENST00000529545 PSTPIP2Q9H939 334 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 C1orf112Q9NSG2 853 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 TMEM260Q9NX78 707 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 PCDHGC5Q9Y5F6 944 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 PCDHA2Q9Y5H9 948 aa10.3□□□□□ -0.76
VPS11-203ENST00000529545 SMIM35A0A1B0GVV1 85 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 SPDYE3A6NKU9 549 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 RPS6KA5O75582 802 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 LAG3P18627 525 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 SMARCA1P28370 1054 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 TECP42680 631 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 GNAQP50148 359 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 TMEM266Q2M3C6 531 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 ANKRD54Q6NXT1 300 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 TMEM184AQ6ZMB5 413 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 SLC24A5Q71RS6 500 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 UBALD2Q8IYN6 164 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 NCOA7Q8NI08 942 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 SDF4Q9BRK5 362 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 SPZ1Q9BXG8 430 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 JPH1Q9HDC5 661 aaPredicted RBP10.29□□□□□ -0.76
VPS11-203ENST00000529545 ENTPD7Q9NQZ7 604 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 TSHZ2Q9NRE2 1034 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 SLC9A2Q9UBY0 812 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 GINS2Q9Y248 185 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 ZFHX2Q9C0A1 2572 aaPredicted RBP10.29□□□□□ -0.76
VPS11-203ENST00000529545 KDM3AQ9Y4C1 1321 aa10.29□□□□□ -0.76
VPS11-203ENST00000529545 PROB1E7EW31 1015 aa10.28□□□□□ -0.76
VPS11-203ENST00000529545 TK2O00142 265 aa10.28□□□□□ -0.76
VPS11-203ENST00000529545 GPR182O15218 404 aa10.28□□□□□ -0.76
VPS11-203ENST00000529545 ITGB5P18084 799 aa10.28□□□□□ -0.76
VPS11-203ENST00000529545 SP100P23497 879 aaPredicted RBP10.28□□□□□ -0.76
VPS11-203ENST00000529545 STAT5BP51692 787 aa10.28□□□□□ -0.76
VPS11-203ENST00000529545 FOSBP53539 338 aa10.28□□□□□ -0.76
VPS11-203ENST00000529545 ERVFC1P60507 584 aa10.28□□□□□ -0.76
VPS11-203ENST00000529545 RBM10P98175 930 aaKnown RBP10.28□□□□□ -0.76
VPS11-203ENST00000529545 KRT17Q04695 432 aa10.28□□□□□ -0.76
VPS11-203ENST00000529545 MTMR3Q13615 1198 aa10.28□□□□□ -0.76
VPS11-203ENST00000529545 AAMPQ13685 434 aa10.28□□□□□ -0.76
VPS11-203ENST00000529545 PLCB4Q15147 1175 aa10.28□□□□□ -0.76
VPS11-203ENST00000529545 TPRNQ4KMQ1 711 aa10.28□□□□□ -0.76
VPS11-203ENST00000529545 PLPP4Q5VZY2 271 aa10.28□□□□□ -0.76
VPS11-203ENST00000529545 CES5AQ6NT32 575 aa10.28□□□□□ -0.76
VPS11-203ENST00000529545 PLPPR4Q7Z2D5 763 aa10.28□□□□□ -0.76
VPS11-203ENST00000529545 SMC5Q8IY18 1101 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms