RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 XIRP2A4UGR9 3374 aa13.62□□□□□ -0.23
COPB1-206ENST00000529210 DLL1O00548 723 aa13.62□□□□□ -0.23
COPB1-206ENST00000529210 ENPP3O14638 875 aa13.62□□□□□ -0.23
COPB1-206ENST00000529210 MAGEB2O15479 319 aa13.62□□□□□ -0.23
COPB1-206ENST00000529210 GTPBP6O43824 516 aaPredicted RBP13.62□□□□□ -0.23
COPB1-206ENST00000529210 ZNF862O60290 1169 aa13.62□□□□□ -0.23
COPB1-206ENST00000529210 GAS7O60861 476 aa13.62□□□□□ -0.23
COPB1-206ENST00000529210 SEC24BO95487 1268 aa13.62□□□□□ -0.23
COPB1-206ENST00000529210 TDP2O95551 362 aa13.62□□□□□ -0.23
COPB1-206ENST00000529210 FDPSP14324 419 aaKnown RBP13.62□□□□□ -0.23
COPB1-206ENST00000529210 GCFC2P16383 781 aaKnown RBP13.62□□□□□ -0.23
COPB1-206ENST00000529210 GRB10Q13322 594 aa13.62□□□□□ -0.23
COPB1-206ENST00000529210 LRCH2Q5VUJ6 765 aa13.62□□□□□ -0.23
COPB1-206ENST00000529210 SPRED2Q7Z698 418 aa13.62□□□□□ -0.23
COPB1-206ENST00000529210 ATXN2LQ8WWM7 1075 aaKnown RBP13.62□□□□□ -0.23
COPB1-206ENST00000529210 ARNTL2Q8WYA1 636 aa13.62□□□□□ -0.23
COPB1-206ENST00000529210 ZBTB10Q96DT7 871 aa13.62□□□□□ -0.23
COPB1-206ENST00000529210 FAM49AQ9H0Q0 323 aaPredicted RBP13.62□□□□□ -0.23
COPB1-206ENST00000529210 ORC3Q9UBD5 711 aaPredicted RBP13.62□□□□□ -0.23
COPB1-206ENST00000529210 GABBR1Q9UBS5 961 aa13.62□□□□□ -0.23
COPB1-206ENST00000529210 KCNJ14Q9UNX9 436 aa13.62□□□□□ -0.23
COPB1-206ENST00000529210 RFXAPO00287 272 aa13.61□□□□□ -0.23
COPB1-206ENST00000529210 TBX3O15119 743 aa13.61□□□□□ -0.23
COPB1-206ENST00000529210 LARGE1O95461 756 aa13.61□□□□□ -0.23
COPB1-206ENST00000529210 NEK4P51957 841 aa13.61□□□□□ -0.23
COPB1-206ENST00000529210 INF2Q27J81 1249 aa13.61□□□□□ -0.23
COPB1-206ENST00000529210 NEK8Q86SG6 692 aa13.61□□□□□ -0.23
COPB1-206ENST00000529210 NSUN7Q8NE18 718 aaKnown RBP13.61□□□□□ -0.23
COPB1-206ENST00000529210 LINC01599Q8WXQ3 324 aa13.61□□□□□ -0.23
COPB1-206ENST00000529210 ZNF689Q96CS4 500 aaPredicted RBP13.61□□□□□ -0.23
COPB1-206ENST00000529210 FAM20AQ96MK3 541 aa13.61□□□□□ -0.23
COPB1-206ENST00000529210 YME1L1Q96TA2 773 aa13.61□□□□□ -0.23
COPB1-206ENST00000529210 NAP1L4Q99733 375 aaKnown RBP13.61□□□□□ -0.23
COPB1-206ENST00000529210 COL25A1Q9BXS0 654 aaPredicted RBP13.61□□□□□ -0.23
COPB1-206ENST00000529210 TSPYL2Q9H2G4 693 aaPredicted RBP13.61□□□□□ -0.23
COPB1-206ENST00000529210 UNC45AQ9H3U1 944 aa13.61□□□□□ -0.23
COPB1-206ENST00000529210 CERS4Q9HA82 394 aa13.61□□□□□ -0.23
COPB1-206ENST00000529210 SUGCTQ9HAC7 445 aa13.61□□□□□ -0.23
COPB1-206ENST00000529210 KCNMB3Q9NPA1 279 aa13.61□□□□□ -0.23
COPB1-206ENST00000529210 THEGQ9P2T0 379 aa13.61□□□□□ -0.23
COPB1-206ENST00000529210 PADI3Q9ULW8 664 aa13.61□□□□□ -0.23
COPB1-206ENST00000529210 NLRC5Q86WI3 1866 aa13.61□□□□□ -0.23
COPB1-206ENST00000529210 MUC3AQ02505 3323 aa13.6□□□□□ -0.23
COPB1-206ENST00000529210 CCDC194A0A1B0GVG4 234 aa13.6□□□□□ -0.23
COPB1-206ENST00000529210 C5orf67F2Z3F1 127 aa13.6□□□□□ -0.23
COPB1-206ENST00000529210 OATP04181 439 aa13.6□□□□□ -0.23
COPB1-206ENST00000529210 LINC00271P0C7V0 271 aa13.6□□□□□ -0.23
COPB1-206ENST00000529210 CD52P31358 61 aa13.6□□□□□ -0.23
COPB1-206ENST00000529210 PPP2R5CQ13362 524 aa13.6□□□□□ -0.23
COPB1-206ENST00000529210 TARBP2Q15633 366 aaKnown RBP13.6□□□□□ -0.23
COPB1-206ENST00000529210 TJAP1Q5JTD0 557 aa13.6□□□□□ -0.23
COPB1-206ENST00000529210 ODR4Q5SWX8 454 aa13.6□□□□□ -0.23
COPB1-206ENST00000529210 FAM117BQ6P1L5 589 aa13.6□□□□□ -0.23
COPB1-206ENST00000529210 SYMPKQ92797 1274 aaKnown RBP13.6□□□□□ -0.23
COPB1-206ENST00000529210 TNFRSF25Q93038 417 aa13.6□□□□□ -0.23
COPB1-206ENST00000529210 NIFKQ9BYG3 293 aaKnown RBP13.6□□□□□ -0.23
COPB1-206ENST00000529210 NRBP2Q9NSY0 501 aa13.6□□□□□ -0.23
COPB1-206ENST00000529210 DDX25Q9UHL0 483 aaKnown RBP13.6□□□□□ -0.23
COPB1-206ENST00000529210 SAMM50Q9Y512 469 aa13.6□□□□□ -0.23
COPB1-206ENST00000529210 RBAK-RBAKDNI3L0D1 243 aa13.59□□□□□ -0.23
COPB1-206ENST00000529210 SLC37A4O43826 429 aa13.59□□□□□ -0.23
COPB1-206ENST00000529210 GPR32O75388 356 aa13.59□□□□□ -0.23
COPB1-206ENST00000529210 STBD1O95210 358 aa13.59□□□□□ -0.23
COPB1-206ENST00000529210 CRYBB1P53674 252 aaPredicted RBP13.59□□□□□ -0.23
COPB1-206ENST00000529210 PRKCEQ02156 737 aa13.59□□□□□ -0.23
COPB1-206ENST00000529210 PAK2Q13177 524 aa13.59□□□□□ -0.23
COPB1-206ENST00000529210 UGCGQ16739 394 aa13.59□□□□□ -0.23
COPB1-206ENST00000529210 C8orf34Q49A92 452 aa13.59□□□□□ -0.23
COPB1-206ENST00000529210 MIER3Q7Z3K6 550 aa13.59□□□□□ -0.23
COPB1-206ENST00000529210 RTN4RL1Q86UN2 441 aaPredicted RBP13.59□□□□□ -0.23
COPB1-206ENST00000529210 CKAP2LQ8IYA6 745 aa13.59□□□□□ -0.23
COPB1-206ENST00000529210 CLP1Q92989 425 aaKnown RBP13.59□□□□□ -0.23
COPB1-206ENST00000529210 UIMC1Q96RL1 719 aa13.59□□□□□ -0.23
COPB1-206ENST00000529210 CEP89Q96ST8 783 aa13.59□□□□□ -0.23
COPB1-206ENST00000529210 ERVK-5Q9HDB9 667 aa13.59□□□□□ -0.23
COPB1-206ENST00000529210 RWDD3Q9Y3V2 267 aa13.59□□□□□ -0.23
COPB1-206ENST00000529210 TTC28Q96AY4 2481 aa13.58□□□□□ -0.23
COPB1-206ENST00000529210 IGKV6-21A0A0C4DH24 114 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 H3BNC9 293 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 DGKIO75912 1065 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 RB1P06400 928 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 TMOD1P28289 359 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 KRT2P35908 639 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 TMEM62Q0P6H9 643 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 ST3GAL1Q11201 340 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 LETM2Q2VYF4 491 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 EPC2Q52LR7 807 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 XKR3Q5GH77 459 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 NPAS4Q8IUM7 802 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 NECAB1Q8N987 351 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 IL27Q8NEV9 243 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 FBXO22Q8NEZ5 403 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 OXER1Q8TDS5 423 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 GDPD5Q8WTR4 605 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 TMEM40Q8WWA1 233 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 C17orf80Q9BSJ5 609 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 TMX1Q9H3N1 280 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 BRMS1Q9HCU9 246 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 PRDM6Q9NQX0 595 aa13.58□□□□□ -0.24
COPB1-206ENST00000529210 GJB4Q9NTQ9 266 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms