RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 ITGA7Q13683 1181 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 HIC1Q14526 733 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 TARBP2Q15633 366 aaKnown RBP12.77□□□□□ -0.37
CAPN1-217ENST00000529133 GRIK4Q16099 956 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 MTERF2Q49AM1 385 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 XKR9Q5GH70 373 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 ZNF484Q5JVG2 852 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 NFRKBQ6P4R8 1299 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 OTUD6AQ7L8S5 288 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 SESTD1Q86VW0 696 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 C7orf31Q8N865 590 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 IQUBQ8NA54 791 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 ENGASEQ8NFI3 743 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 LMBR1Q8WVP7 490 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 TRAPPC12Q8WVT3 735 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 VTI1AQ96AJ9 217 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 CEP170P1Q96L14 293 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 CEP89Q96ST8 783 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 SH2D3AQ9BRG2 576 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 CUEDC2Q9H467 287 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 CYP26B1Q9NR63 512 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 HDAC6Q9UBN7 1215 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 USP25Q9UHP3 1055 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 SERTAD1Q9UHV2 236 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 HTTP42858 3142 aa12.77□□□□□ -0.37
CAPN1-217ENST00000529133 ARHGEF35A5YM69 484 aa12.76□□□□□ -0.37
CAPN1-217ENST00000529133 ZNF202O95125 648 aa12.76□□□□□ -0.37
CAPN1-217ENST00000529133 SSBP05455 408 aaKnown RBP eCLIP12.76□□□□□ -0.37
CAPN1-217ENST00000529133 HOXC8P31273 242 aa12.76□□□□□ -0.37
CAPN1-217ENST00000529133 SLC12A3P55017 1021 aa12.76□□□□□ -0.37
CAPN1-217ENST00000529133 IGBP1P78318 339 aa12.76□□□□□ -0.37
CAPN1-217ENST00000529133 PTPN11Q06124 597 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-217ENST00000529133 SNW1Q13573 536 aaKnown RBP12.76□□□□□ -0.37
CAPN1-217ENST00000529133 MCM6Q14566 821 aa12.76□□□□□ -0.37
CAPN1-217ENST00000529133 LONRF3Q496Y0 759 aa12.76□□□□□ -0.37
CAPN1-217ENST00000529133 FAM47CQ5HY64 1035 aa12.76□□□□□ -0.37
CAPN1-217ENST00000529133 TNS4Q8IZW8 715 aa12.76□□□□□ -0.37
CAPN1-217ENST00000529133 SYT2Q8N9I0 419 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-217ENST00000529133 SLC43A3Q8NBI5 491 aa12.76□□□□□ -0.37
CAPN1-217ENST00000529133 LARP4BQ92615 738 aaKnown RBP12.76□□□□□ -0.37
CAPN1-217ENST00000529133 PAWRQ96IZ0 340 aaKnown RBP12.76□□□□□ -0.37
CAPN1-217ENST00000529133 CCDC43Q96MW1 224 aaKnown RBP12.76□□□□□ -0.37
CAPN1-217ENST00000529133 RUSC1Q9BVN2 902 aa12.76□□□□□ -0.37
CAPN1-217ENST00000529133 SENP6Q9GZR1 1112 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-217ENST00000529133 C11orf49Q9H6J7 331 aa12.76□□□□□ -0.37
CAPN1-217ENST00000529133 SETD4Q9NVD3 440 aa12.76□□□□□ -0.37
CAPN1-217ENST00000529133 GTF2IRD1Q9UHL9 959 aa12.76□□□□□ -0.37
CAPN1-217ENST00000529133 PPME1Q9Y570 386 aa12.76□□□□□ -0.37
CAPN1-217ENST00000529133 SCN10AQ9Y5Y9 1956 aa12.76□□□□□ -0.37
CAPN1-217ENST00000529133 C17orf102A2RUQ5 167 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 RRN3P2A6NIE6 340 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 ARVCFO00192 962 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 NR1I2O75469 434 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 C22orf31O95567 290 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 SLFN14P0C7P3 912 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 RFC5P40937 340 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 ADAM17P78536 824 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 DHX8Q14562 1220 aaKnown RBP12.75□□□□□ -0.37
CAPN1-217ENST00000529133 MARCH8Q5T0T0 291 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 GDF6Q6KF10 455 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-217ENST00000529133 PADI6Q6TGC4 694 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 KRBA2Q6ZNG9 492 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 UBE2Q1Q7Z7E8 422 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 CEP57L1Q8IYX8 460 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 GPT2Q8TD30 523 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 NRCAMQ92823 1304 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 ZBTB10Q96DT7 871 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 DHX33Q9H6R0 707 aaKnown RBP12.75□□□□□ -0.37
CAPN1-217ENST00000529133 MAGEF1Q9HAY2 307 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 DACT1Q9NYF0 836 aa12.75□□□□□ -0.37
CAPN1-217ENST00000529133 MBLAC1A4D2B0 266 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-217ENST00000529133 USO1O60763 962 aaKnown RBP12.74□□□□□ -0.37
CAPN1-217ENST00000529133 DGAT1O75907 488 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 CYP11B2P19099 503 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 CDK7P50613 346 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 POLGP54098 1239 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-217ENST00000529133 ATN1P54259 1190 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-217ENST00000529133 SOX10P56693 466 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 ZNF200P98182 395 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-217ENST00000529133 TBC1D8BQ0IIM8 1120 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 EMC2Q15006 297 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 SNX17Q15036 470 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 RINT1Q6NUQ1 792 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 MTHFD1LQ6UB35 978 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 SLC39A5Q6ZMH5 540 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 C1orf186Q6ZWK4 172 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 SV2BQ7L1I2 683 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 NECAB2Q7Z6G3 386 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 GPBP1Q86WP2 473 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 CNNM3Q8NE01 707 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 STAMQ92783 540 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 MTRQ99707 1265 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 SEZ6LQ9BYH1 1024 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 TNMDQ9H2S6 317 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 ATP6V0A4Q9HBG4 840 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 XPNPEP1Q9NQW7 623 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 BMP2KQ9NSY1 1161 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-217ENST00000529133 KBTBD4Q9NVX7 518 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 TUBE1Q9UJT0 475 aa12.74□□□□□ -0.37
CAPN1-217ENST00000529133 IGKV6-21A0A0C4DH24 114 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms