RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 CEP170P1Q96L14 293 aa27.53■■■□□ 2
LDLRAD3-203ENST00000528989 TUT1Q9H6E5 874 aaKnown RBP27.53■■■□□ 2
LDLRAD3-203ENST00000528989 ANKEF1Q9NU02 776 aa27.53■■■□□ 2
LDLRAD3-203ENST00000528989 ARHGEF35A5YM69 484 aa27.52■■■□□ 2
LDLRAD3-203ENST00000528989 MTFR1Q15390 333 aa27.52■■■□□ 2
LDLRAD3-203ENST00000528989 PADI6Q6TGC4 694 aa27.52■■■□□ 2
LDLRAD3-203ENST00000528989 C1orf186Q6ZWK4 172 aa27.52■■■□□ 2
LDLRAD3-203ENST00000528989 OTUD6AQ7L8S5 288 aa27.52■■■□□ 2
LDLRAD3-203ENST00000528989 SPATA20Q8TB22 786 aa27.52■■■□□ 2
LDLRAD3-203ENST00000528989 ERAP1Q9NZ08 941 aa27.52■■■□□ 2
LDLRAD3-203ENST00000528989 ADAMTS4O75173 837 aa27.51■■□□□ 1.99
LDLRAD3-203ENST00000528989 SARSP49591 514 aaKnown RBP27.51■■□□□ 1.99
LDLRAD3-203ENST00000528989 CHMP4BP1P59074 171 aa27.51■■□□□ 1.99
LDLRAD3-203ENST00000528989 MTERF2Q49AM1 385 aa27.51■■□□□ 1.99
LDLRAD3-203ENST00000528989 LHX8Q68G74 356 aa27.51■■□□□ 1.99
LDLRAD3-203ENST00000528989 KAT2BQ92831 832 aa27.51■■□□□ 1.99
LDLRAD3-203ENST00000528989 DNAJC19Q96DA6 116 aa27.51■■□□□ 1.99
LDLRAD3-203ENST00000528989 UNC93B1Q9H1C4 597 aa27.51■■□□□ 1.99
LDLRAD3-203ENST00000528989 CYP26B1Q9NR63 512 aa27.51■■□□□ 1.99
LDLRAD3-203ENST00000528989 MYL3P08590 195 aa27.51■■□□□ 1.99
LDLRAD3-203ENST00000528989 ASIC1P78348 528 aa27.51■■□□□ 1.99
LDLRAD3-203ENST00000528989 MAEAQ7L5Y9 396 aa27.51■■□□□ 1.99
LDLRAD3-203ENST00000528989 SMARCE1Q969G3 411 aa27.51■■□□□ 1.99
LDLRAD3-203ENST00000528989 UPF3AQ9H1J1 476 aaKnown RBP27.51■■□□□ 1.99
LDLRAD3-203ENST00000528989 TUBE1Q9UJT0 475 aa27.51■■□□□ 1.99
LDLRAD3-203ENST00000528989 MYH9P35579 1960 aaKnown RBP27.5■■□□□ 1.99
LDLRAD3-203ENST00000528989 ATP8B4Q8TF62 1192 aa27.5■■□□□ 1.99
LDLRAD3-203ENST00000528989 NIFKQ9BYG3 293 aaKnown RBP27.5■■□□□ 1.99
LDLRAD3-203ENST00000528989 NRBP2Q9NSY0 501 aa27.5■■□□□ 1.99
LDLRAD3-203ENST00000528989 KLRC4O43908 158 aa27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 USO1O60763 962 aaKnown RBP27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 GIT2Q14161 759 aa27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 NT5DC1Q5TFE4 455 aa27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 BBXQ8WY36 941 aaPredicted RBP27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 CCDC43Q96MW1 224 aaKnown RBP27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 CEP89Q96ST8 783 aa27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 REEP2Q9BRK0 252 aa27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 TRPC6Q9Y210 931 aa27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 RSPH10B2B2RC85 870 aa27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 ZBTB42B2RXF5 422 aa27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 LETM1O95202 739 aaPredicted RBP27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 RPN1P04843 607 aaKnown RBP27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 RSPH10BP0C881 870 aa27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 IDEP14735 1019 aa27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 SLC26A2P50443 739 aa27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 BRDTQ58F21 947 aaPredicted RBP27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 TRAPPC12Q8WVT3 735 aa27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 ZBTB10Q96DT7 871 aa27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 SPC25Q9HBM1 224 aa27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 MAN1B1Q9UKM7 699 aa27.49■■□□□ 1.99
LDLRAD3-203ENST00000528989 SFI1A8K8P3 1242 aa27.48■■□□□ 1.99
LDLRAD3-203ENST00000528989 KRT18P05783 430 aaKnown RBP27.48■■□□□ 1.99
LDLRAD3-203ENST00000528989 SOX10P56693 466 aa27.48■■□□□ 1.99
LDLRAD3-203ENST00000528989 TARBP2Q15633 366 aaKnown RBP27.48■■□□□ 1.99
LDLRAD3-203ENST00000528989 HPS3Q969F9 1004 aa27.48■■□□□ 1.99
LDLRAD3-203ENST00000528989 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.48■■□□□ 1.99
LDLRAD3-203ENST00000528989 F2P00734 622 aa27.47■■□□□ 1.99
LDLRAD3-203ENST00000528989 MYL1P05976 194 aa27.47■■□□□ 1.99
LDLRAD3-203ENST00000528989 BMP6P22004 513 aa27.47■■□□□ 1.99
LDLRAD3-203ENST00000528989 PURAQ00577 322 aaKnown RBP27.47■■□□□ 1.99
LDLRAD3-203ENST00000528989 KMT5BQ4FZB7 885 aa27.47■■□□□ 1.99
LDLRAD3-203ENST00000528989 KLHDC9Q8NEP7 349 aa27.47■■□□□ 1.99
LDLRAD3-203ENST00000528989 LRRC27Q9C0I9 530 aa27.47■■□□□ 1.99
LDLRAD3-203ENST00000528989 ZNF215Q9UL58 517 aaPredicted RBP27.47■■□□□ 1.99
LDLRAD3-203ENST00000528989 SMC2O95347 1197 aa27.47■■□□□ 1.99
LDLRAD3-203ENST00000528989 NKX3-2P78367 333 aa27.47■■□□□ 1.99
LDLRAD3-203ENST00000528989 KCNA10Q16322 511 aa27.47■■□□□ 1.99
LDLRAD3-203ENST00000528989 CXCL17Q6UXB2 119 aa27.47■■□□□ 1.99
LDLRAD3-203ENST00000528989 FAM167AQ96KS9 214 aa27.47■■□□□ 1.99
LDLRAD3-203ENST00000528989 INSRRP14616 1297 aa27.46■■□□□ 1.99
LDLRAD3-203ENST00000528989 KIAA0753Q2KHM9 967 aa27.46■■□□□ 1.99
LDLRAD3-203ENST00000528989 CCSAPQ6IQ19 270 aaPredicted RBP27.46■■□□□ 1.99
LDLRAD3-203ENST00000528989 CNNM4Q6P4Q7 775 aa27.46■■□□□ 1.99
LDLRAD3-203ENST00000528989 FBXO46Q6PJ61 603 aaPredicted RBP27.46■■□□□ 1.99
LDLRAD3-203ENST00000528989 GSDMAQ96QA5 445 aa27.46■■□□□ 1.99
LDLRAD3-203ENST00000528989 FUCA2Q9BTY2 467 aa27.46■■□□□ 1.99
LDLRAD3-203ENST00000528989 ZHX3Q9H4I2 956 aa27.46■■□□□ 1.99
LDLRAD3-203ENST00000528989 GPRC5CQ9NQ84 441 aa27.46■■□□□ 1.99
LDLRAD3-203ENST00000528989 HBP1O60381 514 aa27.45■■□□□ 1.99
LDLRAD3-203ENST00000528989 IGBP1P78318 339 aa27.45■■□□□ 1.99
LDLRAD3-203ENST00000528989 SASS6Q6UVJ0 657 aa27.45■■□□□ 1.99
LDLRAD3-203ENST00000528989 MSCO60682 206 aa27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 DAW1Q8N136 415 aa27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 RNF208Q9H0X6 261 aa27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 PDLIM7Q9NR12 457 aa27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 PANK4Q9NVE7 773 aa27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 HIP1RO75146 1068 aa27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 ASGR1P07306 291 aa27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 CCL5P13501 91 aa27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 GUCY2CP25092 1073 aa27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 TYRO3Q06418 890 aa27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 MFSD10Q14728 455 aa27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 LRRC41Q15345 812 aa27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 UNC13DQ70J99 1090 aa27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 SMYD4Q8IYR2 804 aaPredicted RBP27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 PAK6Q9NQU5 681 aaPredicted RBP27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 XPNPEP1Q9NQW7 623 aa27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 KCND2Q9NZV8 630 aa27.44■■□□□ 1.98
LDLRAD3-203ENST00000528989 DEFB118Q96PH6 123 aa27.43■■□□□ 1.98
LDLRAD3-203ENST00000528989 DGAT1O75907 488 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms