RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ATP6V0A4Q9HBG4 840 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 CYP26B1Q9NR63 512 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 RNF216Q9NWF9 866 aaPredicted RBP8.83□□□□□ -1
SSBP3-211ENST00000528787 LARSQ9P2J5 1176 aaKnown RBP8.83□□□□□ -1
SSBP3-211ENST00000528787 ODF2LQ9ULJ1 636 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 KIAA0100Q14667 2235 aaKnown RBP8.82□□□□□ -1
SSBP3-211ENST00000528787 ARVCFO00192 962 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 HAS3O00219 553 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 EML1O00423 815 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 WNT7AO00755 349 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 ADCY6O43306 1168 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 TBCAO75347 108 aaKnown RBP8.82□□□□□ -1
SSBP3-211ENST00000528787 PRPF40AO75400 957 aaKnown RBP8.82□□□□□ -1
SSBP3-211ENST00000528787 LETM1O95202 739 aaPredicted RBP8.82□□□□□ -1
SSBP3-211ENST00000528787 SLFN14P0C7P3 912 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 ZNF286BP0CG31 522 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 PFKFB1P16118 471 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 PPP1R2P41236 205 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 SMTNP53814 917 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 BEX3Q00994 111 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 NCBP1Q09161 790 aaKnown RBP8.82□□□□□ -1
SSBP3-211ENST00000528787 CTTNQ14247 550 aaKnown RBP8.82□□□□□ -1
SSBP3-211ENST00000528787 TMEM119Q4V9L6 283 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 FAM47CQ5HY64 1035 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 AXDND1Q5T1B0 1012 aaPredicted RBP8.82□□□□□ -1
SSBP3-211ENST00000528787 IER5Q5VY09 327 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 CXCL17Q6UXB2 119 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 SYT2Q8N9I0 419 aaPredicted RBP8.82□□□□□ -1
SSBP3-211ENST00000528787 CNNM3Q8NE01 707 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 CAGE1Q8TC20 777 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 RAD54LQ92698 747 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 ABHD8Q96I13 439 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 IFT74Q96LB3 600 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 MTRQ99707 1265 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 FTOQ9C0B1 505 aaKnown RBP eCLIP8.82□□□□□ -1
SSBP3-211ENST00000528787 SENP6Q9GZR1 1112 aaPredicted RBP8.82□□□□□ -1
SSBP3-211ENST00000528787 RMND1Q9NWS8 449 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 SEL1LQ9UBV2 794 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 PRKAG2Q9UGJ0 569 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 GTF2IRD1Q9UHL9 959 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 TUBE1Q9UJT0 475 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 MYH11P35749 1972 aa8.82□□□□□ -1
SSBP3-211ENST00000528787 SMIM35A0A1B0GVV1 85 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 POTEFA5A3E0 1075 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 POLR2DO15514 142 aaKnown RBP8.81□□□□□ -1
SSBP3-211ENST00000528787 MED24O75448 989 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 MYCP01106 439 aaPredicted RBP8.81□□□□□ -1
SSBP3-211ENST00000528787 PLA2G4BP0C869 781 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 SPATA31C1P0DKV0 1188 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 SMIM10L2AP0DMW4 78 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 SMIM10L2BP0DMW5 78 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 GAP43P17677 238 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 PLCG1P19174 1290 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 GUCY2CP25092 1073 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 MARK3P27448 753 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 RARRES1P49788 294 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 RTP1P59025 263 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 PTK7Q13308 1070 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 ALCAMQ13740 583 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 KARSQ15046 597 aaKnown RBP8.81□□□□□ -1
SSBP3-211ENST00000528787 PLCB4Q15147 1175 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 GRIK4Q16099 956 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 IL17AQ16552 155 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 NBPF20Q3BBV1 942 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 POTEGQ6S5H5 508 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 SHC4Q6S5L8 630 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 PADI6Q6TGC4 694 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 ANKRD33Q7Z3H0 272 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 APBB1IPQ7Z5R6 666 aaPredicted RBP8.81□□□□□ -1
SSBP3-211ENST00000528787 RPAINQ86UA6 219 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 CCDC65Q8IXS2 484 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 USP38Q8NB14 1042 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 PSPC1Q8WXF1 523 aaKnown RBP8.81□□□□□ -1
SSBP3-211ENST00000528787 EPSTI1Q96J88 318 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 CLIC6Q96NY7 704 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 C2orf40Q9H1Z8 148 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 BHMT2Q9H2M3 363 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 RGL1Q9NZL6 768 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 PCDHA2Q9Y5H9 948 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 COL4A3BPQ9Y5P4 624 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 DDX49Q9Y6V7 483 aaKnown RBP8.81□□□□□ -1
SSBP3-211ENST00000528787 ARID2Q68CP9 1835 aa8.81□□□□□ -1
SSBP3-211ENST00000528787 PVALEFA0A1B0GWK0 134 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 MBLAC1A4D2B0 266 aaPredicted RBP8.8□□□□□ -1
SSBP3-211ENST00000528787 SORBS3O60504 671 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 MAFO75444 373 aaPredicted RBP8.8□□□□□ -1
SSBP3-211ENST00000528787 ZNF202O95125 648 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 SSBP05455 408 aaKnown RBP eCLIP8.8□□□□□ -1
SSBP3-211ENST00000528787 COL6A1P12109 1028 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 INSRRP14616 1297 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 CYP11B2P19099 503 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 MCM4P33991 863 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 EFNA5P52803 228 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 CHMP4BP1P59074 171 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 POU5F1BQ06416 359 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 PSMD2Q13200 908 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 DMP1Q13316 513 aaPredicted RBP8.8□□□□□ -1
SSBP3-211ENST00000528787 EMC2Q15006 297 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 SNX17Q15036 470 aa8.8□□□□□ -1
SSBP3-211ENST00000528787 PTGISQ16647 500 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms