RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 GLT8D2Q9H1C3 349 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 C6orf50Q9HD87 102 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 ALG13Q9NP73 1137 aaKnown RBP13.12□□□□□ -0.31
SRPRA-203ENST00000528744 C11orf16Q9NQ32 467 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 HCSTQ9UBK5 93 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 GINS2Q9Y248 185 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 SQORQ9Y6N5 450 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 ADGRA3Q8IWK6 1321 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 KDM3AQ9Y4C1 1321 aa13.12□□□□□ -0.31
SRPRA-203ENST00000528744 GRXCR2A6NFK2 248 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 M0R2N6 131 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 GPR32O75388 356 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 STBD1O95210 358 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 C22orf31O95567 290 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 IBSPP21815 317 aaPredicted RBP13.11□□□□□ -0.31
SRPRA-203ENST00000528744 IRS1P35568 1242 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 HYAL1Q12794 435 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 NFX1Q12986 1120 aaKnown RBP13.11□□□□□ -0.31
SRPRA-203ENST00000528744 BTG3Q14201 252 aaPredicted RBP13.11□□□□□ -0.31
SRPRA-203ENST00000528744 UGCGQ16739 394 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 PAN2Q504Q3 1202 aaKnown RBP13.11□□□□□ -0.31
SRPRA-203ENST00000528744 FAM102BQ5T8I3 360 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 MIS18BP1Q6P0N0 1132 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 REXO1Q8N1G1 1221 aaKnown RBP13.11□□□□□ -0.31
SRPRA-203ENST00000528744 NME8Q8N427 588 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 LINC01465Q8N7H1 131 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 SPPL3Q8TCT6 385 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 ZNF668Q96K58 619 aaPredicted RBP13.11□□□□□ -0.31
SRPRA-203ENST00000528744 RNF26Q9BY78 433 aaPredicted RBP13.11□□□□□ -0.31
SRPRA-203ENST00000528744 UPF3BQ9BZI7 483 aaKnown RBP13.11□□□□□ -0.31
SRPRA-203ENST00000528744 GABBR1Q9UBS5 961 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 ST3GAL5Q9UNP4 418 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 PLAGL2Q9UPG8 496 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 PCDHGC5Q9Y5F6 944 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 TTC3P53804 2025 aa13.11□□□□□ -0.31
SRPRA-203ENST00000528744 COL4A4P53420 1690 aaPredicted RBP13.1□□□□□ -0.31
SRPRA-203ENST00000528744 LINC01565O15544 149 aa13.1□□□□□ -0.31
SRPRA-203ENST00000528744 VTNP04004 478 aa13.1□□□□□ -0.31
SRPRA-203ENST00000528744 ITGB1P05556 798 aa13.1□□□□□ -0.31
SRPRA-203ENST00000528744 RB1P06400 928 aa13.1□□□□□ -0.31
SRPRA-203ENST00000528744 SLC26A2P50443 739 aa13.1□□□□□ -0.31
SRPRA-203ENST00000528744 KIZQ2M2Z5 673 aa13.1□□□□□ -0.31
SRPRA-203ENST00000528744 CTC1Q2NKJ3 1217 aa13.1□□□□□ -0.31
SRPRA-203ENST00000528744 ZNF484Q5JVG2 852 aa13.1□□□□□ -0.31
SRPRA-203ENST00000528744 ZNF746Q6NUN9 644 aaPredicted RBP13.1□□□□□ -0.31
SRPRA-203ENST00000528744 FAM228AQ86W67 206 aa13.1□□□□□ -0.31
SRPRA-203ENST00000528744 FAM178BQ8IXR5 827 aa13.1□□□□□ -0.31
SRPRA-203ENST00000528744 NSUN3Q9H649 340 aaKnown RBP13.1□□□□□ -0.31
SRPRA-203ENST00000528744 GJB4Q9NTQ9 266 aa13.1□□□□□ -0.31
SRPRA-203ENST00000528744 TBC1D22BQ9NU19 505 aa13.1□□□□□ -0.31
SRPRA-203ENST00000528744 PCDHA10Q9Y5I2 948 aa13.1□□□□□ -0.31
SRPRA-203ENST00000528744 SIP14410 1827 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 TMEM150BA6NC51 233 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 C9IYK1 514 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 TDP2O95551 362 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 PSMA5P28066 241 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 GNA11P29992 359 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 CLCN3P51790 818 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 FAM189BP81408 668 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 PAK2Q13177 524 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 STK3Q13188 491 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 DRP2Q13474 957 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 DSC3Q14574 896 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 PTPROQ16827 1216 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 FAM160B1Q5W0V3 765 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 PTCRAQ6ISU1 281 aaPredicted RBP13.09□□□□□ -0.31
SRPRA-203ENST00000528744 B3GNT9Q6UX72 402 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 ADGRD2Q7Z7M1 963 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 NPAS4Q8IUM7 802 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 LRRC71Q8N4P6 559 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 KLHL23Q8NBE8 558 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 TBCKQ8TEA7 893 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 BBXQ8WY36 941 aaPredicted RBP13.09□□□□□ -0.31
SRPRA-203ENST00000528744 KAT6AQ92794 2004 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 SLC5A5Q92911 643 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 PABPC5Q96DU9 382 aaKnown RBP13.09□□□□□ -0.31
SRPRA-203ENST00000528744 CEP89Q96ST8 783 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 OSMRQ99650 979 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 ADAM2Q99965 735 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 LRFN3Q9BTN0 628 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 ADAMTS10Q9H324 1103 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 UNC45AQ9H3U1 944 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 RNF19AQ9NV58 838 aa13.09□□□□□ -0.31
SRPRA-203ENST00000528744 RPS6KA5O75582 802 aa13.08□□□□□ -0.32
SRPRA-203ENST00000528744 PSMD10O75832 226 aa13.08□□□□□ -0.32
SRPRA-203ENST00000528744 NLRP5P59047 1200 aa13.08□□□□□ -0.32
SRPRA-203ENST00000528744 AKAP17AQ02040 695 aaKnown RBP13.08□□□□□ -0.32
SRPRA-203ENST00000528744 EP400NLQ6ZTU2 488 aa13.08□□□□□ -0.32
SRPRA-203ENST00000528744 CKAP2LQ8IYA6 745 aa13.08□□□□□ -0.32
SRPRA-203ENST00000528744 CMTR2Q8IYT2 770 aaKnown RBP13.08□□□□□ -0.32
SRPRA-203ENST00000528744 METTL13Q8N6R0 699 aa13.08□□□□□ -0.32
SRPRA-203ENST00000528744 TNPO1Q92973 898 aaKnown RBP13.08□□□□□ -0.32
SRPRA-203ENST00000528744 ZNF274Q96GC6 653 aaPredicted RBP13.08□□□□□ -0.32
SRPRA-203ENST00000528744 SH2D3AQ9BRG2 576 aa13.08□□□□□ -0.32
SRPRA-203ENST00000528744 FTHL17Q9BXU8 183 aa13.08□□□□□ -0.32
SRPRA-203ENST00000528744 IGFLR1Q9H665 355 aa13.08□□□□□ -0.32
SRPRA-203ENST00000528744 DISC1Q9NRI5 854 aa13.08□□□□□ -0.32
SRPRA-203ENST00000528744 RGS18Q9NS28 235 aa13.08□□□□□ -0.32
SRPRA-203ENST00000528744 CLDND1Q9NY35 253 aa13.08□□□□□ -0.32
SRPRA-203ENST00000528744 KCNJ14Q9UNX9 436 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms