RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 TMEM260Q9NX78 707 aa13.18□□□□□ -0.3
CMTM1-211ENST00000528484 NR2E1Q9Y466 385 aa13.18□□□□□ -0.3
CMTM1-211ENST00000528484 PER2O15055 1255 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 HOXA2O43364 376 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 HBP1O60381 514 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 GLP2RO95838 553 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 FOSP01100 380 aaPredicted RBP13.17□□□□□ -0.3
CMTM1-211ENST00000528484 GATMP50440 423 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 ANTXR2P58335 489 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 DUSP6Q16828 381 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 IER5LQ5T953 404 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 CKAP2LQ8IYA6 745 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 ABI1Q8IZP0 508 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 CRIPAKQ8N1N5 446 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 CCDC82Q8N4S0 544 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 ATOH1Q92858 354 aaPredicted RBP13.17□□□□□ -0.3
CMTM1-211ENST00000528484 ZBTB10Q96DT7 871 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 SNX27Q96L92 541 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 ADAM2Q99965 735 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 GLT8D2Q9H1C3 349 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 NGRNQ9NPE2 291 aaKnown RBP13.17□□□□□ -0.3
CMTM1-211ENST00000528484 COL1A2P08123 1366 aa13.17□□□□□ -0.3
CMTM1-211ENST00000528484 SGSM2O43147 1006 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 GFRA3O60609 400 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 GSPT1P15170 499 aaKnown RBP13.16□□□□□ -0.3
CMTM1-211ENST00000528484 HOXB8P17481 243 aaPredicted RBP13.16□□□□□ -0.3
CMTM1-211ENST00000528484 KLRC1P26715 233 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 PPM1AP35813 382 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 TECP42680 631 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 LIFRP42702 1097 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 NUBP1P53384 320 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 NAPAP54920 295 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 KRT17Q04695 432 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 PTPN21Q16825 1174 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 CEP55Q53EZ4 464 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 ZNF484Q5JVG2 852 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 PLPP4Q5VZY2 271 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 CES5AQ6NT32 575 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 PDXDC2PQ6P474 469 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 CMTR1Q8N1G2 835 aaKnown RBP13.16□□□□□ -0.3
CMTM1-211ENST00000528484 COLGALT1Q8NBJ5 622 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 PCYT2Q99447 389 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 TMX1Q9H3N1 280 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 ERVK-5Q9HDB9 667 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 RGS18Q9NS28 235 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 ST3GAL5Q9UNP4 418 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 LZTS1Q9Y250 596 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 RBM8AQ9Y5S9 174 aaKnown RBP13.16□□□□□ -0.3
CMTM1-211ENST00000528484 PLXNA4Q9HCM2 1894 aa13.16□□□□□ -0.3
CMTM1-211ENST00000528484 DMDP11532 3685 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 hCG_1642624A0A1W2PR95 340 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 SH2B2O14492 632 aaPredicted RBP13.15□□□□□ -0.3
CMTM1-211ENST00000528484 RXRAP19793 462 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 TPRNQ4KMQ1 711 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 PPP1R18Q6NYC8 613 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 MIS18BP1Q6P0N0 1132 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 MICU3Q86XE3 530 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 TMEM87AQ8NBN3 555 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 ATP8B4Q8TF62 1192 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 SUSD6Q92537 303 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 MAP4K1Q92918 833 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 PHOX2BQ99453 314 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 TCF25Q9BQ70 676 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 ELAC1Q9H777 363 aaKnown RBP13.15□□□□□ -0.3
CMTM1-211ENST00000528484 TSHZ2Q9NRE2 1034 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 TYW1Q9NV66 732 aaKnown RBP13.15□□□□□ -0.3
CMTM1-211ENST00000528484 RBM28Q9NW13 759 aaKnown RBP13.15□□□□□ -0.3
CMTM1-211ENST00000528484 TMEM161AQ9NX61 479 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 CEP131Q9UPN4 1083 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 NOC2LQ9Y3T9 749 aaKnown RBP13.15□□□□□ -0.3
CMTM1-211ENST00000528484 PCDHGC5Q9Y5F6 944 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 TAF6LQ9Y6J9 622 aa13.15□□□□□ -0.3
CMTM1-211ENST00000528484 FNDC1Q4ZHG4 1894 aaPredicted RBP13.14□□□□□ -0.31
CMTM1-211ENST00000528484 hCG_1984214I3L0E3 225 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 DDX39AO00148 427 aaKnown RBP13.14□□□□□ -0.31
CMTM1-211ENST00000528484 ZSCAN20P17040 1043 aaPredicted RBP13.14□□□□□ -0.31
CMTM1-211ENST00000528484 AVPR2P30518 371 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 CA8P35219 290 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 ADCY7P51828 1080 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 CRYBB1P53674 252 aaPredicted RBP13.14□□□□□ -0.31
CMTM1-211ENST00000528484 ERVFC1P60507 584 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 PLCB3Q01970 1234 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 TCF15Q12870 199 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 AP3B2Q13367 1082 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 FAM102BQ5T8I3 360 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 ANKRD54Q6NXT1 300 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 LLGL2Q6P1M3 1020 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 TMTC3Q6ZXV5 915 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 TMC7Q7Z402 723 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 UBALD2Q8IYN6 164 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 LRRC43Q8N309 656 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 METTL13Q8N6R0 699 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 ZNF713Q8N859 430 aaPredicted RBP13.14□□□□□ -0.31
CMTM1-211ENST00000528484 FANCBQ8NB91 859 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 EXOC6Q8TAG9 804 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 RASGRP4Q8TDF6 673 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 MRPS27Q92552 414 aaKnown RBP13.14□□□□□ -0.31
CMTM1-211ENST00000528484 CASP10Q92851 521 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 ZNF558Q96NG5 402 aa13.14□□□□□ -0.31
CMTM1-211ENST00000528484 NECTIN4Q96NY8 510 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms