RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 CEBPZQ03701 1054 aaKnown RBP13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 MFSD10Q14728 455 aa13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 CALCRLQ16602 461 aa13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 TCTN1Q2MV58 587 aa13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 LRCH2Q5VUJ6 765 aa13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 HERC6Q8IVU3 1022 aa13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 HAS1Q92839 578 aa13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 SLC5A5Q92911 643 aa13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 EMID1Q96A84 441 aaPredicted RBP13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 SDF4Q9BRK5 362 aa13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 HDAC6Q9UBN7 1215 aa13.02□□□□□ -0.33
CCDC90B-210ENST00000528149 HAS3O00219 553 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 MAFGO15525 162 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 DHX15O43143 795 aaKnown RBP13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 CHMP2AO43633 222 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 GAS7O60861 476 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 F2P00734 622 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 PFKMP08237 780 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 OR52Z1P0C646 297 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 NUCB2P80303 420 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 NEDD9Q14511 834 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 KIAA0753Q2KHM9 967 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 METTL7BQ6UX53 244 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 USP28Q96RU2 1077 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 SENP7Q9BQF6 1050 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 JPH1Q9HDC5 661 aaPredicted RBP13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 POLR3EQ9NVU0 708 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 SLC9A2Q9UBY0 812 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 CIZ1Q9ULV3 898 aaPredicted RBP13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 CLIC4Q9Y696 253 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 NFASCO94856 1347 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 SIP14410 1827 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 CACNA1BQ00975 2339 aa13.01□□□□□ -0.33
CCDC90B-210ENST00000528149 TET1Q8NFU7 2136 aa13□□□□□ -0.33
CCDC90B-210ENST00000528149 LCHNA4D1U4 455 aa13□□□□□ -0.33
CCDC90B-210ENST00000528149 GRXCR2A6NFK2 248 aa13□□□□□ -0.33
CCDC90B-210ENST00000528149 MARCH6O60337 910 aa13□□□□□ -0.33
CCDC90B-210ENST00000528149 PSMD10O75832 226 aa13□□□□□ -0.33
CCDC90B-210ENST00000528149 TCF7P36402 384 aaPredicted RBP13□□□□□ -0.33
CCDC90B-210ENST00000528149 DNM1Q05193 864 aaKnown RBP13□□□□□ -0.33
CCDC90B-210ENST00000528149 PTGDRQ13258 359 aa13□□□□□ -0.33
CCDC90B-210ENST00000528149 ORC2Q13416 577 aaPredicted RBP13□□□□□ -0.33
CCDC90B-210ENST00000528149 LAMC2Q13753 1193 aa13□□□□□ -0.33
CCDC90B-210ENST00000528149 SF3A1Q15459 793 aaKnown RBP13□□□□□ -0.33
CCDC90B-210ENST00000528149 DGKDQ16760 1214 aa13□□□□□ -0.33
CCDC90B-210ENST00000528149 C4orf32Q8N8J7 132 aa13□□□□□ -0.33
CCDC90B-210ENST00000528149 TRAPPC12Q8WVT3 735 aa13□□□□□ -0.33
CCDC90B-210ENST00000528149 TEKT3Q9BXF9 490 aa13□□□□□ -0.33
CCDC90B-210ENST00000528149 UNC45AQ9H3U1 944 aa13□□□□□ -0.33
CCDC90B-210ENST00000528149 LMCD1Q9NZU5 365 aa13□□□□□ -0.33
CCDC90B-210ENST00000528149 TFIP11Q9UBB9 837 aaKnown RBP13□□□□□ -0.33
CCDC90B-210ENST00000528149 EVPLQ92817 2033 aa13□□□□□ -0.33
CCDC90B-210ENST00000528149 MYO15AQ9UKN7 3530 aa12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 RIF1Q5UIP0 2472 aaKnown RBP12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 NOP56O00567 594 aaKnown RBP12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 TBX3O15119 743 aa12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 ZEB2O60315 1214 aa12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 TXKP42681 527 aa12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 ACTR2P61160 394 aa12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 ATP2C1P98194 919 aaPredicted RBP12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 SLFN12Q8IYM2 578 aa12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 GIMAP8Q8ND71 665 aaPredicted RBP12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 PHOSPHO2Q8TCD6 241 aa12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 MFSD14AQ96MC6 490 aa12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 FAM20AQ96MK3 541 aa12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 ZNF396Q96N95 335 aaPredicted RBP12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 MTMR9Q96QG7 549 aa12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 RIT2Q99578 217 aa12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 RNPEPQ9H4A4 650 aa12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 TBC1D22BQ9NU19 505 aa12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 CHMP5Q9NZZ3 219 aa12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 TCEAL9Q9UHQ7 104 aa12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 VAV3Q9UKW4 847 aa12.99□□□□□ -0.33
CCDC90B-210ENST00000528149 DCHS1Q96JQ0 3298 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 POTEMA6NI47 508 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 GFRA3O60609 400 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 CABYRO75952 493 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 BAG4O95429 457 aaKnown RBP12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 SMIM10L2AP0DMW4 78 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 SMIM10L2BP0DMW5 78 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 ACTN1P12814 892 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 NCLP19338 710 aaKnown RBP12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 PTPN5P54829 565 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 ZP2Q05996 745 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 GPNMBQ14956 572 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 PTPAQ15257 358 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 UGCGQ16739 394 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 IER5LQ5T953 404 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 NCAPH2Q6IBW4 605 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 RUFY4Q6ZNE9 571 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 CCDC60Q8IWA6 550 aaPredicted RBP12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 TTC12Q9H892 705 aaPredicted RBP12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 SETD4Q9NVD3 440 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 MTUS1Q9ULD2 1270 aa12.98□□□□□ -0.33
CCDC90B-210ENST00000528149 TMEM150BA6NC51 233 aa12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 H3BQ06 376 aaPredicted RBP12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 EML1O00423 815 aa12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 TREHO43280 583 aa12.97□□□□□ -0.33
CCDC90B-210ENST00000528149 BMP15O95972 392 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms